Lethenteron reissneri (Far Eastern brook lamprey): 133356566
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Entry
133356566 CDS
T09663
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator-like
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj02010
ABC transporters
lrj04145
Phagocytosis
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133356566
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
133356566
09144 Cellular community - eukaryotes
04530 Tight junction
133356566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133356566
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
133356566
Transporters [BR:
lrj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
133356566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
CFTR_R
SMC_N
AAA_29
AAA_21
AAA_23
DUF87
ATP-synt_ab
MMR_HSR1
MeaB
Motif
Other DBs
NCBI-GeneID:
133356566
NCBI-ProteinID:
XP_061430133
LinkDB
All DBs
Position
54:complement(4789324..4841649)
Genome browser
AA seq
1452 aa
AA seq
DB search
MSGRNLKMQASPFEKAGIFSRMFFRWPRHVLRKGYKHRIERSDIYRTPLQDQADTLSERL
EREWDREISQSENRPHLLTAIRRCFLWRFVGLGVIMLLAEFTKVVQPFFLGQIIASFNPS
TVDVQEPLLLALGLSACFVLRTLLLHPAVFGLQHLGMDVRIATFCLIYKKIMKLSSSVLD
KITVGQLVSLLSNNLNKFDESLTQAHFIWIAPIQCVGLLAFLWRELGPFCLVGFAILLIV
TLLQAWLGHKINSYRDKRGGKINERIALTSEVLENIEAIKVHGWEEAMGKLIDELRKQEL
KLTSRASYSRYFNSAAFFFSGVFVVFASILPYAVYNELTLRRVLTSVSFFNVLRMAITRS
LPWSLQMWVDATASIGKIQDFLLLKEYRPLDYNLSTTEVEIVSITASWDQIDGIVPEQGS
KVKNGIINVAATDLPFYKSYVLSDINFKLNKGEMLIVMGSFGSGKSSLLLLMLGELLPWD
GRVRHSGRLSFSSQQPWIINASVQENITLGLHLDKALLWQVLRACGLQEEIMNLPQKEKT
LIGESGFNLSGGQRARISLARAVYREADLYLLDSPFSYLDVSTEKQVFESCIDGFLAKKT
RILVTSKVEHLQRADKVLILNDGVVYFYGTFPELQKSKLEILSLIMQAERFDSCSSDRRG
SMITGVLRRGSAQSGDAAASPNAASVSEPPQGTQFPFQAQRFSVVSAAGTSVVVAIPTAG
PHEPEGRRLSLIPDTEDGKQLLPAAGAGPLHAIKRRKSVLHLMLGVSAGYENTRRAARIQ
QHAPHGDPFLLPSVVPQRLPARKSLTSVAEESDDVPEDDNIKDCFVDADGEEGELASWTT
YRRYFGSSTLFGIVLCLNLVLFAIQVMVYGVGLWNLRSQEDRVNTTRPDNGTGGVQSFTD
NYYYFYIYVGLADSFFVLDPIRGLLLIHSAIRVSDTLSRGMLRAILHAPASFFLEKQPGY
IINRFSKDVAITDDQLPLAIFDYFQLFLIVLGAVTVVSAMIPWTMLVTLPLGISCMILRH
YFLRTFRQLKQMESEAKNPIFAHIVATLKGLWTIRAFSRDDYFENIFHQALDIHTATWFL
YLSALRWFQMRIDIIFTLFITAVTFISVGVKGYSEGSIAIALTLAMNIMSTFQWAINTSI
EVEGMMRSTERILRFMDIPEESSGFVVTPPPPDWPNAGHLEVVNLSMRHSPTAPYVLQNI
SFNVQQGQKMGILGRTGAGKSTLLACLLLQRDVEGEVRIDGLSARNVAPYTWRSAFQVIT
QKIFIFTGTLRKNLDPYGRCNDEEIWKAIDLAGLRDVVEALPGGLDVMLVEGGWVLSEGQ
KQLLSLVRCLLYKARILLLDEPTANLDQITAQIMMRIIRKEFKDCTILVSEHRIRAIYDC
NQILVLEDGKMREYGTAQMVFKKSALFREFVPDAGSFRGHPVRSSMTLRHSIKHISLQEE
LAEDDVIQETRL
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccgcaacttgaagatgcaggcttcgccttttgagaaggccgggatattctca
cgcatgtttttcaggtggcccaggcacgtgctgagaaagggttacaagcatcggatcgag
cgctcggacatctaccggactcccctgcaggaccaggcggacacgctctccgagaggctc
gagagggaatgggacagagaaatctcgcagtcagaaaaccgccctcacctgctcaccgcg
attcgccggtgcttcctgtggcgcttcgtgggcctgggcgtcatcatgctcctcgcggag
ttcaccaaagtggtgcagcccttcttcctgggccagatcatcgcctccttcaacccgagc
accgtcgacgtgcaggagccgctgctgctggcgctggggctgagcgcgtgcttcgtcctg
agaacgctgctgctgcaccccgctgtgttcgggctccagcacctgggtatggacgtgcgg
attgccaccttctgcctcatttacaagaagatcatgaagctctcaagcagcgtcttggat
aagatcaccgtgggacagctggtcagcttgctgtcgaacaacctgaacaagttcgatgag
agcctgacccaggcccacttcatctggatcgcgcccattcagtgcgtgggcttgctggcc
ttcctctggcgagagctggggcccttctgcctcgtgggattcgccattctgctgatcgtg
acgctgctccaggcgtggctgggtcacaagatcaactcctacagagacaagcgcggaggg
aagatcaacgagcgcatcgccctcacgtcggaggtgctcgagaacatcgaggccatcaaa
gtgcacggctgggaagaggccatggggaagctcatcgacgagctgcgcaagcaggagttg
aagctgacgagcagagcctcctacagcagatacttcaacagcgcggcgttcttcttctcg
ggcgtgttcgtcgtgttcgcctccatcctgccgtacgccgtgtacaacgagctcacgctg
cgccgggtgctcacctccgtcagcttcttcaacgtcctgcgcatggccatcaccaggtcg
ctgccgtggtcgctacagatgtgggtcgatgcgaccgcctccattggaaagatccaggat
ttcctgttgctgaaggagtaccgtccgctcgactacaacctctccaccaccgaggtggag
atcgtgtccatcacggcgtcgtgggatcagatcgatggaatcgtccccgagcaaggaagc
aaggtgaagaatggaatcatcaacgtggccgccaccgacctgccgttctacaagtcgtac
gtcctgtcggacatcaacttcaagctcaacaagggagagatgctcatcgtcatgggctcc
ttcggctcgggcaagagctcgctgctgctgctcatgctgggggagctgctgccgtgggac
ggccgcgtgcgccacagcggccgcctctccttctcctcccagcagccgtggattatcaac
gcctccgtgcaggagaacatcaccctcggcctgcacttggacaaggccctcctctggcag
gtgctgcgcgcctgtggcctgcaagaggaaatcatgaatctgcctcagaaggagaagacg
ctgattggggagagtggcttcaacctcagcggcgggcagagagcgcgcatctcgcttgcc
agggccgtgtacagagaggcagatctctatttgctcgactctccattcagctacctcgat
gtgtcaacagaaaagcaagtcttcgagagctgcatcgacggcttcctggccaagaagacg
cgcatcctggtgacgtccaaagtcgagcacctgcagagggcggacaaggttctgattctg
aacgacggggtcgtttacttctacggcaccttccccgagctgcagaagagcaagctggag
atcctgtcgctcatcatgcaggcggagcgcttcgacagctgcagctccgaccgccgcggc
tccatgatcacgggcgtgctgcgccgtggctccgcgcagtccggtgacgcggcggcgtca
cccaacgccgccagcgtctcggagccgccccaggggacgcagttcccgttccaggcccag
cggttctccgtcgtctccgccgccgggacgtccgtcgtcgtcgcgatccccacggccggt
ccgcacgagcccgagggtcgccggctgtcgctcatcccggacacggaggatgggaagcag
ctgctgcccgccgccggcgcggggcccctgcacgccatcaagcgcaggaagtcggtgctg
cacctcatgttgggggtatcggccggctacgagaacacgcggcgcgcggcgcgcatccag
cagcacgccccgcacggcgaccccttcctgctgcccagcgtcgtgccccagaggctgccc
gcccgcaagtcgctcaccagcgtggcggaagagagcgacgacgttccggaagacgacaac
atcaaggactgctttgtggacgcggatggcgaggagggggagctggcgagctggaccacg
taccgccgctacttcggcagcagcaccctctttggcatcgtgctgtgcctcaacctggtg
ctcttcgcgatccaggtcatggtgtacggagtgggactatggaacctgcggagtcaagaa
gaccgcgtgaacacgacgcggcccgacaacggcacgggtggcgtccaaagcttcaccgac
aactactactacttctacatctacgtggggctggccgacagcttcttcgtgctggacccc
atccgggggctgctgctcatccactcggcgatccgcgtgtcggacactctgagccgcgga
atgctgcgcgccatcctgcacgcgcccgcctccttcttcctggaaaagcagccaggctac
atcatcaaccgcttctcaaaagacgtggccatcaccgatgatcagctcccactggcaata
ttcgattacttccagctgttcctcatcgtgctgggtgcggtgaccgtggtgagcgccatg
atcccgtggacgatgctcgtcacgctgcctctcggcatcagctgcatgatcctgcgccac
tacttcctgaggacgttccgccagctcaagcagatggagtcggaagccaaaaacccaatc
tttgctcacattgtcgccactctgaaagggctgtggacgatcagggctttcagccgagac
gactactttgaaaacatcttccaccaagccctggacatccacacagccacctggttcctc
tacctctccgccctgcgctggttccagatgcgaatcgacatcattttcacactgttcatc
acggcggtgacgttcatttccgtgggggtgaagggttacagcgaaggctccattgccatt
gcgctcacgctggccatgaacatcatgagcaccttccagtgggccatcaacaccagcatc
gaggtggagggcatgatgcgttccacggagcggattttgcgcttcatggacatcccggag
gagagcagtggcttcgtggtgacgccgccgccgcctgactggcccaatgccggccacctg
gaggtggtgaacctctccatgcggcactcgccgacagcgccgtacgtgctccagaacatc
tccttcaacgtccagcagggacagaagatgggaatcctgggccgcacgggcgcggggaag
agcacgctgctcgcgtgcctgctgctgcagagggacgtggagggagaggtgcgcatcgac
ggcctgtcggcgcgtaacgtggcaccctacacgtggaggtcggcgttccaggtcatcacg
cagaaaatatttatttttaccggaacgttaaggaaaaatctggatccgtacggacgatgc
aacgatgaagaaatatggaaagccattgacctggcagggctgcgcgacgtggtggaggcg
ctgcccggagggctcgacgtcatgctggtggagggcgggtgggtgctgagcgaagggcag
aagcagctcctctcgctggtgcgctgcctcctctacaaggcccggatcctgctgctggac
gagcccacggcaaacctcgaccaaataacggcacagatcatgatgaggatcattcgtaag
gaatttaaggactgcaccatcttggtctcggagcacaggatccgcgctatttacgactgc
aatcagatccttgtcctggaggacggaaaaatgagggagtacgggacggcgcagatggtg
ttcaagaagagcgccctgttccgcgagttcgtgccggacgcgggctcgttccggggacac
cccgtgaggagcagcatgaccctcagacactccatcaagcacatctccctccaggaggag
ctggccgaagacgacgtcatacaagagacgaggctctag
DBGET
integrated database retrieval system
