Lethenteron reissneri (Far Eastern brook lamprey): 133356782
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Entry
133356782 CDS
T09663
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133356782 (SMARCAL1)
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133356782 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
FAD_oxidored
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
133356782
NCBI-ProteinID:
XP_061430444
LinkDB
All DBs
Position
7:5673534..5687372
Genome browser
AA seq
1006 aa
AA seq
DB search
MVPTGITEEQKRRMEENRRKALAKRAERLAAAGLGPPQAASGGPRASQGGQTGQGLVGTT
GRVLEVRANQGVNGSPAQPPLNVGGSVGGSLGGSVGGSLGGSVGGSLGVSVGVSVGVSVG
GSAGVSVGGSAAAERCGQSGPHESPGSNPQLLPGQGTGGFLPPSDVAKLWSNINSVKSGV
SPMGTAAAVTTGSAAPGEATFGKKKTFQTPPLLDRKSLQCPADNGAASTPATRFYSASSA
RPGGEPRVPSAPAVTPPVSEPLGGGGSGSGPQRRNVVRGRCLELPNNRFKIEVGYKSELI
ALFKRVPSRLYDLEGKTWSFLLEDHDSLMSAVQHIPGVEICPLEGRECPGLQQQQPDGTP
TGGGGGGPSRGLGLPRTASTIMLVGHGWKKPPSMAVTARGRCVLVGRSRFEVDVTYHAEA
IGIFKQIESRSYDAVTRKWNFLLEDYCELMPQLCRCAGLEVEPLPEALVRTFLPQFERSR
ATREPFRDIDLTAVGETLTGSLMPFQQEGVNFAIAQEGRVLIADDMGLGKTIQAICVAAF
YRAEWPLLVVAPSSVRFTWAEAFRRWLPWLDPQQINVVVTGRDNPNSGLVNIISYDLLSR
IQGKLEEKGFAVIIADESHFLKNVKTVRCKAALPLLKKARRVLLLSGTPAMSRPAELYTQ
VAAVQPQIFPKFHEFALRYCNAKQMPWGWDYTGSSNMAELRLLLEETVMIRRLKADVLSQ
LPAKQRKMVVVAPGVIDAKAKAALAAAAKAMDRAGKQSKTQEKEALMLFFSKTAEAKVSA
IVEYVSDLLESGRAKFLVFAHHRVVLDALSAHLGKKGVGYIRIDGSTASAERQALCERFQ
RDDAIKVAVLSITAANMGITLSAADLVVFSELFWNPGVLIQAEDRVHRIGQLCCVNVHYL
VARGTSDDYLWPMVQEKLRILGEAGLCGDSFKNTQSTAYSVKDPKQQSIMELLWLCGDEP
DDAALAAALDDHAKDGGCTATDAMATASTSESPSKKRKIEDWFQKK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccacgggaatcacggaggagcagaagcggaggatggaggagaaccggaggaag
gcgctggccaagcgtgccgagaggctggcggccgcggggctggggcccccgcaggccgcc
tcgggaggtccacgggctagccagggaggccaaacaggccagggtctggttggcaccacg
ggacgagttttggaggttcgcgccaaccaaggtgtgaacgggagtccggctcaaccgcca
ttgaacgtggggggctcggtggggggctccttggggggctccgtggggggctccttgggg
ggctcggtggggggctccttgggggtctcggtgggagtctcggtgggggtctcagtgggt
ggttcagcgggggtctcagtgggtggttcagcggcagcagagcggtgtggtcaaagcggg
ccacacgagtcaccagggagcaatccgcaactgctgccgggacagggcacgggagggttt
ctccctccgtccgacgtcgccaaactctggagcaacatcaactcggtgaagagcggcgtg
agcccaatgggcaccgccgctgccgtcaccactggtagcgccgcgccgggtgaagcgacg
ttcgggaagaagaaaacgtttcagacgccgcccctgctcgacaggaagtcgctgcaatgt
ccggcggacaacggtgcggcgtccacgccagcgacacgcttttattccgcgagcagtgcg
cgccccggtggcgagccccgcgtgcccagcgcgccggcggtaactcccccggtgtcggag
ccgctggggggcggagggagtggcagcggaccgcagcgccgcaacgttgtgcgaggccgc
tgcctggagcttcccaacaatcgtttcaagattgaggtcggctacaagtccgagctcatc
gccctgtttaagcgagtgcccagccgcctctacgacctagaagggaagacgtggagcttc
ctgctggaagaccacgacagcctcatgtcggcagtgcagcacatcccaggtgtggagatc
tgcccgctggaggggcgcgagtgcccagggctccagcagcagcagccggatggcacccca
acgggtggcggaggaggtgggcccagcaggggcctcgggttgccccgcacggccagcacc
atcatgctcgtgggacacggctggaagaagcctcccagcatggcagtgacggcgcgcggg
cgctgcgtgctggtggggcgctcgcgcttcgaggtggacgtcacgtaccacgccgaggcc
atcggcatcttcaagcagatcgagtcacgcagctacgatgctgtcacgcggaagtggaac
ttcctcttggaggactactgcgagctgatgccgcagctgtgccgctgtgccggattggag
gtggagcccctgccggaggcgctggtgcgcacgttcctgccgcagtttgagcgcagccgg
gcgactcgcgagcctttccgggacatcgacctcaccgcggtgggggagaccctcacgggc
agcctcatgcccttccagcaggagggggtcaactttgccatagctcaggagggccgagtg
ttgattgccgatgacatgggtctgggcaagaccatccaggcgatctgcgtggccgccttc
taccgggccgagtggccactgctcgtggtggccccctcctccgtccgcttcacctgggca
gaggcgttccggcggtggctgccttggttagacccccagcagataaacgtggtggtgacc
ggccgcgacaaccccaactcggggctggtgaacatcatcagctacgacctgctgagcagg
atccagggcaagctggaggagaagggcttcgctgtcatcatcgcagacgagtcccacttc
ctgaagaacgtgaagaccgtccgctgtaaagccgccttgcccctgctcaagaaggcgcgg
cgcgtgctgctgctgtccggcaccccggccatgtcgcgccccgccgagctctacacgcag
gtggcggccgtgcagccgcaaatcttccccaaattccacgagttcgcgctgcgctactgc
aacgccaagcagatgccgtggggctgggactacacgggctcgtcgaacatggcggagctg
cgcctgctgctggaggagacggtgatgatccggcgcctcaaggccgacgtgctgagccag
ctgccggccaagcagcgcaagatggtggtggtggcccccggcgtcatcgacgccaaggcc
aaagcggcgctggccgctgccgccaaggccatggacagggccgggaagcagtcgaaaacc
caggagaaggaggcgctcatgctgttcttcagcaagacggccgaagcgaaagtctctgcc
attgtggagtacgtgagcgatctgctggagagcgggcgagccaagttcctggtgtttgct
caccaccgcgtggtgctcgacgcgctctccgcacacctcggcaagaagggcgtgggctac
attcgcatcgacggcagcaccgcctcggccgagcggcaagcgctgtgcgaacgcttccag
cgcgacgacgccatcaaggtggccgtgctctccatcacagccgccaacatgggcatcacg
ctctccgccgccgacctcgtcgtgttttccgagctcttctggaaccctggggtgttgatc
caagcggaggaccgcgtgcatcgcatcgggcagctgtgctgcgtgaacgtgcactacttg
gtggcacgcggaacctccgacgactacctgtggccgatggtgcaggagaagctgcggatc
ttgggcgaggccgggctctgtggcgacagcttcaagaacacgcagtccacagcctactct
gtgaaggaccccaagcagcagtcgatcatggagctgctgtggctgtgcggggacgagccc
gacgacgccgccttggctgccgccctggacgaccacgccaaggacgggggctgcacggca
accgatgccatggcgacagccagcacgtcagagagccccagcaagaaaaggaaaatcgaa
gactggtttcagaaaaagtaa
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