Lethenteron reissneri (Far Eastern brook lamprey): 133356516
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Entry
133356516 CDS
T09663
Symbol
DCAF1
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrj01001
]
133356516 (DCAF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133356516 (DCAF1)
Enzymes [BR:
lrj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133356516 (DCAF1)
Protein kinases [BR:
lrj01001
]
Serine/threonine kinases: Other
Other
133356516 (DCAF1)
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133356516 (DCAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
LisH_PAC1
EIF3I
LisH
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
133356516
NCBI-ProteinID:
XP_061430043
LinkDB
All DBs
Position
54:11597324..11616901
Genome browser
AA seq
1586 aa
AA seq
DB search
MAAAAAAAAAAATAAATAAAATAAAAIASTVDSKAELGLLLEQWEREKGTGADPIPLLSQ
ISDLIERETEEYHKADPDPFDDRHPGRADPECMLGHLLKMLFKSDDFMNALVNAYMMTSR
EPPLNTAACRLLLNILPGLETSVVFQEKEGIVENLFKWARDAAEPLRSYAMGLLAAAMEI
QDIAANYRDDNCRMVPLALTRLRELCSSGGGVLASATEDAAGARGAAAPAPRRSSLAETT
AKRLASAGTGGPRAGELPFDENAVVEGALAAEEEEDCELLPRPPFVLAHRTPSAHAGHKQ
RTSFSPFETERSLNELSNSSWSETSPWVIGTSYRLLPLTASVQQRVIFQYLTPLGEYQEL
LAMFMQLGARELLMHYIDLRETNDTQLTYEALKYLASLLLHKKFAAEFVAEDGVQKLLEV
PRPSMAATGVSLCLYYLAYNQDAMERVCTLPDAVLSDLVSYALWLLECSHESGRCHATMF
FSISFSFRTVLDLFDSRDGLRRLINLVSTLEILNLEDQGALLSDDEIFASRQTARHTCLA
LRRYFQAHLALKGESVRRSLQRTDGGPVIPPQPPYKALVLSHQQVLELQEFLVACGPTRL
YWEAAEALHRLGGVPLLLQLVSFAAEWRTYYGRSETVRSALDVLAILTVVPKTQVVLAEP
IDVLNEIGPPIKTIGMNIVLKVAEGEVFLNEAEIQKSALQVVINCVCGPDRRPPSLGRFV
GGTPRRRTAQQQQQGSRSASTSATDNVLSKMWGVVRANNGIKVLLALLSVKAPITDADQI
RALACRALVGLSRSATVRQIISKLPLFCGGHMQMLMREPVLQDKRQEHVRFCRFASQLLE
RVSGKPMSAGGDVSLARLQRADVVAQTRITFPGKELLLLIRNHLQTHGLPESAAALTREA
DLPRGPLPPPPLPPPPTPTALTAPPQPASFSPAAMALPPGGGACLPRAPRLVNGLAGRAT
AGGTRAPAASSSSGLGPSQATAPPPPSSSQSGAAATAGGLLSSPGGGPSHGALPGTPSGA
GGALGRISFSKERLSPCAGSAQRKAARVLMQKADCGAYVQSPAFRKELDGRPAPSPPALD
GIITEYLREQHSRCKNPIVTCPPFSLFTPHQCPEPKQRQLAPFNFTSRLTRRAHFPMFGG
TEGASCDRQLIFSRFRPLSVFRESDEDGSCFTCCAFSARERFLMLGTYTGELKLYNLYTG
QEEASYACHSSPVTHCEPSRDGQLLLTSSDMSRPLSALWGMKDVFDLKHGFDNDHYVEFS
KLCQDRIIGTENDTARIYDVQTGVRTETLYNADLANHYKRNCATFSPTDELVLNDGVLWD
VRSAQAVHKFDKFNMNISGVFHPNGLEIIINTEIWDLRTFHLLHTVPALDHCSLVFNHAG
TVIYGAMLQPDDEDELMEEQMKSPFGSSFRTFNATDYKPIATIDVKKNIFDLCTDTKDCY
LAVIENQKGLDSLSMDSVCRLYEVGRQRLAEEEEEEEEQEDEEEDEDDSEDDALDLDEFD
SELDDEDEEGAEAGDGVDGDEEVGETRRENEDGEEMGLSEGDGADDEDDDEDGEDDEVEL
VMSDDSNDSDDDSSDLEDDMLLALNQ
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggcggctgcggcggctgcggcggcgactgcggcggcgactgcggcggcg
gcgactgcggcggcggcaattgcgtcgacggtggattccaaggctgagctggggctgctg
ctggagcagtgggagcgcgagaaggggacaggagccgatcccatccctctactctcacag
atctcggatctgatcgagcgggagactgaggagtaccacaaggccgaccccgaccccttc
gacgaccgccacccaggtcgggcagacccagagtgcatgctgggacacctactcaaaatg
ctcttcaaaagcgatgacttcatgaacgcgctggtgaacgcgtacatgatgacgagccgg
gagcctccgttgaacacggcggcttgccgcctgctgctcaacatcttgcctggcctggag
acctccgtggtcttccaggagaaggagggcatcgtggagaacctgttcaagtgggcgcgc
gacgcggccgagcccctgcgcagctacgccatgggcctcctcgccgccgccatggagatc
caggacatcgccgcaaactaccgcgacgacaactgccggatggttccactggcgctgacg
aggctcagggagctgtgcagcagcggcggcggcgtgctcgcgtcggcgacggaggacgcg
gcgggcgccaggggggcagcggcgccggcgccccgtcgctctagcttggcggagacgacc
gccaagcgcctcgcgagcgccggcaccggcgggcctcgcgccggcgagctgcccttcgac
gagaacgccgtggtggagggtgccctggcggcggaggaggaggaggactgcgagctgctg
ccgcggccgccgttcgtgctggcacacaggacgccgtcggcgcacgccgggcacaagcag
cgaaccagtttctcgccgttcgagacggagcgcagcctcaacgagctgtccaacagcagc
tggtccgagacgtcgccgtgggtcatcggcaccagctaccggctgctaccgctcactgcc
agcgtgcagcagagggtcattttccagtacctgacgccgctcggagagtaccaggagctg
ctggccatgttcatgcagctgggcgcgcgggagctgctcatgcactacatcgacctgcgc
gagaccaacgacacgcagctcacgtacgaggctctcaagtacctggcgtcgctgctgctg
cacaagaagtttgccgcggagtttgtggcggaggatggcgtccagaagctgttggaggtg
ccgcggccgtccatggcagccacgggcgtctcactctgcctctactacctggcctacaac
caggacgccatggagcgggtgtgcacgctgccggacgcggtgctctcggacctcgtgagc
tacgcgctgtggctgctcgagtgctcccacgagtcgggccgctgccacgccaccatgttc
ttctccatctccttctccttccgcaccgtcctcgacctctttgactcgcgcgacggcctc
cgccgcctcatcaacctcgttagcacgctggagatcctgaacctggaggaccagggagcg
ctcctgagtgacgacgagatcttcgcgagccgccagacggcgcggcacacctgcctggcg
ctgcgccgctacttccaggcgcacctggcgctcaagggcgagtcggtgcggcgctcgctg
cagcggacggacggcgggcccgtcatccccccccagccaccctacaaggcgctggtgctg
agccaccagcaagtgttggagctgcaggagtttctggtggcgtgcggacccacgcggctc
tactgggaggcagccgaggcgctgcaccgactgggcggggtgcccctcctgctgcagctc
gtctcgttcgccgccgagtggcgcacctactatggccggagcgagacggtgcgctctgcg
ctggacgtcctcgccatcctcaccgtggtccccaagacgcaggtcgtccttgctgagccc
atcgatgtcctcaacgagatcgggccacccatcaagaccatcggcatgaacatcgtgctg
aaggtggcggagggcgaggtgtttctaaacgaggccgagattcagaaatcggcgctgcag
gtcgtcatcaactgcgtgtgcggccccgaccggcgcccgccgagcctgggccgcttcgtg
ggcggcactccgcgccggcgcaccgctcagcagcagcagcagggctcccgctccgcctcc
acctccgccaccgacaacgtcctgagcaagatgtggggcgtggtgcgcgccaataacggc
atcaaggtgctgctggcgctgctgtcggtgaaggcgcccatcacggacgccgaccagatc
cgggcgctggcgtgccgcgcgctcgtgggcctttcgcgcagcgccaccgtgcggcagatc
atcagcaagctgccgctgttctgtggcggccacatgcagatgcttatgcgcgagcccgtg
ctgcaggacaagcggcaggagcacgtgcgcttctgccgcttcgcctcgcagctgctggag
cgcgtgtcgggcaagcccatgtcggcgggcggcgacgtgtcgctggcgcggctgcagagg
gccgacgtggtcgctcagacccgcatcaccttcccgggcaaggagcttctgctgctcatc
cgcaaccacctgcagacgcacggcctgccggaatcggccgccgcgctcacgcgagaggcg
gacctcccccgcgggccgctgccgccgccgccgctgccgccgccgccaacgccgacggcg
ctgacggcgccgccgcagccggcgtcgttctccccggcggcgatggctctgccgccgggg
ggcggggcctgcctgccgcgcgcgccgcgcctcgtcaacgggctggcgggccgcgccacg
gccggcgggacccgggcgccggcggcgtcgtcgtcttccggcctcggcccgtcgcaggcc
acggcgccgccgccgccctcgtcgtcgcagagcggcgccgcggcgacggcgggggggctg
ctgtcgtcgccggggggggggccctcgcacggggcgctgcccgggacgccctccggcgcc
ggcggcgccctgggccgcatcagcttcagcaaggagcggctgtctccctgcgccggctcg
gcccagcggaaggcggcgcgcgtgctgatgcagaaggcggactgcggcgcgtacgtgcag
tcgccggccttccgcaaggagctggacgggcggccggcgccgtcgcccccggcgctcgac
ggcatcatcacggagtacctgcgcgagcagcactcgcgctgcaagaacccgatcgtcacg
tgcccgcccttctcgctcttcacgccccaccagtgccccgagcccaagcagcggcagctg
gcgccgttcaacttcacgtcgcggctcacgcggcgagcccacttccccatgttcggcggc
accgagggggcgtcgtgcgatcggcagctcatctttagcaggttccggccgctctccgtg
ttccgcgagtcggatgaggacggcagctgcttcacgtgctgcgcgttctcggcgcgcgag
cgcttcctcatgctgggcacctacacgggggagctgaagctatacaacctgtacacgggc
caggaagaggctagctacgcctgccactcctcgcccgtcacgcactgcgagccgtcgcgg
gacgggcagctgctgctgacctcttccgacatgagccgccctctctccgcgctgtggggc
atgaaggacgtgttcgacttaaagcacggcttcgacaacgatcactacgtggagttcagt
aaactctgccaggaccgcatcatcggcaccgaaaacgacacggcgcggatctacgacgtg
cagacgggtgtgcgcacggagacgctgtacaacgccgacctggcgaaccactacaagcgg
aactgcgcgacgttcagcccgacggacgagctggtgctcaacgacggcgtgctgtgggac
gtgcgctcggcgcaagccgtgcacaagttcgacaagttcaacatgaacatcagcggtgtg
ttccaccccaacggcctggagatcatcatcaacaccgagatctgggacctgcgcacgttc
cacctcctgcacaccgtgcccgcactcgaccattgcagcctggtgttcaaccacgcaggc
accgtcatctacggcgccatgctccagccggacgatgaagatgaactgatggaggagcag
atgaagagccccttcggatcgtcctttcgcacgttcaacgccaccgactacaagcccatt
gccacgatcgacgtgaagaagaacatcttcgatctgtgcacggacaccaaggactgctac
ctcgccgtcatcgagaaccagaaagggctggacagcctgtccatggacagcgtgtgccgc
ctctacgaggtgggcaggcagaggctggccgaggaagaggaggaggaagaggagcaggag
gatgaggaggaggatgaggatgactccgaggacgacgcgctggatctggacgagttcgac
tctgagctcgacgacgaagacgaggagggggcggaggcgggcgatggggtggacggggac
gaggaggtgggggagacgcgcagggagaatgaggacggggaggagatgggactctccgaa
ggggatggggccgatgatgaagatgatgacgaggatggagaggatgacgaagtggagctc
gtgatgagcgacgacagcaacgactccgacgacgacagctctgacctggaggacgatatg
ctcctcgcgctgaaccagtga
DBGET
integrated database retrieval system
