Lethenteron reissneri (Far Eastern brook lamprey): 133355805
Help
Entry
133355805 CDS
T09663
Name
(RefSeq) beta-1-syntrophin-like
KO
K24064
beta-syntrophin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133355805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
TetR_C_22
Motif
Other DBs
NCBI-GeneID:
133355805
NCBI-ProteinID:
XP_061429169
LinkDB
All DBs
Position
52:9211384..9249069
Genome browser
AA seq
546 aa
AA seq
DB search
MASTGRVRGAQRSGLLEVLVRDGGWCRVLATLGEDSLTLSAEEAAAATNNGGGGVGPGAG
VESSFNGLNGPPSTSPQQGRGPAEDEGPEEAVPESIANIKRVVRVLKQEVGGLGISIKGG
KENKMPVLISKIFKGLAAEQTGGLYVGDAILSVNGADLRDATHDEAVQALKRAGREVVLE
VKYLREVTPYFKKGSPIGELGWEVAPPLTPKPSLAVAAAAGNAAGGSPDAGVHDAAKDKK
RIPLKMCFVTRNLSKPDPENRLIELHSPDSAHTIVLRCRDSAGAHAWFGSLHANAAALTQ
AAVREANQLLQAAGGGGGGGNWGPVQHMGWLAQQVTAEGHSQWKAVLMVLTDRDLALHQT
MPWTREAWAAPLVSHPLLATRLVHSGALHGSPPPPHTELTFATRTGSRHGVETRVFRAET
NRELAAWTRLIVQGCHTAAELIKEVSVACKLRDADCTLSIHFEEGFCLSRDGGGGSVGGA
AAPTPILRYPFERLRMSSDDGDHALFLDFGGPEGELQLDLRSCPKPVVFILHSFLSAKVT
RLGLFA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggggcgcgtgcgcggggcccaacggagcggcctgctggaggtgctggtg
cgggacggcggctggtgccgagtcctggccacgctcggcgaggacagcctcacgctgagc
gctgaggaggctgccgccgccaccaacaacggcggcggcggtgttggcccgggggcgggt
gtcgagagcagcttcaacggcctcaacggccctccgtcgacatccccgcagcaaggacgc
ggcccggcggaggacgaggggcctgaggaggccgtgcccgagtcgatcgccaacatcaag
cgggtggtgcgcgtcctcaagcaggaggtcggcggcctgggcatcagcatcaagggcggc
aaggagaacaagatgcccgtgctcatctcgaagatcttcaaggggctggcggccgagcag
acgggcggcctgtacgtgggcgacgccatcctgtcggtgaacggcgcggacctgcgcgac
gccactcacgacgaggccgtgcaggcgctcaagagggccggacgcgaggttgtgctggaa
gtcaagtacctgcgcgaggtgacgccctacttcaagaagggctctcccatcggagagctg
ggctgggaggtggcgcctccgctcacgcccaagcccagcctcgcggtggcggcagcggcc
ggcaacgcggcgggcggctcgccggacgcgggggtccacgacgccgccaaggacaagaag
cggatcccgctcaagatgtgcttcgtcacgcgcaacctcagcaagccggaccccgagaac
aggctgatcgagctgcactcgccagacagcgctcacaccatcgtgctgcgctgccgcgac
tctgccggcgcccacgcgtggttcggctcgctgcacgccaacgcggccgccctgacgcag
gccgcggtgcgagaggccaaccagctgctgcaggccgccggcggtggcggcggcggcggc
aactggggaccggtgcagcacatgggctggctggcgcagcaggtgacggcagagggccac
tcgcagtggaaggccgtgctcatggtgctcaccgacagagacctggcgctgcaccagacg
atgccgtggacgcgcgaggcgtgggcggcgcccctcgtcagccacccgctgctcgccacg
cggctggtgcactcaggggcactgcatggctctcccccgccgccccacacggagctgacg
tttgcgactcgcacgggctcgcggcacggcgtggagacgcgcgtcttccgcgccgagacg
aaccgcgagttggcggcgtggacgcggctcatcgtgcagggctgccacactgccgccgag
ctcatcaaggaggtgtccgtggcgtgcaagctgcgcgacgccgactgcacgctgagcatc
cactttgaggagggcttctgcctgagccgcgacggcgggggaggctcagtggggggggcg
gcggcgccgacgcccatcctgcgctacccgttcgagcgcctgcgcatgtcgtccgacgat
ggggaccacgccctcttccttgacttcggtggccccgagggcgagctgcagctggacctg
cgctcgtgccccaagcccgtggtgttcatcctccactcgttcctctccgccaaggtgacg
cggctcggcctgttcgcgtga
DBGET
integrated database retrieval system
