Lethenteron reissneri (Far Eastern brook lamprey): 133355940
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Entry
133355940 CDS
T09663
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133355940
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133355940
Spliceosome [BR:
lrj03041
]
Complex C
Other components
Complex C specific factors
133355940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
AAA_7
ResIII
nSTAND3
Cas3-like_C_2
AAA_16
AAA_30
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
133355940
NCBI-ProteinID:
XP_061429361
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All DBs
Position
52:complement(663835..685956)
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AA seq
702 aa
AA seq
DB search
MAATRVVPKFWKPGTEAPGVGEERATAGEEASTAFVYNPHTSLSIQQQRQRLPIFMHRNH
ILYLVEKYRTVVIVGETGCGKSTQIPQYLAEAGWTAEGHVVAITQPRRVAATTVAARVAE
ERGALLGHEVGYCIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKKYSVIILDEAHERT
LYTDIALGLLRKIQKKREELRIIVASATLDAEKFQKFFNHNDTSDPNKDTSAILTVEGRT
YPVEIFYTHSPVPDYVKTTVETIMKIHNDAADGDILAFLTGQEEVENVVSAVVEEVRAAA
ARTKGSLHKHVRALPMYAGLPYVDQMKVFERVGRSCRKVVVATNVAETSVTVPGIAFVVD
CGFVKLRAYDPRRAVDALLVTPASRASAQQRAGRAGRSRPGKCYRLYPESEFAKLPEATE
PEMRRSDMAPVILQLKALGIDNVLRFSFLSPPPAESMVQAVELLYALGGLDEQCQLTEPL
GVRMAEFPMGPMYAKMLLESGTFGCSKEIITIAAMMQIQNVFLSPPNQKIKAARQQRKFA
VEEGDHMTMLNVFEAFVKHNKSSAWCQQHFLNYKGLVRAGILQEQLRKLLRRFHIPSNSS
NGDADPVRRCIVSGFFANAAKLHHSGAYRTVRDDFELHIHPTSMLYAEKPPQWVVFNEVV
QTSRFFMRDVTAVEPAWLTELAPHFFQQSTDFSQASKRSRPS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacacgagtggttcccaaattctggaagccagggacggaggcgcctggagtt
ggggaggagcgagctactgcgggggaagaggcctccacggcatttgtgtacaaccctcac
acctccctttccatccagcagcagcgacagcgtttgcccatattcatgcacaggaatcat
atcctttacctggtggagaaataccgcactgttgtgattgtgggtgagactggatgcggt
aaaagcacacaaattccccagtacctggcagaagccggctggacagcggagggacacgtc
gtggccatcacgcaaccacggagggtcgcagcgaccacggtcgcagcgcgagttgccgag
gagagaggcgcgttgctgggtcacgaggtcggctactgcattcgctttgacgactgcagt
gaccctcaagccactcgcataaagtttttgacggacggcatgctggtgagggaaatgatg
gctgatccactgctgaagaagtacagcgttattatactggatgaagcccatgaacggact
ctgtacaccgatatcgctcttggcctgctaagaaagatacagaagaagagagaagagctg
aggatcattgtcgcatctgctactcttgatgcagagaaattccagaagttcttcaaccac
aatgacacatcggaccccaacaaggacacaagcgccatcctaaccgtggagggacgcacc
taccccgtggagattttctacacgcacagtcctgtgccagactatgtgaagaccacggta
gagacaatcatgaaaattcacaacgatgcagcggacggagacatcctggccttcctgacc
ggacaggaggaggtggagaacgtcgtgtcggccgtggtggaggaggtgcgtgcggcggcg
gctcgcaccaagggcagcctgcacaagcacgtgcgcgccctgcccatgtacgccgggctg
ccttacgttgaccagatgaaggtgtttgagcgtgtcggccgcagctgtcgcaaggtggtg
gtggcaaccaatgtggcggagacctcggtgacggtgccgggcatcgcgttcgtggtggac
tgtggctttgtgaagctgcgcgcctacgaccctcgccgtgccgtcgacgcgctgctcgtg
acgccggcatcgcgggcgtcggcacagcagcgtgccggccgggccgggcggagccgcccg
gggaagtgttaccgtctctatccagagtcggagttcgcgaagctgcccgaggcgacggag
cccgagatgcggcggagcgacatggcgcccgtcattctgcagctcaaggcgctcggcatc
gacaacgtcctgcgtttctccttcctctcgccgcctccagctgagtccatggtgcaagcc
gtggagctactctacgctttgggaggccttgatgagcagtgtcagctgacggagcctcta
ggagtgcgcatggctgagttcccgatgggacccatgtatgccaagatgctgctggaatca
ggaacctttggttgctcaaaagagattatcaccatcgccgccatgatgcagattcagaac
gtgttcctttctccgcccaaccagaagataaaggccgctcgtcagcagcgtaagtttgcc
gtggaagagggcgatcacatgacgatgctgaacgtgtttgaggcattcgtgaagcacaac
aagagttctgcctggtgccagcaacacttcctcaactacaaggggctagtgcgggctgga
atcctgcaggagcagcttcggaagcttcttcgaaggttccacatccccagcaactccagc
aacggagacgcagaccctgtgcggagatgcattgtgtccgggttcttcgccaatgccgcc
aaactacaccacagtggagcctacaggacggtacgcgacgactttgagctccacatccac
ccgacctccatgctctatgccgagaagccaccgcagtgggtggtgtttaacgaggtggtg
cagacatctcgcttcttcatgagggacgtgacggcggtggagccggcctggctcacggaa
cttgctccgcacttcttccagcagagcacggatttttctcaagcatccaagcggtcgcga
ccatcgtag
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