Lethenteron reissneri (Far Eastern brook lamprey): 133356540
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Entry
133356540 CDS
T09663
Name
(RefSeq) opticin-like
KO
K08127
epiphycan
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lrj00535
]
133356540
Proteoglycans [BR:
lrj00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
133356540
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_NXF2
Motif
Other DBs
NCBI-GeneID:
133356540
NCBI-ProteinID:
XP_061430087
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Position
54:complement(11671127..11680372)
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AA seq
380 aa
AA seq
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MPPASRIASRIASRIASRPLRLSRISAPSLPTSGDSSRSTLRRLRSYRMRLLIVSALVLL
AVVPILAAPPKEKKARKKPRPTEPPPPPPPEPEYVVEAPQDPVPDLSNYDDLLNYDTELL
AEPKEEAGLLIPKTEAQPKAPVTEKPKTAPPPAAGGAGGAGGPGLFGQEAPIGLPTCLLC
VCLRGSVYCDDNDLDAIPSLPRDTSYFYARYNRIGTVRLADFQGLTRLKRIDLSNNEVAS
VETGALVGLVALEELNLGSNRLTAIPALPSSLRQLDLQHNQLVNSGLPVDVFRDMNLLTY
LYLGNNRLDHIPVPFPMSLRVLHLQYNNVQEIRDDTFCSTKQPIMRRVLEDIRLDGNPVN
LSRTPNAYVCLPRLPTGRTY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcctcccgcattgcctctcgcattgcctcccgcattgcctctcgtcccctc
cgtctctcccgcatctctgctccatctctgccgaccagcggcgactcctccagatcgact
ctccgtcgactgcgaagttacaggatgcgtctcctgatcgtgtcggcgctggtgctgctg
gccgtggtgccgatcctcgcggcgccccccaaggagaagaaggcccgcaagaagccgcgc
cccacggagccaccgccgccgccgccgccggagcccgaatacgttgtcgaggccccacag
gaccccgtgcccgacctcagcaactacgacgacctcctgaattacgacaccgaactgctg
gcggagcccaaggaggaggccgggttgctcatcccgaagacggaggcacagcccaaggca
cccgtgaccgagaagccaaagaccgcaccgccccccgccgcgggtggagcagggggagca
gggggaccagggctgtttggccaggaggcaccaataggcctccccacgtgcctgctctgt
gtgtgcctgcgtggctccgtctactgcgacgacaacgacctggacgccatcccgtcgctc
cctcgcgacacctcctacttctacgcgcgatacaaccgcattggcaccgtgcggctcgcc
gacttccagggcctgacccgtctcaagcgcatcgacctgtccaacaacgaggtggccagc
gtggagaccggcgcgctggtggggctggtggcgctggaggagctgaacctcggcagcaac
cgcctgacggcaatcccggcgctgccctcctccctgcgtcagctcgacctgcagcacaac
cagctggtcaacagcggcctccccgtcgacgtcttcagggatatgaatctgctcacctac
ctctaccttggcaacaaccgcctcgaccacattcccgtgccattccccatgagtctccgc
gtgctgcacttgcagtacaacaacgtgcaggagatccgagacgacacgttctgcagcacc
aagcaaccgattatgcgtcgcgtcctggaggacatccgcctggacggcaacccggtcaac
ctgagccgcacacccaacgcctacgtgtgcctgcctcggctgcccacgggccgcacgtac
tga
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