Lethenteron reissneri (Far Eastern brook lamprey): 133354920
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Entry
133354920 CDS
T09663
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133354920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133354920
03036 Chromosome and associated proteins [BR:
lrj03036
]
133354920
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133354920
Coactivators
SAGA/TFTC/STAGA complex
133354920
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133354920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
133354920
NCBI-ProteinID:
XP_061428093
LinkDB
All DBs
Position
49:7231448..7250676
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AA seq
600 aa
AA seq
DB search
MGGDLWLVPTRRYGDGARRRAGPALPHPAVGAGAGRWRRPPRRPRAPLPHRGHGGARPQP
TGRQPRHSTAAGSAAGRAADCIGDAAGGGAPTLAAATPAPPAGPALPASQPPLVFTPEVM
ENVKKCKNFLSTLIKLASSGQQSPETTRNVKELVQNLLDAKMEPEEFTSRLQKELKSSPQ
PYLVPFLKKSLPAVRYLAQNPQAPTQSAPQLNAIGPPATSTGAARPLGAQTHAAQAPLHT
VLTTQHGGGVKQIVLQSQARGSTHIKPGTVVKTQGPALIRPPPTGVPGATGLQASASQKG
KMKDPGGGTFKDDDDINDVASMAGVNINEESARIAATGSDTVGTQIRSCRDEAFLSAGPL
QRRLLDIGRRYGVTEVPADVVGLVSHAAQERLKNLVERLSVIAQHRTETYRDSDDSEQMS
DVRSQLRFFEQLDRLEKQRKDEQEREILLRAAKSRSRQEDPEQARLKQKAKEMQQAELAQ
MRQREANLTALAAIGPRKKRKLDSPGPGTPGEAGGGGPGASSSGGTGAAGGSGGGAAEAV
AGPGGGGGGGGGGGGGVPGTPTRPSQRARFTRVNLRDLVFLLEQDRETAHSRVLYRAQLK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggggggatctttggcttgtgcccacccgcaggtacggtgatggtgcgcgccggcga
gcagggccagctcttcctcatccagcagtcggtgctggcgcaggccggtggcgccgcccc
ccacgccgcccccgtgcccccctcccccaccgtggccacggtggcgcacgcccccagccc
accggccgccagccccgccactcaaccgcagcagggagtgcggctggccgcgctgcagat
tgcatcggtgacgccgccggtgggggggcacccacgctcgccgctgccacgccggcccct
cccgcagggcccgctcttcccgccagccagcctccgctcgtcttcacgccggaggtgatg
gagaacgtcaagaagtgcaagaacttcctctcgacgctcatcaagctggcgtcgtccggc
cagcagtcgcccgagacgacgcgcaacgtcaaggagctggtgcaaaacctcctggatgcc
aagatggaaccggaggagttcacatcgcggctgcagaaggagctcaagtcgtcgccacag
ccctacctcgtgcccttcctcaagaaaagcctgccggccgtgcgctacctggcgcagaac
ccgcaagcgccgacccagtcggccccgcagctcaacgcgatcggacccccggcgacctcg
accggcgccgcgcgacccctgggagcgcagacgcacgcggcgcaggcaccgctacacacg
gttctgacgacgcagcatgggggtggagtgaagcagattgtgctgcagtcgcaggctcgc
ggcagtacacacatcaagcccggcacggtggtcaagactcagggccctgctctcatcagg
ccaccccccacaggcgtgccgggagccaccgggctgcaggcatcggcgagccagaagggg
aagatgaaggatcctgggggcggcactttcaaggacgatgacgacatcaacgacgtcgcc
tccatggcgggcgtgaacatcaacgaggagagcgcacgcatcgcggccacgggctccgac
acggtggggacgcagatccgctcgtgccgtgacgaggccttcctgtcggcagggcccctc
cagcgccgcctgctcgacattggccggcggtacggcgtgacggaggtgcctgcggacgtg
gtggggttggtgtcgcacgcggcgcaggagaggctcaagaacctggtggagaggctgagc
gtcatcgcacagcaccgcacggagacgtacagggactcggacgactcggagcagatgagc
gacgtgaggtctcagctgaggttcttcgagcagctcgaccgcctggagaagcagcgcaag
gatgagcaggagcgcgagattctactcagggcggccaagagtcggtctcgacaagaagac
ccagaacaagcccggctcaagcagaaagcaaaagagatgcagcaagcggagctggctcag
atgcgccagcgagaagcgaacctgacggcgctcgcggcaatcgggccacgcaagaagcgg
aaactcgattcgccagggccgggcacgccgggggaggccgggggtggggggcccggcgct
tcgtcttccggcggcaccggcgcggcgggaggcagcggcgggggggcggcggaggccgtc
gcggggcccggcggcggcggtggcggcggcggcggcggcggcggcggggtgccgggcacg
ccgacgagaccgtcgcagcgagcgcgcttcaccagggtcaacctgcgcgacctcgtcttc
ttgctggaacaagatcgcgagacggcgcactcgcgcgtgctgtaccgcgcgcagctcaag
tga
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