Lethenteron reissneri (Far Eastern brook lamprey): 133355998
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Entry
133355998 CDS
T09663
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133355998 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133355998 (JARID2)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
133355998 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
133355998 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
TFIIA
DDDD
DUF3464
Zip
eIF-3_zeta
SpoIIP
PAT1
Motif
Other DBs
NCBI-GeneID:
133355998
NCBI-ProteinID:
XP_061429455
LinkDB
All DBs
Position
52:11418574..11504359
Genome browser
AA seq
1602 aa
AA seq
DB search
MSKERPKRHISKKRLVSEREYNHGILWWEERYIQKALYRSLRDERGAKKGSAPPLPTRAP
HAANTAMGRGKGPQLKAGSLSRLTRSGLPAVLPCKRKRDKGREGSPAPTAGAGAASEEGN
LRKKLRAQRKFAQSQPGSPGGTPVKAPEPPPSAPASHMMDVCPKRPKTEDFLTFLCLRGT
RALPRSMELFGRASDEWDEEEETAAEEASSSSSSTSSAASSSSVAAAAVDGEGGGATTMA
MEESALPASPTSSCPSTPRRNRPGTHPPASNGHVWSTPTRPCRPPQQAQQQRQQQPQAQQ
QQQQQQQQQQAQQQQQQQQQQAQRRLRRAVAVRAGTVRPFPECLGGTAIVPVVVVVGRPA
PPSLAQRRPVTTTTATALAPKDSKLPNDSPCANSAGKVRAAAAAAARAVADARMQPRSSR
CAVTIRNGHVYCAKGRRHSLRSASNGGSSAGDDGGGDGGDGAALRSGSSPRPPPRQGHAD
APVTRQQNGSRSSCRPTLQVNGLLAHGASRAEKLGGADSATPKLGATGSDAAGKSGGRII
SRTQPAPPAPSPSLAGKRSGETSYATKINGCLRKGAAVRLLGRSGDDGERRPARGAQAAG
TAVARRHSRPTAGEAKLTRSVSEQLHRKAMAAERAAEAERARNDGGDRGASAGPALRSSS
VRRAANGDHDEKPAAAAATTTTVTVTLVKTPVERPRARSERDGAEAATHGANGNAAEIVR
PRLGTTTTACLARSEKPKNNNGNDNNKRAKPTTAEPPGATAGGAGCAETAAEDEPGAGET
GGARPAAPAPPQPSAPACGRTRASADSPGSRSARSAVPPAAPPSDLSEIPTLRPSSREFQ
DPVAYVESVRGHAEAFGACRVVPPADWRPECKLHEDMRFVTRVQHVHKLGRRWGPNAQRL
ACIRKHLLAQGIALHEPPVIGGCELDLARFSQLMGGMGGVHRVVGTRPWSRLADQLRVPR
GAQDRLAKLQEAYCKYLLAYDCLAPADRQQLLRDVLAEKRRLEQEQQEEEGAAAAANQQQ
PAPGPWRRGRSAGKPIAELRNGHINGAALRRGATAAAAAGARSRGHQAGHGGGDGDTGLN
TSSPSVSVNGTASTTASSTASSTSSSTTSSTRRRSVDTGRGEETMPGGEAAFLHGLQDCV
LKGKSVTLTAFYRMARNTVAMCFSTEEPAACEVEQRFWQLVEERDAHVAVHCGKVDTKTS
GSGFPVSKSDSFSRHGWNLTVLPSNPASVLRHLGTVSGVTVPWLNIGMIYSTSSWAQDPH
LLPSIDFLHTGADKIWYSIPAGQQEALERAVLSLSPANGKPALELLQQNIVSPEALRRAG
VRVHRAVQRSGEFLVVFPGACTANVSCGYSVSEAVPFATTGWLPTAWRAAQTLRERRSPN
LFAVEKLLYLAAVAELERENAAALRHVAPLLQTLRDVELRRRRRLFEAGLRLSARHGAAP
EGPHAPGSPMVVRKRVRRSPGEPESPERRCQTCRQLCYLSMVVQESDGTVFCLECVLAHV
KEKKTCRGLKMMYRYDEEQINSLVYRVTTAVASGAARHGDGTATTASPSRPKRSSRRTRH
GNATTTPPAPLTRTRDSPELATPAPSPPPPPLATSKRLQGLS
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaacggcccaagaggcacatcagcaagaaaagactggtgagtgagcgggag
tacaaccatggaatcctgtggtgggaggagcgctacatccagaaggcgctctaccgctcc
cttcgcgacgagaggggcgccaagaaggggagcgcccccccgctgcccacgcgcgccccc
cacgccgccaacaccgcgatgggccgtggaaaggggccgcagttgaaggccgggtccctc
tctagactgactcggagcggcctccccgcagtcctgccctgcaaacgcaagcgcgacaag
ggcagggagggcagccctgcccccaccgccggggcaggggcagcaagcgaggagggaaat
cttcgcaagaaactgcgggcccagcgcaagtttgcacagtctcagccgggcagcccgggc
ggcactcctgtgaaggcgcccgagccgcccccctccgcccccgccagccacatgatggat
gtgtgtcccaagcggcccaagacggaggacttcctcaccttcctctgccttcgaggcacc
cgtgccctgccccggagcatggagctgttcggcagggcctccgacgagtgggacgaagag
gaggagacggcggctgaagaggcgtcctcctcatcgtcctccacctcctcggcggcgtcg
tcgtcgtcggtggcggcggcggcagtggacggggaaggtggaggagcgacgacgatggcg
atggaggagtcggccctccccgcctcccccacctcatcgtgtccgtccacacctcgtcgc
aaccgccccggcacgcaccccccggccagcaacgggcacgtttggtcgacgccgaccagg
ccgtgccggccaccacagcaggcgcagcagcagcggcagcagcagccgcaggcgcagcag
cagcagcagcagcagcagcagcagcagcaggcgcagcagcagcagcagcagcagcagcag
caggcgcagcggaggctgaggagggcggtggcggtgcgcgctggcactgtaaggcccttc
ccggagtgccttggcggcaccgcgattgtgcccgtagtggtggtggtgggcagaccggca
cccccttcgctggcccagcgtcgcccggtcaccacgaccaccgccaccgcgctggcacca
aaggattctaaactcccgaacgattctccatgcgccaactcggccggcaaggtccgggct
gcggcggcagcggcggcgcgcgccgtggcggacgcccgcatgcagccacggtcttcgcgc
tgcgccgtcaccatccgcaacggccacgtttactgtgctaagggccggcgccactccctc
cgcagcgccagcaacggcggaagcagcgccggcgatgatggcggcggtgatggcggtgat
ggcgccgcactacggagcggctcttccccacggccgccccctcgccagggccacgctgac
gcaccagtcacgcgacagcagaacggcagccgcagttcgtgccgaccgacgctgcaagtc
aatgggctgctggcgcacggcgccagccgcgcagaaaagttgggcggcgcagacagtgca
acgccgaagctcggggcgaccggatccgacgcagccggaaagtccggcggccgcatcatc
tcgcgtacgcagccggcgccgccggcgccatcgccgtctctcgccgggaagcggagcggc
gagaccagctacgccacaaaaattaacggctgtctgagaaagggagcggccgtaaggttg
ctcggacggagcggggacgacggggagcgaaggccggcgaggggagcgcaggctgcaggg
acggcggtggcgcggcgccattcacgccccaccgcgggggaggcaaagctgacgcgctcg
gtgagcgagcagctgcacaggaaggcgatggcggcggagagggcggcggaagcagagagg
gcgagaaacgacggcggcgaccgcggggccagcgcgggaccagcgctgcggtcgagctct
gtccggcgggcggccaacggagaccacgacgagaagccggcggcggcggcagcgacgaca
acgacggtgaccgtgacgctggtgaagacgccggtggagaggccgagggcgcggagcgag
cgggacggggcggaggcagcgacgcacggtgcgaacggcaatgcagccgagatcgtccgg
ccacggctagggaccacgacgactgcctgtctcgctcggagcgagaagccaaaaaacaat
aatggcaacgacaacaacaagagggcgaagcccacgaccgcagaaccgcccggcgcaacg
gcaggcggcgccggctgcgcagaaacggcggccgaagacgagccgggcgccggggaaacc
ggcggagcgagaccggccgctcccgcgccgccgcaaccgtccgccccggcctgcggcagg
accagggcctcggccgattcgccgggcagcagatcggcgcggtcggcagtgccgccggct
gccccgccatcagacctctccgagatccccacgctgcgcccgagcagccgggagttccag
gaccccgtggcgtacgtggagagcgtgcgcgggcacgcggaggcattcggcgcgtgccgc
gtggtgcctcccgccgactggcgtcccgagtgcaagttgcacgaggacatgcgcttcgtg
acgcgcgtgcagcacgtgcacaagctgggccggcgctggggccccaacgctcagcgcctc
gcctgcatccgcaagcacctcctggcacagggcatcgcgctgcatgagccgcctgtcatc
ggtggctgtgagctggacctggcgcgcttctcccagctgatgggcgggatgggcggcgtg
caccgcgtggtgggcacgcgtccgtggagccgcctggcggaccagctgcgcgtaccgcgc
ggcgcccaggaccgcctcgccaagttgcaggaggcctactgcaagtacctgctggcgtac
gattgcctggcgcccgccgaccgacagcagctgctgcgcgacgtgctggcggagaagcgg
cgcctggagcaggagcagcaggaggaggagggcgcagcagccgccgcgaaccagcagcag
ccggcgcccgggccgtggaggagaggtcgttcggccgggaaaccgatcgctgaactgcgc
aatggccacatcaacggcgcggcgctacgccgcggcgctaccgcagcggcagcagccggc
gctcgctcgcggggacaccaggctggccacggcggcggtgacggcgacaccggcctcaac
acctcctccccttctgtcagcgtcaacggcaccgccagcaccaccgccagcagcaccgcc
agcagcaccagcagcagcaccaccagcagcacacggaggcgcagcgtggacaccggcaga
ggcgaggagacgatgccaggcggggaggcggcattcctgcacggcctgcaagactgtgtg
ctcaaggggaagtcggtgactctgacggcgttctaccgcatggcgcgcaacaccgtcgcc
atgtgcttcagcactgaggagcctgctgcctgcgaggtcgagcaacggttctggcagctc
gtggaggaacgcgatgcgcacgtcgcagtgcactgtgggaaggtcgacacaaagacttct
gggagtggatttccagtctccaaatcggattctttctccaggcacggctggaacttgact
gttctccccagcaacccggcctcggtgctgcgtcacctgggcaccgtgtctggagtgact
gtgccatggctgaacatcggcatgatctactccacctcgtcgtgggcccaggacccccac
ctcctcccctccatcgacttcctgcacacgggcgccgacaaaatatggtacagcatcccg
gcggggcagcaggaggcgctggagagagcggtgctctcgctgtcaccggccaacgggaag
ccggcgctcgagttgctgcagcagaacatcgtctccccagaggcgctgcgccgcgccggc
gtgcgcgtgcaccgcgccgtccagcgcagcggcgagttcctcgtggtcttccccggcgcc
tgcacggccaacgtctcctgcggctacagcgtctccgaggccgtgcccttcgccaccacc
gggtggctgcccacggcgtggcgcgccgcgcagacgctgagggagcggcgctcccccaac
ctgtttgcggtggaaaagctcctctacctggcagccgtagcggagctggagagggagaac
gcagcggcactcagacacgtcgccccgctcctgcagaccctccgggacgtggagctgcgg
cggcgacgccgtctctttgaagccggcctgcgactctcggcgcggcacggcgccgccccg
gagggtccccacgcgccgggcagccccatggtggtgcgtaagcgcgtgcggcgctccccc
ggcgagcccgagtcaccagagagacgctgccagacgtgccggcagctctgctacctctcc
atggtggtgcaggagagcgacggcaccgtgttctgtctggagtgcgtgctggcccacgtc
aaggaaaagaagacgtgccgtggtctgaagatgatgtaccgctacgacgaggagcagatc
aacagcctggtgtaccgggtgaccacggcggtggcgtcgggcgccgcacggcacggcgac
ggcaccgccaccaccgcgtcgccatcgcggcccaagagaagctcgcgccgcactcgccac
ggcaacgcaacgacgacgccgccggcgccgctgactcgtacgcgggactcccccgagctc
gcgacgccggcaccgtctccgccgccgccgccgcttgccacctcaaagcgcctccagggc
ctctcctga
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