Lethenteron reissneri (Far Eastern brook lamprey): 133355862
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Entry
133355862 CDS
T09663
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133355862 (CTDP1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133355862 (CTDP1)
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133355862 (CTDP1)
Protein phosphatases and associated proteins [BR:
lrj01009
]
HAD phosphatases
Fcp/Scp phosphatases
133355862 (CTDP1)
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133355862 (CTDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
NIF
BSH_Fcp1
BRCT
PTCB-BRCT
LIG3_BRCT
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
133355862
NCBI-ProteinID:
XP_061429257
LinkDB
All DBs
Position
52:3788848..3814074
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AA seq
1125 aa
AA seq
DB search
MAEAGVVRVPGTLRAVRLLEWKVAPGSAVRMGSVVAHVAAVEDSGGGGGRDEEDAATVAP
EADEAKDEQAATTVSPGRSAREVKLKASSAGVVVRLCCAPGQIVASGGELLRLEACRHPI
VMKGLCAECGQDLRRLAKAGGQTQVSSSAANISMVHSVPELMVTSEQAESLGREDQQRLL
RSRKLVLMVDLDQTLIHTTEQSYPHMSSKGIFHFQLGQGQPMLHTRLRPHCRSFLQKIAE
LYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPYCKTGNLKNLFPCGDSMV
CIIDDREDVWRSAPNLIAVRKYVYFQGTGDINAPPGSREAQRRGNNVAKVTPESSSQASA
ESPNAVSSRGPAERAPERVAKCPPAAETDGSGKATAVAAVDSRLKPAADKAPAAPTNNGT
GRCGSAKDATFRDGAKEPVTAVSTVTDDGTAAASLKEEESRAGADVADVGAEPKQNNEKR
GDAGSGAQADLDFDLSSDSDSPSSPSAALKEEGEAVAPPTSGGGDDDVRTLKADVKADVK
ADAKADAVRLDAEMAAPLCGGVRSGRDATKEEEAGGREERLGEAAGPCVLACEPEVVGEN
GGGGGGGGAGGGVETRHDTVDIASQNTEQSGITEGESFEPEFDVEEEEGKAHEGAAVVVV
DAAAAEVDDKEEDDYLLHLEEVLSRVHAMFYVQQDRWQQQQQGGGRQGESEPAGAVVEPD
LRSVVPELRRSVLRGVVVVFSGVFPTNCPADRTREYRVASALGAIVSSSLVLDASGAQCA
TTHLVAAKAGTDKVRRALESRRVRVVTPDWLWACADRWDHVEECLFTLTEGYTRTHRSSS
PATYTEAGASDGTRHALLHPTPMHPRGSTAPAPPEARVYDPVTGRLLRKGSVQSCAPGAS
SWQGQQQQQQRKERQERQERQLLQQKQQQQQLQVPSITPAPAGGLGHDDHSPFRCLSQQQ
VRDAPEGSRRQRQPSMSEALPLYTLSKDDLDSMDKEVDDILGEESDGEEEQEEEVEEEEE
EETAEKAEVAGGSSARSGAPSVSEMEVERGAGGRAPPQSKEELGTLIERPPSSSSGGSLE
GSVPRGHKRRRDESEEEEEEEEPEGSSSEADEMAAALDAELDNFM
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccggcgttgttcgagtgcccggtacgcttcgtgctgtgcgcctcttggag
tggaaagtggctcccggctcggccgtacgcatgggttcggtggtggcgcatgtggcggcg
gtggaggacagcggcggtggtggcggcagggacgaggaagacgcggcgacggtggcgccc
gaggcggacgaggcgaaggatgagcaggccgcgaccacggtctcgcctgggcgctctgcc
cgcgaggtgaagctgaaggcgagcagcgctggcgtcgtcgtgcgcctctgctgcgcgccc
ggacaaatagtggcctcgggaggagagctgctgcggctggaggcttgtcgccatcccatt
gtgatgaagggactctgtgccgagtgtggacaggacctcaggaggttggcgaaggcaggc
ggacagacgcaggtttcgagttccgcagccaacatctctatggttcacagcgtgcccgag
ctcatggtcacatccgagcaagccgagagcctgggacgtgaggatcagcagcggctgttg
cggagccgcaagctggtgctcatggtagatttggaccagacgctcatccacacgacggag
cagagctacccgcacatgagcagcaagggaatcttccacttccagcttggccagggtcag
ccgatgctgcacacgcgactgcggccccactgccgctccttcctgcagaagatcgccgag
ctctacgagctacacgtcttcacctttggcagccgcctctacgcacacaccatcgctggg
tttttggatccggagaagaagcttttttcgcacagaatcctttcccgagacgagtgcata
gatccctactgcaaaaccggcaacctcaaaaacctttttccgtgcggtgactcgatggtg
tgcatcatcgatgaccgcgaagatgtgtggaggtcggcacccaatctgattgccgtgcgg
aagtacgtttacttccagggcaccggcgacatcaacgccccgcctggctcgcgcgaggct
cagcgcaggggaaataacgttgccaaggttaccccggagagttcttctcaggcatcggca
gagtcgcctaacgcggtttcctcgcgcggccctgcggaacgcgccccggagcgggtcgcc
aaatgccccccggccgccgaaaccgacggttcgggaaaagcgacggcggtggcggcggtg
gactcgcggctcaaacccgcggcggacaaggccccggctgctccgaccaacaacggcacg
ggccggtgcggcagtgcgaaggacgccacgttcagggacggcgccaaggaaccggtgacg
gccgtatcgacggtgacggacgacggcaccgcggcagcttcgttgaaggaggaggaatcg
agagcgggcgcggacgtggcggacgtgggagccgagcccaagcagaacaacgagaaacgg
ggcgacgcgggcagcggcgcgcaggccgacctggactttgatttgtcgagcgacagcgac
tctccatcgtcgccctccgccgcgctgaaggaagagggcgaggcggtggctcccccgacg
tccggcggaggcgacgacgatgtgaggacattgaaggccgacgtgaaggcggatgtgaag
gcggacgcgaaggcggacgctgtgcgcttggacgcggagatggcggcaccgctgtgcggc
ggcgtccggagcgggcgtgacgccaccaaggaggaggaggcggggggcagggaggagcgc
ctgggcgaagccgcggggccttgtgttctggcgtgcgagcccgaggtggtgggtgagaac
ggtggcggcggtggcggcggtggtgccggtggcggcgtcgagacgcgacacgacaccgtg
gacatcgcgtcgcagaacacggagcagtcgggcatcaccgagggggagtcctttgagcct
gaattcgacgttgaggaggaggaggggaaggcccacgagggcgcggcggtggtggtggtg
gacgccgccgccgctgaggtggacgataaggaggaggacgactacctgctgcacctggag
gaggtgctgtcgcgcgtgcacgcgatgttctacgtgcagcaggaccgctggcagcagcag
cagcaggggggggggcggcagggagagagcgaaccggcgggggcggtggtcgagccggat
ttgcgctccgtcgtgccggagctacgccgctccgtgctgcgtggggtcgtcgtcgtcttc
agtggagtgtttccgacgaactgcccggcggaccgcacgcgcgaataccgggtggcctct
gcgctgggagccatcgtcagttccagcctggtgctggatgccagcggcgctcagtgcgcc
accacgcatctcgtcgctgctaaggccggcacggacaaggtgcggcgagcgctcgagtcg
cggcgcgtccgtgtggtgacgcccgattggctgtgggcctgcgccgatcgctgggaccac
gtcgaggagtgcctcttcacactcaccgaggggtacacgcgcacgcacaggagcagcagc
ccagcgacgtacacggaggcgggcgccagtgacggcacccgccacgctctgctgcatccc
acccccatgcacccgcggggcagcacggcgccggcgccacccgaggcgcgcgtgtacgac
cccgtcacggggcgcctgctgaggaagggcagcgtccagtcgtgcgcgccaggagccagc
agctggcaagggcagcagcagcagcagcagcggaaggagcggcaggagcggcaggaacgg
caactgctgcagcagaagcagcaacagcaacagctgcaggtgcccagtataacgccggcg
cctgccgggggcctggggcatgacgaccattcgcctttcaggtgcctgagccagcagcaa
gtgagggatgctcctgaggggagtcggaggcagaggcagcccagcatgtcggaggccctg
ccgctctacaccctgtccaaggacgacctggacagcatggacaaggaagtggatgacatc
cttggggaggagagcgacggggaggaggagcaggaggaagaggtggaggaggaagaagag
gaggagacggcggagaaggcggaggttgctggagggagctctgcccgcagcggtgccccc
tctgtgtccgagatggaggtggagcggggggccggaggcagggcccccccgcaaagcaag
gaggagctggggacgctcatcgaaaggcccccttcgtcatcgagcggcggcagccttgaa
ggcagcgtcccgcgaggacacaagcgcaggagagacgagagcgaggaggaggaggaagaa
gaggagccagagggaagcagctcggaggcagacgagatggcagctgcgctcgatgctgag
cttgataacttcatgtga
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