Lethenteron reissneri (Far Eastern brook lamprey): 133355907
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Entry
133355907 CDS
T09663
Symbol
BOP1
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BOP1
KO
K14824
ribosome biogenesis protein ERB1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrj03009
]
133355907 (BOP1)
Ribosome biogenesis [BR:
lrj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133355907 (BOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BOP1NT
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
133355907
NCBI-ProteinID:
XP_061429307
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All DBs
Position
52:954357..1010769
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AA seq
769 aa
AA seq
DB search
MAASSSSCSAAAARASGGDSSNSSSKRRAEDEEPDAAQAPVAVEDDRREDESEEGDEDAS
DSEESVYSGLEDSGSSDTEDSDRDDDGDESDDGDGDVTAEGKSSAHEGTHSDPADEQQGD
GSSSAALPSATPVEAANQKPAVDEYEHDTSDEEDIRNTVGNIPLEWYEDYPHIGYDLDGK
KIIKPIRSKDELDEFLDKMDNPDYWRTVRDKMTGTDVILTDEQVQLIHRLQRGQLADVNY
DPYEPAVDFFTHEKMIHPVTNRPADKRSFIPSLIEKEKVSKLVHAIKMGWIKPRRPRERG
PVFFDLWATEDPNAVLGRHSMHVPAPKMRLPGHAESYNPPPEYLLTEEEKLAWEQQEPEE
RKLPFLPASYPNLRTVPAYPRFIQERFERCLDLYLCPRQRRLRVNVDPDELIPKLPKPKD
LQPFPTVQSLIYKGHTNLVRCISTDPTGQWLVSGSDDCSVRFWEVCTGRCVKVMEVEGAV
KSIAWNPNPSLCLVAFTVNNVVKIVNPMLGDKLVYGATDLLLSGFESPEEARKQPTVWVA
ATAEEHERGVRLLIQHPKSVRQLSWHGRGDYLVSVVPDNGSQQVMLHQVTRRRSQSPFRR
SKGLVQAAVFHPLRPFLLVATQRYVRVYNLASQTLAKKLMTNCKWVSSVAVHPGGDNVIC
GSYDRRLAWFDLDLSTKPYKVLRHHKKAVRAVCFHKRYPLFASASDDGGVIVCHGMVYND
LLQNPLIVPVKVLKGHQVMRDLGVLDVVFHPSQPWVFSAGSDATIRLWS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcctcctcctcctgctcggcggcggcggcgcgggcgagtggcggcgacagc
agcaacagcagcagcaagcggcgcgcggaggacgaggagccggacgccgcgcaggcccct
gttgcagtggaagacgatcggcgggaggacgagagtgaagaaggcgatgaagatgcgagt
gacagcgaagagagcgtctactcgggcctggaggactctggctccagtgacacggaggac
agcgatagagatgatgacggtgatgagagtgatgatggagatggtgacgtgacagctgag
gggaagtcctcagcgcatgagggaactcactccgatccagctgatgagcagcaaggagat
ggttctagtagtgcagcattgccttctgcgactccggtcgaagcagccaatcagaagccg
gcggtggatgaatatgaacacgacacatctgatgaggaggacatacggaacactgtggga
aacatccccctggagtggtacgaagattaccctcacattggctacgacctggacggcaag
aagatcatcaaacccatccgctcgaaggacgagctggacgagttcctcgacaagatggac
aatcctgattactggcgaacagtccgtgacaagatgaccgggacggacgtgatcttgacg
gacgagcaagtgcagctgatccatcgtctgcagcgaggccagctggccgatgtgaactac
gacccttatgagcccgccgtggacttcttcacgcacgagaaaatgatccacccggtgacg
aaccggcccgcagacaagcgcagcttcatcccttcgctcatcgagaaggagaaggtgtcc
aagctggtgcacgctatcaagatgggctggatcaaaccccggcggccgcgggaacggggc
ccggtcttctttgacctttgggccaccgaggacccgaacgccgtgctgggccgccactcc
atgcacgtcccggctccaaagatgcgcctgcccggccacgccgagtcctacaaccccccg
ccggagtacctgctcaccgaggaggagaaactggcctgggagcagcaggagcccgaggag
cggaagctgcccttcctgccggcaagctacccgaacctgcgcacggtgcccgcctaccct
cgcttcatccaggagcgcttcgagcgctgtctcgacctctacctgtgcccgcggcagcgg
cgcctgcgggtgaacgttgacccagatgagttgatcccgaagttgcccaagcccaaggac
cttcagcccttcccgactgtgcagtcccttatttacaaaggtcatacgaacttggtgcgg
tgcatcagtaccgaccccactggtcaatggttggtatcgggctcggacgactgcagtgtc
cgcttctgggaggtgtgcacaggccgttgtgtcaaggtgatggaggtggaaggagccgtg
aagagcatcgcgtggaacccgaacccttctctctgcctcgtcgccttcactgtcaacaat
gtggtgaagatcgtgaaccccatgctgggtgacaaactcgtgtacggagccacagacctg
ctactgtctgggttcgagtcccccgaggaggcacgcaagcagcccaccgtgtgggtggcg
gccacggcagaggagcacgagcgcggcgtgcgcctcctcatccagcaccccaagtcggtc
cgtcagctgtcgtggcacggccgtggtgactacctggtgtccgtcgttccggacaacggc
tcgcagcaagtgatgttgcaccaggtgacgcggcgccgctcgcaaagcccgtttcgccgc
agcaagggcctggtgcaggcggcggtgttccacccgctgcggcccttcctgttggtggcc
acgcagcgctacgtgcgcgtttacaacctggcgtcacagactctcgccaagaagctcatg
accaactgcaagtgggtgtcgagcgtggccgtgcacccgggaggcgataacgtgatctgc
ggcagctacgatcgccgactggcctggtttgacctggatctctctaccaagccatacaaa
gttctgagacaccacaagaaggccgtgcgagccgtttgctttcacaagcggtacccattg
tttgcttcggcctcggacgacggcggagtcatcgtctgccacggcatggtttacaatgac
ttgctgcagaacccgctgattgtgccagtgaaggttctcaaggggcaccaggtaatgcga
gaccttggcgttctggatgtcgtctttcatcccagccagccgtgggtcttctcagccggc
tcggatgccacgatccgtctctggtcctag
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