Lethenteron reissneri (Far Eastern brook lamprey): 133356740
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Entry
133356740 CDS
T09663
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrj04121
]
133356740
Enzymes [BR:
lrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133356740
Ubiquitin system [BR:
lrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
133356740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
UreE_N
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
133356740
NCBI-ProteinID:
XP_061430380
LinkDB
All DBs
Position
55:complement(10314587..10338808)
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AA seq
754 aa
AA seq
DB search
MGCTLCALRSKDEQYKLLYEVCQVGGKDSGKAAHGEEEAAVTEAALLRAARDPVVVEVLR
RGRPSLAPPRPPGGRTRTDASTQTELPASPSGPRSPATPPLPNVHPLLLAQGLCELPSEY
FDSSDYLPSMQQDAHHAEGLEYEEVDLHRGSSRERLGLTVCYRTEDEDDAGIYVSQVNPN
SIAARDGRIREGDRILQINGLDVHDRRQAVARLTQEEGTDVSLLLARPDTQLEDGWVEEE
HRAVMETLRVEILQDERMEPIAYIGSSLIQARALPDDDAGLTDSVSHGHGKDSGLGRTDE
SSEHDGGISVSAGGAPPSRAGPRGGSGVGSDLRRHLRTKAGTACGVADVRREIALLHDEL
RRFEMRVQSHGGTAAAAATAAVNVAATAAATAAATVSPHDVGAEPGLTNIAELPEGHDPD
PASAAFATAASPQADGEAGGSSPPGGRDPRHGARGSNDAGATTRARPAASAGRCRPERAA
AAAATTSADAGGAPVPLHARHYRSYMQLVQQKSAVEYAQSQLSLASLCQFERREAGAARP
LPQSASAPASPYEWKVRACGGGAAGRGGPGGADGPGAEGSRCLTARRPVRDRLLRQRALR
IREERSGVTTDDDVLSEMKTGRYWSKEQRKQQLVRAREQRRRREFMLRCRLDWLGEKVAP
AADTAAAAAAATAAATAAAAGAGDGVPAAAPPSDFAGRARELSILELSHRKMMKKRNKKI
LDNWMTIQEMLAHGQKSPDGNGKVYNPLLSVTTV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacgctgtgcgccctgcgctccaaggacgagcagtacaagctgctgtatgaa
gtttgccaggtgggcggcaaggactccggcaaggcggcgcacggggaggaggaggcggcg
gtgacggaggcggcgctgctgcgagcggcgcgcgaccccgtcgtggtggaggtgctgcgc
aggggccgcccgtcgctggccccaccgaggccaccgggcggacgcacgcgcacggacgcc
agcacgcagactgagttgccagcctcgcccagcggtccgcgcagcccggccacgccgccc
ctgcccaacgtgcatcccctgctgctggcccagggcctctgtgagctgccatccgaatac
tttgactcaagcgactaccttcccagcatgcagcaggatgcccaccatgcggagggtctg
gagtatgaggaggtggatttgcaccggggctcaagccgggagcggctcggcctcaccgtg
tgctaccgcacggaggacgaggacgacgccggcatctacgtgagccaggtgaatcccaac
agcatcgcggcacgggacgggcgcatcagagagggcgacaggatcctacagatcaatggg
ctggacgtgcacgaccggcggcaggcggtggcgcgcctcacccaggaggagggcaccgac
gtgtcgctgctgctggcacggcccgacacgcagcttgaggacggctgggtggaggaagag
caccgagctgtgatggagaccctgagggtggagattctgcaggacgagcggatggagccc
atcgcctacatcggctccagtctcatccaggcgagggcgctcccggacgacgacgcgggc
ctcacggactcggtgtcgcacggccacggcaaggacagcggcctgggccgcacggacgag
agctcagagcacgacggcggcatcagcgtcagcgctgggggcgcccccccgtcgcgcgca
gggccccgcgggggcagcggcgtcggctcagatctgcggcgccacctgcggacgaaggcg
gggacggcgtgcggcgtggccgacgtgcggcgcgagatcgcgctgctgcacgatgagctg
cggcgcttcgagatgcgcgtccagagccacggcggcaccgccgccgcagccgccactgcg
gccgtcaacgtggctgccaccgcggccgccaccgcggccgccaccgtatctccgcacgac
gtcggcgcggaaccaggactcacgaacatcgccgagctgcccgagggccacgacccggat
ccggcctccgccgcttttgcaacggcggcgtcgccacaggcggacggggaagccggcggg
agttcgccgcccggcggccgcgatcctcgccacggcgctcgcggctcaaacgacgccgga
gcgacgacccgagctcggcccgcggcaagtgccgggcgatgccgaccggagagggcggct
gcggcggcagcgacaaccagcgcggacgcgggcggcgcccccgtcccgctgcacgcgcgc
cactaccgcagctacatgcagctggtgcagcagaagtcggcggtggaatacgcacagagc
cagctgagcctggccagcctgtgccagttcgagcgccgcgaggccggcgccgcacggccc
ctgccgcagtccgcgtcggcgccggcctctccgtacgagtggaaggtgagggcgtgcggt
ggcggcgcggcagggcgcggagggccgggcggcgccgacgggccgggcgcggagggctcg
cgatgcctgacggcgcgcaggccggtgcgggaccggctgctgcggcagcgcgcgctgagg
atccgcgaggagcgcagcggcgtcaccacggacgacgacgtgctcagcgagatgaagacc
gggcgctactggagcaaggagcagcgcaagcagcagctggtgcgggcacgcgagcagcgg
cggcggcgcgagttcatgctgcgctgccgcctcgactggctcggggagaaggtggctccg
gcagcggacacggcagcagcagcagcagcagccacggcggcggccacggcggccgctgcg
ggcgccggtgacggagtgccagcggccgcgcctccctcggactttgctggccgcgcgcgt
gagctgagcatcctcgagctgagtcaccgcaaaatgatgaagaagcgcaacaaaaagatt
ttggacaactggatgaccatccaggagatgctcgcccacgggcagaagtcgcccgacgga
aacggcaaggtgtacaaccccctgctgtcggtcaccaccgtgtga
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