Lethenteron reissneri (Far Eastern brook lamprey): 133356128
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Entry
133356128 CDS
T09663
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04144
Endocytosis
lrj04517
IgSF CAM signaling
lrj04520
Adherens junction
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133356128
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133356128
09144 Cellular community - eukaryotes
04520 Adherens junction
133356128
04530 Tight junction
133356128
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrj01009
]
133356128
Protein phosphatases and associated proteins [BR:
lrj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133356128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
133356128
NCBI-ProteinID:
XP_061429503
LinkDB
All DBs
Position
7:complement(4858276..4940124)
Genome browser
AA seq
1573 aa
AA seq
DB search
MKVTVRFGRTRVVLPCGDGSQRVRDAVTEAVRRYRKALGKDSSYWVQVQHLEHKDGGILD
DDDLLRDVCDDKDKLIAIYEEQEPQPGGGGDCTSTSSTGTQSPDMFGSEVEPPGHAAATA
AFNEIEVTPSALRATTPLHVRRSSDPALAGSASELVQPGLTVVGDGGRRPQTHWSTTNLH
QPAEPPPTQNSTGGGSEGGLGPMGEGHLPGFQRDLSRSSVGLTHPIVEKWLERQEAVENG
EKEEGGGHKRDEIVKPTSRAATPHPRDFKKLVEVVNDGGPLGIHVVPFLTKSGRSLGLRI
RTIEEGSRTQREGALRQHDCITRINGTRLTDTSFEESQKAFRDALKSSVLRLWVVHGEKR
EHYEQVMQLWGNQESEQIDSDSAEDIDEDYEDEGPPSFKVPPPVAPKPTTKPVAGLSGRK
QEPPSGAGVNAKVTPKSLLIAPARRMPIPAAFLAATDANSGTASSAQPIPAETQQHKPPA
QVPRKIPGPRSATGSTFGGDTTSAQLASPTKAPVKADLKLQQATAAVAAAVSAAVASRIP
MASSSMAAPVATPNVAYTTKKVDKKIPIHLKKGLDGLGFTIATRDTPVGGRTPIYVKSIM
PKGAALSDGRLKSGDRLLEVNGLDVTSRTQEEVVAILRSTKLGGSVDLLVSRHHDVPLSP
DDPPERPQVGSAAEEEDRLLSPDGSREFLTLHIPLHDMGAASLGVSVKGTKDRRTNADLG
IFIKTIIAGGAAAKDGRLRVDDQLIAVNRESLLGRSNLEAMESLRCAMSRDAGDPSLIQL
VVARSFGKPGPTEAESRAPGSAGNTAEVNERRVSATQSPVAAPDQGPVDKSAKPASTGAW
QGTTERDDSAGQERKAPQARSDPWEPGTSSTQGQLDPALAFQREGFGRQSVSEKRTVQYG
DPSHLEVLKARKSKSMDMIADEGSVHASAETRKGPSDGSVGPALGLKMSSSLESLQTAVA
AEGGRAEFLFHRPRPPRLIRGRGCNASFRAAIDKSYDMPQDGSDDDDDEDDEEEEDAMDT
VEEEEEDPEEAAKGLGDGVPGAPTGLPVPSGSAKTKRSSPRSKDATLESGAAGDKECKKD
KKAKKLKSLGMVFRFGKVKKEDRSEQKSGDKQKVVDNKAATEEEKEKMRDEQERIQTKHR
EIRERQARELKLQQEREQLAAQSRGTSGYYEEHNPAYASLGTSTSPPALHKPPYVKNNTK
AYASEDEIRAMYAKVNKAGSLPKPVPQSERMQAGGRVNSYYEECNPIYGRTRDGVPRHPQ
ASGGGPRYHRGEDGQDGDPARDIYARVAKTSSLPRPQPDSRATHGYQWVQREGGSTARDG
SDDKRAPSGAEHSRSQSGSEVRGGRSSVPLDAQRRSRFPDMRDLLPRPQRRVSSPTRQTK
RASRPAEDARAEKVTSPSRGDPGKASRTQPPPSALLNSEAPSSRSRHAKQQQQAEQPPRN
AERPAGGVPQPAGMGVLGFPRLAILSTGSLQRRAATSSQRDTGRPGRTGPTVGGRSVELQ
NSPAQLTRIPRFHSAGAGGGHHHYHQQHQQSPPATQATHAGQQQDLARFGFQPPKARHML
KPKDFQWGQTAAV
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacggtccgctttggccgcacgcgggtggtgctgccgtgcggggacggctcc
cagcgggtgcgggacgcggtgaccgaggcggtgaggcgctacaggaaggcgctgggcaag
gactcctcctactgggtgcaagtgcagcacctggagcacaaggatggtggaatccttgac
gatgacgatctcctccgggatgtgtgcgacgataaagacaagctgatcgccatctacgag
gagcaggagccccagccgggcggcggcggcgactgcacaagcaccagctccacgggcacg
cagagccctgacatgttcggcagcgaggtggagccgccgggccacgccgccgccaccgcg
gccttcaacgagatcgaggtcacaccctcggccctccgagccaccactccgctacacgtg
cgacgcagcagcgaccctgcgctggctggatccgcgtcggaactggtccagcccggcctt
acggtcgtaggtgacggtggccgcaggccccagacgcactggtccaccacgaacctgcac
cagccggccgagccacctcccacgcagaacagcacgggtggagggagtgaagggggattg
gggcccatgggggaggggcacctgccggggttccagcgggatctgtcgcgttcctcggtg
ggcctcacgcaccccatcgtggagaagtggctggagaggcaggaggccgtggagaatggg
gaaaaggaagagggcggtggccacaaacgggatgagatcgtcaaacccacgtcccgcgcg
gccaccccccatcccagggacttcaagaagctggtggaggtggtgaacgacgggggcccg
cttggcatccacgtggttccctttctcaccaagagcgggaggagcctgggcctgcggatt
cgcaccatcgaggaaggcagcaggacccagcgcgagggggcgctgcgccagcacgactgc
atcacgcgcatcaatggcacacgcctcaccgacacctcctttgaggagtcacaaaaggct
tttcgcgatgccctaaagagcagcgttctgcgactgtgggtcgttcacggggagaagcga
gaacactacgagcaggtgatgcagttgtggggcaaccaggagtccgagcagatcgattcc
gactcggccgaggacattgatgaagattatgaggacgagggcccaccgtccttcaaggtg
cccccgccagtggcgccaaaacccaccacgaaaccagtggcagggctaagcggcaggaag
caggaaccgccttcaggtgccggtgtcaatgccaaggtcacccccaagtctctcctcatt
gcacctgcgcggaggatgccgataccggcagctttcctggcggcgacagacgcaaattct
ggaacggcttcctctgctcagccaatcccagctgagacccagcagcataagccaccagca
caggtgcccaggaaaatcccaggccctagatccgcgactgggtcaacgttcggtggtgac
actacgtcggcacagctggcgtctcccacgaaagccccagtgaaggccgacctaaagcta
cagcaggcgacggcagcagtggcagcggctgtgtcggccgccgttgcgagtcgcatcccc
atggccagctccagcatggctgctcctgtggccacgcccaacgtcgcctataccacaaag
aaggtggataagaagattcctattcacttgaagaaaggtctcgacgggctaggcttcacg
atcgcgacacgcgacacgccggtgggaggccgcacgccgatctacgtgaagagcatcatg
cccaagggcgcggcactgagtgacggccgcctcaagtctggagatcggctcctggaggtg
aacgggctggacgtgacgagtcgcacgcaggaggaggtggtggcgattctgcgcagcacc
aaacttggcggctccgtcgacttgctggtctcgcgccaccacgacgtccccctctcccca
gatgatccgccggagcgcccacaagtaggcagcgcggcagaagaagaggatcgcttgctt
tcccctgacggttcccgcgagttcctgacactccacatccccctgcacgacatgggcgct
gcgagccttggggtcagcgtcaaggggaccaaggatcgccgaacaaacgcggatctgggc
attttcatcaagaccatcatcgcgggaggggcagctgccaaggatgggcgcctgcgtgtg
gacgatcagctgatcgccgtgaaccgcgagtcgctgctcggtcggtccaacctggaggcc
atggagtctctgaggtgcgccatgtcccgcgatgccggcgacccctcgctcatccagctc
gtggtggcgcgctcgttcggcaagccaggaccgacggaggcggagtcacgcgcgcctggg
tcagcggggaacacggcggaggttaacgagcgccgagtgtcggccacgcagagccccgtg
gcggctcctgaccaggggcccgtcgacaagtctgctaagccggcgagcacaggggcctgg
caaggcacaactgaacgggatgactcggctggccaggagaggaaggcaccgcaggcccgg
agcgacccctgggagccgggcaccagcagcacgcaggggcaactggacccagcgctggcc
tttcagcgggagggatttggccgacagagcgtatcagagaaacgcaccgtgcagtatgga
gaccccagccacctggaggtgctcaaggcacgcaagtccaagagcatggacatgatcgca
gacgaaggtagcgtgcatgcgtctgctgaaacacgcaaaggtccctcagacggctccgtt
gggcctgccttgggcctcaagatgagcagctcgctggagagtctgcagacagctgtggcc
gcggagggtggccgcgctgagttcctcttccaccggccgcgccccccccgtctcatccgc
ggccgtggctgcaacgcgagcttccgtgcggccatcgacaagtcgtatgacatgccccag
gatggcagcgacgatgacgatgatgaggatgacgaggaggaggaggatgcaatggacact
gtggaggaagaggaggaggacccggaggaggcagccaagggcctgggagatggcgtccct
ggggcccccaccggtcttcctgtcccaagcggtagcgccaagaccaagcgcagctctccc
aggagcaaagacgcaactctggagtctggcgcagctggcgacaaggagtgcaagaaagat
aagaaagccaagaagctaaagagccttggcatggtgttcaggtttggaaaagtgaagaaa
gaggacaggagtgagcagaagagtggggacaagcagaaggtggtggataacaaggcggcc
acagaggaggagaaggagaagatgagggacgagcaagagaggatccagacaaagcacagg
gagattcgcgagcggcaggctcgcgagctgaagctgcagcaggagcgcgagcagctcgcc
gctcagtcccgcgggacgtccggctactacgaggagcacaacccggcctacgccagcctg
ggcacctccacgtcaccgcctgctttgcacaaaccaccctacgtgaagaacaacaccaag
gcctacgccagcgaggacgagatccgagccatgtacgccaaagtgaacaaggcgggtagc
ctgccgaagcctgtcccccagtcagaaagaatgcaggcagggggtcgtgtgaactcctac
tacgaggaatgcaacccgatatacggccggacgcgggacggggtgcccaggcacccccag
gccagtggtgggggcccacgctaccaccgcggggaggacgggcaagacggcgaccccgcg
agagacatctatgccagggtggccaaaaccagcagcctgcccaggcctcagcccgacagc
agagccacacatggctaccagtgggtacagagagaagggggatcaacagctcgtgatggg
tctgatgacaaaagggcaccttctggtgcagagcactctcggtcgcaatctggctcagag
gtgcggggcggccgcagttcggtgccgctggatgcccagcgccggagccgcttcccagac
atgagagacctcctgcctcgtcctcagagacgtgtctcctcccccaccaggcaaaccaag
cgagcatcacgcccagcagaagatgcccgagcagagaaagtgacttcaccgtctcgagga
gacccaggcaaagcatcacgcacgcagccaccgccctctgcattgctcaactctgaagct
ccttccagccgctcccgacatgcgaagcagcagcagcaggcggagcagcctccgcgcaac
gcggagcgacccgcgggaggcgtcccgcagcccgcagggatgggcgtgttggggtttcct
cgactcgcaatcctctccacgggctctctacagcgccgtgccgccacctcttcgcagcgg
gacacagggcgccctggccggacgggacccacggtcgggggccgttcggtggaactccag
aattctcctgcgcaactcacgcgtattccccgcttccattcggcgggtgctggagggggg
caccaccactaccaccagcagcatcagcagtccccaccggccacgcaggccacccacgca
ggccagcagcaggacctggctaggtttggctttcagccccccaaggcccgtcacatgttg
aagcccaaggactttcaatggggccagacagcagcggtctag
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integrated database retrieval system
