Lethenteron reissneri (Far Eastern brook lamprey): 133356597
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Entry
133356597 CDS
T09663
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator-like isoform X1
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj02010
ABC transporters
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133356597
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133356597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrj02000
]
133356597
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
133356597
Transporters [BR:
lrj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
133356597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
CFTR_R
SMC_N
AAA_29
AAA_23
AAA_21
DUF87
MMR_HSR1
ATP-synt_ab
MeaB
Motif
Other DBs
NCBI-GeneID:
133356597
NCBI-ProteinID:
XP_061430185
LinkDB
All DBs
Position
54:3784735..3867467
Genome browser
AA seq
1452 aa
AA seq
DB search
MSGRNLKMQASPFEKAGIFSRMFFRWPRHVLRKGYKHRIERSDIYRTPLQDQADTLSERL
EREWDREISQSENRPHLLTAIRRCFLWRFVGLGVIMLLAEFTKVVQPFFLGQIIASFNPS
TVDVQEPLLLALGLSACFVLRTLLLHPAVFGLQHLGMDVRIATFCLIYKKIMKLSSSVLD
KITVGQLVSLLSNNLNKFDESLTQAHFIWIAPIQCVGLLAFLWRELGPFCLVGFAILLIV
TLLQAWLGHKINSYRDKRGGKINERIALTSEVLENIEAIKVHGWEEAMGKLIDELRKQEL
KLTSRASYSRYFNSAAFFFSGVFVVFASILPYAVYNELTLRRVLTSVSFFNVLRMAITRS
LPWSLQMWVDATASIGKIQDFLLLKEYRPLDYNLSTTEVEIVSITASWDQIDGIVPEQGS
KVKNGIINVAATDLPFYKSYVLSDINFKLNKGEMLIVMGSFGSGKSSLLLLMLGELLPWD
GRVRHSGRLSFSSQQPWIINASVQENITLGLHLDKALLWQVLRACGLQEEIMNLPQKEKT
LIGESGFNLSGGQRARISLARAVYREADLYLLDSPFSYLDVSTEKQVFESCIDGFLAKKT
RILVTSKVEHLQRADKVLILNDGVVYFYGTFPELQKSKLEILSLIMQAERFDSCSSDRRG
SMITGVLRRGSAQSGDAAASPNAASVSEPPQGTQFPFQAQRFSVVSAAGTSVVVAIPTAG
PHEPEGRRLSLIPDTEDGKQLLPAAGAGPLHASKRRKSVLHLMLGVSAGYENTRRAARIQ
QHAPHGDPFLLPSVVPQRLPARKSLTSVAEESDDVPEDDNIKDCFVDADGEEGELASWTT
YRRYFGSSTLFGIVLCLNLVLFAIQVMVYGVGLWNLRSQEDRVNTTRPDNGTDGVQSFTD
NYYYFYIYVGLADSFFVLDPIRGLLLIHSAIRVSDTLSRGMLRAILHAPASFFLEKQPGY
IINRFSKDVAITDDQLPLAIFDYFQLFLIVLGAVTVVSAMIPWTMLVTLPLGISCMILRH
YFLRTFRQLKQMESEAKNPIFAHIVATLKGLWTIRAFSRDDYFENIFHQALDIHTATWFL
YLSALRWFQMRIDIIFTLFITAVTFISVGVKGYSEGSIAIALTLAMNIMSTFQWAINTSI
EVEGMMRSTERILRFMDIPEESSGFVVTPPPPDWPNAGHLEVVNLSMRHSPTAPYVLQNI
SFNVQQGQKMGILGRTGAGKSTLLACLLLQRDVEGEVRIDGLSARNVAPYTWRSAFQVIT
QKIFIFTGTLRKNLDPYGRCNDEEIWKAIDLAGLRDVVEALPGGLDVMLVEGGWVLSEGQ
KQLLSLVRCLLYKARILLLDEPTANLDQITAQIMMRIIRKEFKDCTILVSEHRIRAIYDC
NQILVLEDGKVREYGTAQMVFKKSALFREFVPDAGSFRGHPVRSSMTLRHSIKHISLQEE
LAEDDVIQETRL
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccgcaacttgaagatgcaggcttcgccttttgagaaggccgggatattctca
cgcatgtttttcaggtggcccaggcacgtgctgagaaagggttacaagcatcggatcgag
cgctcggacatctaccggactcccctgcaggaccaggcggacacgctctccgagaggctc
gagagggaatgggacagagaaatctcgcagtcagaaaaccgccctcacctgctcaccgcg
attcgccggtgcttcctgtggcgcttcgtgggcctgggcgtcatcatgctcctcgcggag
ttcaccaaagtggtgcagcccttcttcctgggccagatcatcgcctccttcaacccgagc
accgtcgacgtgcaggagccgctgctgctggcgctggggctgagcgcgtgcttcgtcctg
agaacgctgctgctgcaccccgctgtgttcgggctccagcacctgggtatggacgtgcgg
attgccaccttctgcctcatttacaagaagatcatgaagctctcaagcagcgtcttggat
aagatcaccgtgggacagctggtcagcttgctgtcgaacaacctgaacaagtttgatgag
agcctgacccaggcccacttcatctggatcgcgcccattcagtgcgtgggcttgctggcc
ttcctctggcgagagctggggcccttctgcctcgtgggattcgccattctgctgatcgtg
acgctgctccaggcgtggctgggtcacaagatcaactcctacagagacaagcgcggaggg
aagatcaacgagcgcatcgccctcacgtcggaggtgctcgagaacatcgaggccatcaaa
gtgcacggctgggaagaggccatggggaagctcatcgacgagctgcgcaagcaggagctg
aagctgacgagcagagcctcctacagcagatacttcaacagcgcggcgttcttcttctcg
ggcgtgttcgtcgtgttcgcctccatcctgccgtacgccgtgtacaacgagctcacgctg
cgccgggtgctcacctccgtcagcttcttcaacgtcctgcgcatggccatcaccaggtcg
ctgccgtggtcgctacagatgtgggtcgatgcgaccgcctccattggaaagatccaggat
ttcctgttgctgaaggagtaccgtccgctcgactacaacctctccaccaccgaggtagag
atcgtgtccatcacggcgtcgtgggatcagatcgatggaatcgtccccgagcaaggaagc
aaggtgaagaatggaatcatcaacgtggccgccaccgacctgccgttctacaagtcgtac
gtcctgtcggacatcaacttcaagctcaacaagggagagatgctcatcgtcatgggctcc
ttcggctcgggcaagagctcgctgctgctgctcatgctgggggagctgctgccgtgggac
ggccgcgtgcgccacagcggccgcctctccttctcctcccagcagccgtggattatcaac
gcctccgtgcaggagaacatcaccctcggcctgcacttggacaaggccctcctctggcag
gtgctgcgcgcctgtggcctgcaagaggaaatcatgaatctgcctcagaaggagaagacg
ctgattggggagagtggcttcaacctcagcggcgggcagagagcgcgcatctcgcttgcc
agggccgtgtacagagaggcagatctctatttgctcgactctccattcagctacctcgat
gtgtcaacagaaaagcaagtcttcgagagctgcatcgacggcttcctggccaagaagacg
cgcatcctggtgacgtccaaagtcgagcacctgcagagggcggacaaggttctgattctg
aacgacggggtcgtttacttctacggcaccttccccgagctgcagaagagcaagctggag
atcctgtcgctcatcatgcaggcggagcgcttcgacagctgcagctccgaccgccgcggc
tccatgatcacgggcgtgctgcgccgtggctccgcgcagtccggtgacgcggcggcgtca
cccaacgccgccagcgtctcggagccgccccaggggacgcagttcccgttccaggcccag
cggttctccgtcgtctccgccgccgggacgtccgtcgtcgtcgcgatccccacggccggc
ccgcacgagcccgagggtcgccggctgtcgctcatcccggacacggaggatgggaagcag
ctgctgcccgccgccggcgcggggcccctgcacgccagcaagcgcaggaagtcggtgctg
cacctcatgttgggggtatcggccggctacgagaacacgcggcgcgcggcgcgcatccag
cagcacgccccgcacggcgaccccttcctgctgcccagcgtcgtgccccagaggctgccc
gcccgcaagtcgctcaccagcgtggcggaagagagcgacgacgttccggaagacgacaac
atcaaggactgctttgtggacgcggatggcgaggagggggagctggcgagctggaccacg
taccgccgctacttcggcagcagcaccctctttggcatcgtgctgtgcctcaacctggtg
ctcttcgcgatccaggtcatggtgtacggagtgggactatggaacctgcggagtcaagaa
gaccgcgtgaacacgacgcggcccgacaacggcacggatggcgtccaaagcttcacggac
aactactactacttctacatctacgtgggactggccgacagctttttcgtgctggacccc
atccgggggctgctgctcatccactcggcgatccgcgtgtcggacactctgagccgcgga
atgctgcgcgccatcctgcacgcgcccgcctccttcttcctggagaagcagccaggctac
atcatcaaccgcttttcaaaagatgtggccatcaccgatgatcagctcccactggcaata
ttcgattacttccagctgttcctcatcgtgctgggcgcggtgaccgtggtgagcgccatg
atcccgtggacgatgctcgtcacgctgcctctcggcatcagctgcatgatcctgcgccac
tacttcctgaggacgttccgccagctcaagcagatggagtcggaagccaaaaacccaatc
tttgctcacattgtcgccactctgaaagggctgtggacgatcagggctttcagccgagac
gactactttgaaaacatcttccaccaagccctggacatccacacggccacctggttcctc
tacctctccgcccttcgctggttccagatgcgaatcgacatcattttcacactgttcatc
acggcggtgacgttcatttccgtgggggtgaagggttacagcgaaggctccattgccatt
gcgctcacgctggccatgaacatcatgagcaccttccagtgggccatcaacaccagcatc
gaggtggagggcatgatgcgttccacggagcggattttgcgcttcatggacatcccggag
gagagcagtggcttcgtggtgacgccgccgccgccggactggcccaatgccggccacctg
gaggtggtgaacctttccatgcggcactcgccgacagcgccgtacgtgctccagaacatc
tccttcaacgtccagcagggacagaagatgggaatcctgggccgcacgggcgcggggaag
agcacgctgctcgcgtgcctgctgctgcagagggacgtggagggagaggtgcgcatcgac
ggcctgtcggcgcgtaacgtggcaccctacacgtggaggtcggcgttccaggtcatcacg
cagaaaatatttatttttaccggaacgttaaggaaaaatctggatccgtacggacgatgc
aacgatgaagaaatatggaaagccattgacctggcggggctgcgcgacgtggtggaggcg
ctgcctggagggctcgacgtcatgctggtggagggcgggtgggtgctgagcgaagggcag
aagcagctcctctcgctggtgcgctgcctcctctacaaggcccggatcctgctgctggac
gagcccacggcaaacctcgaccagataacggcacagatcatgatgaggatcattcgtaag
gaatttaaggactgcaccatcttggtctcggagcacaggatccgcgccatttacgactgc
aatcagatccttgtcctggaggacggaaaagtgagggagtacgggacggcgcagatggtg
ttcaagaagagcgccctgttccgcgagttcgtgccggacgcgggctcgttccggggtcac
cccgtgaggagcagcatgaccctcagacactccatcaagcacatctccctccaggaggag
ctggccgaagacgacgtcatacaagagacgaggctctag
DBGET
integrated database retrieval system
