Lethenteron reissneri (Far Eastern brook lamprey): 133355904
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Entry
133355904 CDS
T09663
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133355904 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133355904 (NUP88)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133355904 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
GMP_synt_C
Motif
Other DBs
NCBI-GeneID:
133355904
NCBI-ProteinID:
XP_061429305
LinkDB
All DBs
Position
52:complement(4814680..4835989)
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AA seq
746 aa
AA seq
DB search
MSLLSSQGLRDLFSRLAEVAASVSPEPEKAAASSAGAAGTPPGRPQGGTAAAAAASRELL
FSLGDHVYAWDERAAALLRAESGRRRGDEGGLETLLCLDPPSFRVQRVLPSPSATSLVAL
AGSRGLVVMHLPPYPQAGTKDSCTNCRVTIVAERLFTSRPSLRLLDLSWFPEEGGTEPHV
VLLTSDNMMRIYAVADPHTAVKVFSLTPDLEDSPSLPQSRSSFACALGERAVAFDFGLAR
PKQNEVPLVPGVPTMSSARTSRIAPPEETVFPIYVLYETGETYVVHTCLSGKSRTGDRVL
GPLPMHPAAEDNYGYGACSLLCLRNSPSVLVIATETGTVYHCLLLEEAQTEDGLPYTLFV
FDAVELELSLNLPSSSELEEQTLADFTCPIRLSRDPLCDMRYHCTHEAGVHSIAITWLPS
IQTFVGSPGEEKSEDELTTLADDHPSVVEHVLCTRPSANMHGPAVQGVCIVRDLSMGAVI
LCLTSNYEVVTRPLLMFTWQPSALLIDQASMSQNGDEAGGSSMRVASHSFREESLEHRIH
SILQRDTRNPILRCGSQAQLSQCECLQLVTRAVQVFREENILKLDLARDAILRRVRGMRQ
QKEKQMEDLKQISHQAQELRKSAECLVEKSEDARERQEALVERVHRVLRGAHACLPVLSD
RERHARSEIQTITDQVEELQRSIEQMLNKRNYQQKKVIVRPNLEVQAQNVMTPKQISCVQ
RLLEKENRLIVDLVKKINQIKVQINV
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgctctcctcacaggggttgcgggacctgttctcgcggctcgctgaggtcgcc
gcctccgtctctcccgagccggagaaggccgccgcctcctccgcgggagccgccgggacc
cccccagggagaccccaaggggggacggcggcggcggcggcggcgagccgggagttgctg
ttctccttgggggaccacgtgtacgcgtgggacgagcgcgcagccgcgctgctccgcgcc
gagagcggacggcgccgcggggacgagggtggacttgagacgctgctgtgcttggacccg
ccgtcgttccgcgtgcagcgagtgctgccctcgccttctgccacgtcgcttgtcgccctg
gcgggttcgcgtggcctcgtcgtcatgcacctgcctccgtaccctcaagccggaacgaaa
gactcgtgcacaaactgcagggttacgatagtggcggagcgcctgttcaccagccgcccg
tcgctgcgcctgctcgatttaagctggttccctgaggagggtgggactgagccacacgtg
gtgctgctcacttcagacaacatgatgcggatatatgccgttgctgacccccataccgca
gtgaaggtgttttcgctcacaccggacctcgaggactccccgagcttgccacaatcacgg
tcttcctttgcgtgcgctctgggcgagcgagccgtggcgtttgactttggcctagcccga
cccaagcaaaacgaagtgcctcttgtgcctggcgtgcccaccatgagcagcgcgcgcaca
tccagaatcgctcctccggaagagaccgtgtttcccatttacgtcttgtacgaaaccgga
gagacgtacgtcgttcacacgtgcttgagtggcaagtcccggacaggcgatcgagttttg
gggcccctgccgatgcaccccgcggcagaagacaactacggatacggagcgtgctccctc
ttgtgtttacgcaactccccttccgtgctcgtcatcgccaccgagacggggaccgtgtac
cactgcctgctgctcgaagaggctcagacggaggacggcctcccgtacacgctgttcgtg
tttgacgccgtggagctggagctgtccctgaatctgccttcgagcagcgagttggaggag
cagacgttggcagacttcacgtgccccatcaggcttagtcgagacccgctgtgtgacatg
cggtaccactgcacgcatgaagccggtgtgcacagcatagcgatcacatggctgccttcc
atccagacgttcgtcggcagtccgggcgaggagaaatccgaggatgagctcacgacgctg
gcggacgatcacccctctgtagttgagcatgtgctgtgcacccggccatcggcaaacatg
catggccctgcagttcaaggagtgtgcattgtacgtgacttatctatgggagcagtcatc
ctttgccttacttccaattacgaagtcgtcacaagaccgctgcttatgttcacctggcag
ccctctgcactgctcattgatcaagcgtccatgagtcagaatggtgacgaggcagggggc
tcgagcatgagggtggcgtcgcattcgtttcgggaggaatcgctggagcaccgcatccat
agcattctacagcgagacacgagaaatcccatactgaggtgtggctcccaggcacagctg
tcgcagtgcgagtgtctacagctcgtcacgcgtgcagtgcaggtgtttcgggaagagaac
attctgaaactggacttggcgcgggatgcaatcttacgcagagtacggggaatgaggcag
cagaaagaaaaacagatggaagatctgaaacagatttctcaccaagcgcaagagctacgg
aaatcggctgaatgtctcgtggaaaagtctgaggatgcacgagagagacaagaggctctg
gtggagagagtgcatcgcgtcctgcggggagcgcacgcgtgtctgcccgtcctctcggac
agagagcgacacgctcgcagcgagatccaaacaatcaccgatcaggtggaggagctccag
cgatctatcgaacagatgctgaataagcgcaactatcagcagaagaaggtcatcgtccgt
ccgaatctggaggtgcaggcgcaaaacgtgatgactcccaagcagatcagctgtgtgcag
cgcctccttgaaaaagagaacaggttaatcgtagatcttgtgaagaaaatcaaccaaata
aaagtgcagataaacgtgtga
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