Lethenteron reissneri (Far Eastern brook lamprey): 133356520
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Entry
133356520 CDS
T09663
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49-like
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrj01002
]
133356520
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133356520
Enzymes [BR:
lrj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133356520
Peptidases and inhibitors [BR:
lrj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133356520
Ubiquitin system [BR:
lrj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133356520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133356520
NCBI-ProteinID:
XP_061430049
LinkDB
All DBs
Position
54:complement(11555325..11564745)
Genome browser
AA seq
1044 aa
AA seq
DB search
MDRCRHVWRLKLSQNHSILNPDKWACVDCAGCCAVRKTNDGGACNGEGGGLPVDGGDEGG
AGGGGHTGGAVCNHACGGGGAVCEPHDVSGFASCGTATTAATFCDDGACDCASSVWACLT
CPHVACGRDVAAHADRHAAMTRHPLAMHVAELYVFCFACDDYVLNDNAQGDLKLLRGALG
TVRARRGGPPGGLLRGGGGGSSGGGGRALRSAGGSGEACTWNRAGEARARANDRLLTALK
LRRLRRLRRAFGAWFGETGSGRARLEEGRRQEEAERRREAQRARRAEHKRQLREEMSAQP
PRKSARLATRAHYAIGGGDGDGARPGGGGTSRAWRSRQLERAMAALKRQSSMLTPGVTGL
RNLGNTCYMNSILQVLSHLHKFRECFLALDMSEGDAPPAPPPPSPAHGGGETRGPFPLIP
SAPPSSAGPLGDLLDRAASAGRLARVSTRSVHKLLQARRAAGIVGRAPGQTAREPAGPAG
LGGGGSGSARSLRLLQSPVGCPGPLSLCRELHTLFRVMWSGKWALVSPFAMLHSVWRLIP
AFKGYGQQDAQEFLCELLDRVQRELEGAGGRGPPLLIPLAQRTLLRHVLQVVNTIFQGQL
LSQVTCMSCLHKSDTVEPFWDLSLEFPARYHCVRKRAGAHGRSHARARAHHPDADCSLTE
MLSKFTETEALEGKIYACSFCNSKQRGGASKPLVLTEARKQLLVCRLPQVLRLHLKRFRW
SGRNQREKIGVHVAFARELSMRAFCSRSGARLGGREGLVYDLSAVVMHHGRGFGSGHYTA
YVYNTEGGFWVHCNDSEMSVCSVEEVCRAQAYILFYSQRKSPDDRICATATAVPETRVLP
PASAPVAPTLAPPTSSPTPPASPKPSGPEAPFSLDRRAAESFALPARSPAADGERCEPQA
TPFTPPAPPPLDTQPRGGLRGDDEQDLAAGTPDARSSSLPDSDAGVRTLSLHPQVSERPS
PPLGHSVPGFGNLPDSVGERAEPALPAPTLASAEPHQTSAGFWLEAQACGGGGAVEPGPL
VATAGPAEGGCGVTSEFGAAAEHS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccgccacgtgtggagactcaagctttctcagaaccactcgatactcaac
ccagacaagtgggcgtgcgtggactgcgccggctgctgcgcagtacggaagaccaatgac
ggtggtgcgtgcaacggcgagggcggaggcctgcccgtggacggcggagatgaaggtggc
gccggcggcggtggtcataccggcggtgcggtttgtaaccacgcgtgcggtggcggcgga
gcggtttgcgagccgcacgacgtgtcaggttttgcctcttgcggtaccgccaccacggcc
gccaccttctgcgacgacggcgcctgcgattgcgcctcctcggtgtgggcctgcctgacg
tgcccccacgtggcgtgcgggcgtgacgtggccgctcacgccgaccggcacgccgcgatg
acgcggcacccgctcgccatgcacgtggcggagctctacgtgttctgcttcgcgtgcgac
gactacgtcctcaacgacaacgcgcagggcgaccttaagctgctgcggggggccctgggc
accgtgcgggcgagaagaggcggtcccccgggggggctgctgcgcggcggtggtggcgga
agttcaggcggtgggggccgtgccctgcgatcggcagggggtagtggggaggcgtgcacg
tggaatcgcgctggtgaggcgcgggcccgtgccaacgaccgcctgctcacagcactcaag
cttcgccgcctccggcgtttgcggcgcgcatttggcgcctggtttggcgaaacggggagc
ggacgtgcccggctcgaggaggggcgccggcaggaggaggcggaacgccggcgcgaggcc
cagcgtgcccgccgagctgagcacaagcgccagctgcgcgaggagatgtccgcccagccg
ccgcgtaagagcgcccgcctcgccacccgcgctcactacgccatcggcggcggggacggc
gacggcgccaggcccggcggcggcggcacgagccgcgcgtggcgcagccggcagctggag
cgtgccatggcagcgctaaagcggcagagctcgatgctgacccccggcgtcactgggctg
cgcaacctgggcaatacgtgctacatgaactccatcctgcaggtgctcagccacctgcac
aagttccgcgagtgcttcctggcgctcgacatgagcgagggcgacgctccgccagcgccg
ccgccgccgtccccggctcacggcggcggtgagacgcggggtcccttccccctcatcccg
tcggcgccgccgtcgtcggccgggccgctcggcgacctcctggaccgcgcggcgtcggcg
gggcggctggcgcgagtatcgacgcgcagcgtgcacaagctgctgcaggcgcggcgtgcg
gccggcatcgtggggcgcgcaccggggcagacggcgcgcgagccggcgggccccgcgggg
ctgggcggcggagggagcgggtcggcgcgcagtttgcgcttgctgcagagccccgtgggc
tgccccgggccgctgtcgctgtgccgcgagctgcacacgctcttccgcgtcatgtggtcg
gggaagtgggcactggtgtcgcccttcgccatgctgcactcggtgtggaggctcatcccc
gcgttcaagggctacgggcagcaggatgcgcaggagtttctctgtgagctgctcgaccgc
gtgcagagggagctggagggggcggggggccgtggccccccactcctaatacccttagcc
cagcgcacgctgctgaggcacgtgctgcaggtcgtcaacaccatcttccagggccagctg
ctcagccaggtcacctgcatgtcatgcctgcacaagtccgacacggtggagcccttctgg
gacctgtcgctggagttccccgcgcgctaccactgcgtgcgcaagcgcgccggggcgcac
gggcgctcgcatgcgcgcgctcgcgcccaccacccggacgccgactgctcgctcaccgag
atgctgagcaagttcaccgagactgaggcgctagagggcaaaatctacgcttgcagcttc
tgcaacagcaagcagcggggtggcgcctccaagcccttggttctaacagaagccaggaag
cagctgctggtgtgccgtctgccccaagttctgcggctgcacctcaagcgcttccggtgg
tccgggcgtaaccagcgcgagaagatcggcgtccacgtggcattcgcacgcgagctcagc
atgagggccttctgcagccgcagcggcgcgcggctgggcggacgcgagggcctggtgtac
gacctgtcggccgtcgtcatgcaccacgggcgtggcttcggctccgggcactacacggcc
tacgtctacaatactgagggtggcttctgggttcactgcaacgactcggagatgagcgtg
tgcagcgtggaggaggtgtgccgcgcccaggcctacatcctcttctactcgcagcgcaag
tcacccgacgatcgaatctgcgccacggcaacggcggtgccggaaacacgggtgttgccc
cccgcgtcggccccggtcgcccccaccctggccccccccacctcttcccctacgccccca
gcctccccaaaaccctccggccccgaggcgccgttttctttggatcgcagggcggccgag
tcgtttgcgctccccgcacgttcgccagccgccgacggggagcgctgcgaaccgcaggcg
acacccttcaccccgccggcaccgccgccgctggacacgcagccccggggaggcctgcgc
ggcgacgacgaacaggaccttgccgccggcacgcccgacgcccggagtagctcgctcccc
gacagcgacgccggcgtaaggacgctgtcgcttcacccgcaggtgtccgagcggccgtcg
ccaccactcggacactccgtcccgggttttggaaatctcccggattccgttggcgagcga
gccgagccggcgttgcccgcgcccacgctggcctccgccgagccgcaccagacatccgcg
ggtttctggctcgaagcgcaagcttgcggcggcggcggcgccgttgagcctggcccgctc
gtcgcgaccgccggaccggcggaaggaggttgcggcgtcaccagcgagtttggcgcggcc
gcggagcacagctga
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