Lethenteron reissneri (Far Eastern brook lamprey): 133356748
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Entry
133356748 CDS
T09663
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lrj03037
]
133356748 (CFAP54)
Cilium and associated proteins [BR:
lrj03037
]
Motile cilia and associated proteins
Sperm associated proteins
133356748 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
TPR_2
Motif
Other DBs
NCBI-GeneID:
133356748
NCBI-ProteinID:
XP_061430386
LinkDB
All DBs
Position
55:complement(1408786..1475244)
Genome browser
AA seq
3225 aa
AA seq
DB search
MASRGSAAADDAVAVAVAVAGGGGPLVARTRGPAAPRALEQELGALLGSLRRERGETGPR
RSNMLFAIWNKYEHKISTELFRNKLLSTGDILVELKNHKMALNLCYGRYLQYIYPSPHDI
GNLSELMARFFPRELGDSDCVPTVRALLGFCTCQFALLVAGGGGGEMKRRCLQLLFLLRL
LTQALLQDEQLCWLLYNGTVHIYTISRHLMEHGHSAKVCEYLLWASVCMESSVPLLDVRY
LSWRATLYTAVCQAYYDCKLPAQAEEFARRGLAKIAELSELESQSSSPHSNQAESAFRDA
TIKMAIMIFKHTVFESRKKPKGFLRTRMKTNLRDPKIAQAAWPRTGTERLLSELLEGGAA
QMVAVLDALSHRAAEECAPHALAGSPAAAFDHDSAEVSAELFFAGAEIIAGGGGNSERRG
AILSSNVLAGIRDGQSLMELAVAGEDGVTEEATVRFLKLAFLCERWDIFEGLISPTLGYL
QTKGTTGRGELHQTLELLQTLEPLLSGRRTKHAGLTSAMDSSMDEQTFANGARPKTAWSL
DELLTAVEKLNAATESLHATADLTSKAVQEERSLLTDASAQLWHGCKAALSRVQMRGAND
SARHRVKTDSLTKLCRALCSLHGTMCVLGVAQKDLLALVEASLRLSALLQSSAEQTLRHA
SAQASSEADRSASSQRSLQTDMVTSYREQLWLAFVALSRALDEVGVARGLTRPRGGSAIT
SMDPSRGDAEGCEPGMESSTRTALEEDLHLEMLWERHRVALKLLHMQQPTSKADGGQLKK
PGRSCRECIPKQPGTDSSLTEEDVLATVGRNPLSKAAFIMQKALLEASAPAKAPSEVAKM
LEGAAGLIRKAEMEKSGFHLPGRGTPRGQGAVPPPPLLLRCGERGAVFTPVPFSGSPQVV
WYRLLGRTAAGHNVKVRLSDYHLQATGEEVLAGEGCLLRAEGLQPNEKYVFAVAAYARDG
SLVGGTIGETTRPILASCPLPTLLAWAYLAQVAFQTRCFTIARSACTLLWDHFVSSPESE
SDSEDSVKRWRLREEAVSGASPILLRLFVSSVFISCDVTMGGASVSSEKRVPLQWQSARL
EECARVLVALELCHHHLDEPALTLQAGATCHGLLAPFMYHGVTSRAAAKVLWLCLDMIKA
VPASVRVRKQAGFSESLQHMVAKMSNYLAKAHCEWNEPDIAGDALELGKRLLREDLDGLA
LPSSLEMPRATDRQDVGSSTLLESSIGKRLTIKKQLAPKEERNFTAELNALEAFALKISK
QDVKADLTGLEDPMVLHSCIAKLPLKMAHKEVMKFHRHPRFLEFFVHLLNRALSEDAVEL
AVEWGEDIQVWLIRRNELILGLKPELEKMTGLIRVGTDDPRKQASIIADYHKSLEPQLTS
RSTVAPKRSVPGKLSRQRESKKQHEKKALEQLTGALTSFVRPLIHRQRLRQVCTKECLWR
SRFNQLLGWCHLTLFLRKCEWVQRHNKPGLWSDAAVDSNIFSLEASGVVVAMPEVPATAR
DGAKETEVTRAVTAQKSASSQRRVLAMMKVAGSNGGSDDEHDDDDDDDDDDCDGGGDGSG
RSGSSSADSSHGEARSKRTRRSAGKDDDPGASLVELTERLTAACTHLRRAVVLAHRGGHR
SLLWDVSRSLLDCVRSSHESQRLEEDDGGGGGGACHVPARTQREVVWFPLFLAADSMLDR
VTRTQGRPKDNTVDEEQDYDDDDGDGLEGGDAERTAMMDLRSLVLRALETLHRQCKWEHL
AHLALRFNDLTRNRHAEQVTPLLVHAQWRLLERVRDSGGPEPPQPHLLLLAEQQGGQKST
SHNFVGEQPIVATMSRDSIEPGMLIDPAGRNLYAGGLRARQLACVPLHVDDTLRRFRESL
SRRPYAHRALAHCRRLLALFLASALGGGAVADRRGEGRTSVRASGLTVAFRLPATHSHDP
SPPDLASRDFSSAEDVEWPPLPRAQINIVISAYTKTVELLESDKQQRLRAHALHELGNLH
YHSGNTRAAFTCWSQALDASLGISDCLGSWSDAVARAAGKEASGDASSALLRLGGVRGCL
LAAVLASKIAQFILTADFAVRIRCSVLASMLFKAIFRASLPHPKADVDYARYEVDGGQGS
PVPGVEPLTPSPTPGGGSLDVGTIVSCLSFLARHLHRAGLLLPVLPLLALYQHLVCSICR
DVQRSVEGRLLKVNVLTDLALFGDASREMCTVLLGEKLPLPVFPGFKAIDSKPVAAAAVV
VVASMQLDTSKAILTDGNLQAVELLLTQPLSPALESALGPRLCYRVSLTRARLLVRLAAA
LGGLPPPRAALYGLFTPPRETGSESDLSSDSSSQLSARTRPSSRGSAARDEELVWQLVAH
KDQLTPEVVKGILLLEAEAVLGSVDRALVAARHGIGDRRSLRPSQLEEAVLVHLEAARVA
LERHWAPVSAARAISAMKLLQEARALGAETAIEVGGWRLRDQERDVEARGRLDLRLWLEC
RLMVATALTQWQPDPAAGLGDADARRFCKEGLAESEACGDVETQAEFMSLSALLDFHECR
PIAGIRSTLQAILELLDRPAEMLSQRAHLLLAEVTARLADLACAVDEGPETELRQQDHAV
EKDDNDLPKLSAPDGGSLPFMAESLSLCLKAEQIVLSQVRELGFVGDISNSYLPHVNMLA
KIKLRIGCFQAVESSQALAPQGGDGSEWLRALHTLDSALRLCHSASTQDRDLAAEILLQR
GNVECRIALGGHCDPRTAVRTLLKSVDVSQGASHQLWIMKQAYLEAALLFCRLSEKTRAS
EAHTEQDAVAEKGKTDPAKQPNKSKVVVRGRSQALAERGLSVSERYSLLAWIATRAATQV
GECCLAWGRLLSDQSGDVLGREVALHLPEFMLLDLVASHSLAAPDAAEPTLGFRDETVSR
CRSRAATLTWAQVLRYRGAIVRRTDLASQLDYFPGRRRAAIGGCLVRSPLNLGSCRLFLR
AGAVHRFLAERLAAYAAGPCRAPPAPQQLLHTPPHAPSAASQELADALAKADSLTGLVMM
QPLTPPTVQGGEGASETDPAFGAKSNELCLQWHQPLLEPLRPTKEVMLFTASNTRPFRVI
DVRTCGAADASCTCRPVLLSRLHALSPRLASLRSQGSLLAADEPSSSPHPPALPLPVPPG
HGSTVGERQKPAAARLKAAAGADGANLGTVKLQDLARECAAEIQRLLGSHADSEPLSEMP
FDLSHNALRSLEATFSTASGFRVTEGRLHDWLGKLLSQMPNGLRQ
NT seq
9678 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggggctcagcggcagcggacgacgccgtggcggtggcggtggccgtggcc
ggcggcggcggccctctggtcgcgcgtacccggggccccgcggctccccgggccctggag
caggagctcggggcgctgctgggatccctgaggcgggagcgaggcgagacggggccgaga
cgctcgaacatgctgtttgccatatggaataagtacgaacataaaatctcaactgaatta
ttccgaaacaagcttctcagcaccggggatatactggtggaattaaaaaaccataagatg
gcgttgaatctgtgttacggacgatacctccagtacatctacccatctcctcatgacatc
ggcaacttaagcgaactgatggctcgcttcttcccacgagaactcggtgacagcgactgt
gtacctacggtacgtgcattgctgggtttctgcacgtgccagtttgctttactggtggca
ggtggtggtggcggcgagatgaagcgcaggtgcctgcagctgctgttcctgctgcgcctc
ctcacacaggcactgctgcaggacgagcaactttgctggctcctctataatggcaccgtt
catatatacaccattagcagacacctcatggagcatggccattctgcaaaggtgtgtgag
tacttgctgtgggcgagcgtgtgcatggagagctcggtgcctctactggacgtgcgctac
ctgagctggcgagcaacgctgtacacagccgtttgccaagcgtactacgactgcaaacta
cctgcacaggcggaggaatttgcgaggcgtggtctggcgaagatagccgaattgagtgaa
cttgaaagccagagttcatctccccactccaatcaagctgagagtgctttccgtgatgcc
accatcaagatggccattatgattttcaagcacacagtctttgaatccagaaagaagcca
aaagggtttttgaggacgagaatgaagacgaacttgcgcgaccccaaaattgcgcaggcg
gcatggccccgcacaggcaccgagcggttgctgtcggagcttctggagggaggtgcggca
caaatggtggccgtcttggacgccctgtcgcaccgggccgctgaggagtgcgcaccccac
gcgttggcagggtctccagccgccgccttcgaccacgactctgcggaagtctctgcagag
ctcttctttgccggagcggagatcattgcaggaggtggaggaaattctgaacgcagaggg
gccatcctgagctccaacgtcctggctggcatcagagatggacagagtctcatggaattg
gcagtcgccggcgaggacggtgtgactgaggaggcaacggtccgtttcctcaagctggcc
ttcttgtgcgaacggtgggacatatttgagggcctcatctcccccacactcggctactta
cagaccaagggcactacaggacgaggagagctccaccagaccctggagctcttgcaaacc
ttggagccactcttgtctggacggagaacaaagcacgcgggactcacgtctgccatggac
tcctccatggacgaacaaacgttcgccaatggggcaagaccgaagacagcttggagtttg
gatgaactgctcacagcagtggagaaactgaatgctgctacagaaagcctgcacgctaca
gctgacttgacatcaaaggcagtgcaggaggagcgttctttactgacggacgcttctgca
cagctttggcacggatgcaaagctgcgctgtcgcgggtgcaaatgagaggagcgaacgac
tccgctcgacatcgggtcaagaccgacagcctcactaagctgtgccgagcactgtgttcg
ctgcacgggaccatgtgtgtgctgggcgtggcacagaaagatctcctggccttggtcgaa
gcttctctccgtctttccgcactcctacagagcagcgctgaacagactttgcgacatgcg
tcagcccaggcaagcagtgaggctgacaggtcggctagcagccaacgcagccttcaaaca
gatatggtcacgagctaccgcgagcaactgtggctggcatttgttgctctgagccgggcc
ctggatgaagttggtgtcgcgcgaggactcactcgaccccgcggtggctcagccatcacc
tccatggacccgagcaggggtgatgctgaggggtgtgaaccgggtatggagtcgagcact
cgcacagcactggaggaagatctgcacctggagatgctgtgggagaggcatagggtggct
ctcaaactgttgcacatgcagcagccaacctccaaagcagatggcggtcaactcaaaaag
ccggggagaagttgcagagagtgcattcccaagcagcctggcactgatagcagcctcaca
gaggaagatgttctagcaacagtcggacgcaatcccttatccaaggcagcgttcatcatg
cagaaagccctactcgaggcttctgctcctgccaaggcacccagtgaagtcgctaagatg
ttggagggtgcggctggcctcatccgcaaggcagagatggagaagagcggttttcatctg
ccgggacgtggcacgcccaggggtcagggggccgtgccacccccgcccctcctgttgcgg
tgtggagaacgcggcgcggtgttcacccctgtgcccttcagcggctcaccgcaggtggtg
tggtaccgactgctcgggcgcacggccgcgggacacaacgtgaaagtgcggctcagtgac
taccacctgcaggccactggagaggaggtgctcgcgggcgaagggtgcctcctccgtgcc
gaggggctgcagcctaacgagaagtacgtgttcgcggtggcggcatacgctcgcgacggc
agcctggtggggggcaccattggggagaccactcgccctatcctggcatcgtgccccctg
cccacacttttggcatgggcctatctggcgcaggtggctttccagacgcgatgtttcacc
atcgcgaggtcagcatgcacactgctctgggatcattttgtgtcctcgccagagtctgaa
tctgactctgaagactctgtgaagcggtggaggctgcgggaggaggcagtgagtggggcg
tcgcccatccttctcaggctgttcgtgtccagcgtcttcatctcgtgtgacgtgaccatg
gggggtgcatctgtctcctcggagaagcgcgttcccctgcaatggcagagcgcccgtctg
gaggagtgcgcacgtgtgctggtggcgctggagctgtgtcatcatcatctggacgagccg
gcgctgaccttgcaggccggggccacgtgtcacgggcttctggcgcctttcatgtaccac
ggcgtgacttcaagagccgcggcaaaggtcctctggttatgcctggatatgataaaggca
gtcccggcatctgtccgtgtgcgcaagcaagcgggcttcagtgagagtctccagcacatg
gttgcgaaaatgtcaaactacctggccaaggcgcactgtgaatggaatgagccggacatc
gctggtgatgccctggaattgggaaagcgtctccttcgagaagaccttgatggcttggcc
ctgccctcgtctctcgagatgcccagggcgaccgacaggcaggatgttggcagtagcaca
ctgctggagtcaagtatcggaaaaagactcacgattaaaaagcagctggcacccaaagag
gaacgcaactttactgctgaattaaacgcattggaggcttttgcgctaaagatctcgaaa
caagatgtcaaagcagatctcacaggacttgaagatccaatggtgctgcattcatgtatt
gcgaaactacctcttaagatggcgcacaaggaagtgatgaagttccaccgacaccctcgt
ttcctggagttcttcgtgcatttgctcaaccgagctctttctgaggacgcggtggagttg
gcggtggagtggggtgaagacattcaagtttggctcatcagacggaatgaattgattctc
ggcctcaaaccagagctggagaagatgacagggcttatcagagtgggcacggatgatcca
aggaaacaggccagtatcattgccgactaccacaagagcctggagcctcagctcacaagc
agatccaccgtggccccaaagagatccgtcccagggaaattgtcgaggcagagggagagc
aaaaagcagcacgagaagaaggctctggagcagctgacaggagcgctcacgagcttcgtt
cgaccgctcatccatcgccagcgactccgccaggtgtgcacaaaggagtgtctctggcgg
agtcgctttaaccagctgctgggctggtgtcacctcactctcttcctgcgcaagtgcgaa
tgggtgcagagacacaacaaaccggggctctggagcgacgcagccgtggactccaacatc
ttctcgctggaggcgtcaggggtcgtggtggcgatgccggaagtcccagccacggctcga
gatggcgccaaggagacagaagtcaccagggcggtgacggcgcaaaagtccgcgtcctcc
caacgccgcgttctggccatgatgaaggtcgctggcagtaacggagggagcgatgacgaa
cacgatgatgacgacgacgacgatgacgacgactgtgatggtggcggcgacgggagcggg
aggtcaggatccagctccgcggactcgtcgcacggagaggcgaggtccaagagaactcgg
aggagcgccggaaaggatgacgatcccggggcttcgctcgtcgagctgacggagcgcctc
acggcggcctgcacgcacctccgcagggccgtcgtgctcgctcaccggggcggtcaccgc
tccctgctatgggacgtgagccgctcactcctggactgcgtgcgctcctcccacgagtcc
cagcggctagaggaagatgacggcggtggcggcggtggcgcttgtcacgtgccggcgagg
acccagcgagaggtcgtctggtttcccctcttcctcgccgccgactcgatgctggatcga
gtcacgcggacgcaaggacgacccaaagacaacactgtggacgaggaacaagactacgat
gacgatgatggcgacggtttagagggaggcgatgccgaaaggacagccatgatggacctc
cgatcgctggttctgcgggctctggaaactcttcatcggcagtgcaagtgggagcacctg
gctcatcttgcgctgcgtttcaacgatctcacacggaatcgtcacgcggagcaggtgaca
ccgctgctcgttcacgcacagtggcgcttgctggagcgcgtcagagacagtggcggcccc
gaaccaccacagccccacctcctcctcctcgccgagcagcagggcggacagaagagcacg
agccacaacttcgttggagagcagccgattgtggcaaccatgtccagagactccattgag
ccagggatgctcattgacccagcgggacgcaacttatatgcaggagggttgcgtgcgcgc
cagctcgcatgcgtccctctccacgtcgacgataccctgcgtcgcttccgcgagtctctc
tcccgccgcccgtatgcccaccgagccctcgctcactgccgccgcctgctcgcactcttc
ctggcgtcggcgctcggtggaggagcggtggcagaccggcgaggtgagggtaggacatcc
gtgcgagcgtcgggcctcacggtggcattccggcttccagctacgcatagccacgacccc
agcccgcccgacttggcgagtcgagacttctcctcggccgaagacgtggagtggcctccc
cttccgcgggcgcaaatcaacatcgtgatttccgcctacaccaaaaccgtggagctactt
gagtcggacaagcagcagaggttgagagcgcatgcgctgcatgagctggggaatctgcac
taccactctggcaacaccagggctgcattcacttgctggtctcaggctctcgatgcgtcg
ctgggtatcagcgattgtctcgggagctggagcgacgccgtggcacgggcggccgggaag
gaggcttcgggcgacgccagctctgcgcttctccgtctgggcggcgtacgcgggtgtctg
ctagcggcagtgctcgcctcaaagatcgcgcagttcatcctaacggcagactttgccgtg
aggatacggtgcagtgtacttgcatcgatgctgtttaaggccatctttcgcgcatctctc
ccgcacccgaaggcggacgtggactacgctcgctacgaggttgatggcggtcaaggttcg
ccggtacccggggtcgagccgctgacgccgtcgcccacgccgggcggcggaagcctcgac
gtggggaccatcgtgagctgcctgagcttcctggcgcggcacctgcaccgtgccggcctc
ctgctgccggtccttccactgctggccctttatcaacacctcgtgtgctccatctgccgg
gacgtgcagcggagtgtggagggcaggctcctcaaggtgaacgtgctgacggacttggcg
ctgtttggagacgcgtcccgcgagatgtgcaccgtcctcctgggggagaagttgcccctg
cccgttttccccggcttcaaggcgatcgacagcaagccggtggctgcggcggcagtggtg
gtggtggcaagcatgcagctggatacctcgaaggcaatcttaacagatggaaatcttcag
gcggtggagctgctgctgactcagcccttgtctccggcgctcgagagcgcccttgggccc
cgcctgtgctaccgcgtgtccctgacgagggcccgcctgctcgtccgtcttgcggcggcc
cttggagggctgcccccaccccgcgccgccctctacggcctcttcactccgccccgagag
acaggcagcgagagtgacctctccagtgactcctcgtcccagctgagcgctcgcacgcgg
ccgtcgtccagaggctccgccgcgagggatgaggagctcgtgtggcagctggtggcccac
aaggatcagctgaccccagaggtcgtcaagggcatcttgctgctggaggccgaggcggtg
ctggggtccgtggaccgggccctcgtcgctgcgcggcacgggatcggcgatcggcgctca
ctgcggccctctcagctggaggaggcggtgcttgttcacctggaggcagcacgcgtagcc
ctggagagacactgggcacccgtcagtgcagccagggccatctctgccatgaagctgttg
caggaggcgcgggcgctgggagcggagacagcgattgaggtcggaggctggaggctcagg
gaccaggagcgggacgtggaggcgcgtggacgcctggatctgcggctctggcttgagtgt
cgactgatggtggcaacagcgctcacacagtggcagccagaccctgctgcagggcttggt
gatgccgacgcccggaggttttgcaaggagggcctcgctgagagtgaggcgtgcggagat
gtcgagacacaggcagagttcatgtccctctctgccctgctcgacttccatgaatgccgt
cccatcgcaggcatcagaagtacactgcaggccatcctggagctgctggatcgacctgct
gaaatgctctcccagagggcccacttgcttctggccgaggttaccgcacgcttagcggac
cttgcatgtgcggttgacgagggccccgagacggaactccggcagcaagaccacgcagtg
gaaaaggatgacaacgacctcccaaagctcagcgctcctgacgggggatcattgcctttc
atggcagagagcctgagcctctgcctaaaggctgagcagattgtcttaagtcaggtaaga
gaactcggctttgttggggacatcagtaactcctatctaccacacgtcaatatgctggcc
aagattaagctaaggataggctgcttccaggccgtggaatcgagccaggcgctcgctccg
cagggaggggatggctccgagtggctccgcgcgctccacacgctcgactctgcgctgcgt
ctctgccactcggcctccacgcaggatcgcgacctcgccgccgagatcctgctccagaga
ggcaacgtggagtgcaggatcgcgctgggaggtcactgcgacccacggaccgccgtgcgc
acgctgctcaagtccgtggacgtcagccaaggcgcctcgcaccagctgtggatcatgaaa
caagcctacttggaggcggccctgctcttctgccgtctgagcgaaaagactcgggcgagc
gaggctcacacagaacaggatgcggtggccgagaaagggaagacggatcctgcaaagcag
ccaaacaagtccaaggttgttgtgcgaggccggagtcaagcgctggcggaacgggggctg
tcggtgtcggagcgctacagcttgttggcatggatcgccactcgggcagccacccaggtg
ggcgagtgctgcctggcgtgggggaggctcctctccgaccaatcgggggatgtcctgggg
agagaggtcgccctccatctcccagaattcatgcttctggacctggttgcttcgcacagc
cttgctgcgcctgacgcagcggagccaacgctgggattcagggacgagaccgtgtccagg
tgtcgctcccgagccgccaccctcacctgggctcaagtgttgcgctaccgaggagcgatc
gttcgtcgtacggacctcgcctcgcagctcgactacttccccgggcgccggcgggccgcc
atcggcggctgtctcgtccgatcgccgctcaacctcgggagctgccgcttgtttctgcga
gcgggagccgttcaccgcttcctggcggagcggctcgcggcgtacgcggctgggccgtgc
cgcgcaccccccgcgccgcagcagctgctgcacactccgccgcacgcccccagcgcggct
agccaggaattggcagacgcgctggctaaggctgactcgctgacgggtttggtgatgatg
cagccactcacgccaccgactgtccaaggaggagagggggcttccgagacagaccccgca
tttggagccaagagcaatgagctgtgcctgcagtggcaccagcctctgctggagcccttg
agaccgaccaaggaggtgatgctgttcaccgccagcaacacgaggccctttcgcgtcatc
gacgtcagaacgtgcggtgcggccgacgccagctgtacctgccgccccgttctgctctcc
aggctgcacgcgctgagccctcgcctggcgtcgctgaggtcgcaggggtccttgctcgcg
gcagacgaaccctcctcctcgccacaccctcccgccctaccgttgcccgtgcctcctggc
cacggatcgaccgtcggggagaggcagaagccggcggcggcgcggctaaaagcggcagct
ggcgccgacggagcgaaccttggcacggtgaagctgcaggacctggctagggagtgcgct
gcggagattcaacgcttgctgggttcccacgcggattccgagccactttcagagatgccc
tttgacctttcccataatgccttgcggagtttggaggcaacgttcagcacagccagcggg
ttccgcgtgacggaggggcgacttcacgactggctcggcaaactcctgagccagatgccg
aacggcctacgacaataa
DBGET
integrated database retrieval system
