Lethenteron reissneri (Far Eastern brook lamprey): 133356959
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Entry
133356959 CDS
T09663
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133356959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133356959
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
133356959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
133356959
NCBI-ProteinID:
XP_061430665
LinkDB
All DBs
Position
56:complement(2175081..2209082)
Genome browser
AA seq
898 aa
AA seq
DB search
MKRTPSKGEGPEIKREKSHKRRGRHPKSQNSPSHRFSWDDYLKETGGISAPPSCFKQRPS
PPRNEFAGGMKLEARDPRNPNSVCVASVVSVTGSRLRLRLDGSDNANDFWRLVDSAELRP
VGACERAGGMLQPPLGFRMNASSWPMFLLRTLNGAEMAPGRIFHPEPPSPTQNGFRVGMK
LEAVDRKNPHLICPATVGEVRGDEIFVTFDGWRGAFDYWCRHDSRDIFPAGWCQASGDNL
QPPGHKVAPTPKPAPVIRSVRTETVPATPPSANNRDSALPATTLTTSASAVSAASAASTA
TAAMAAASSASSASHSAAAAAVQGRGSNSSAVINSGVGGGGAAATMTAGGGGIATATGNS
GGAALPGSKTVKERRKPGRPPGSRNKAKPLERPSHGGGGGGGGGGGGGGGGGGGAGMLWA
TVRGGLHSSNNKKRGPKPGTRRRRGTPQPAMSLSGPQCGPLAIGGGGPGPSVPDPLGPSL
VRGLPARTPAPSTMQTGLSTVCVYVNKRAGAGPFLDRRKVQLLPEHFGPGAAPAVLQLAV
QACVDCARHPPHVLARLPNGDGDTIVTARYDGEVRSLRLPSVRSASFVLRFLEKLCHSLE
CDNLLSSQPACLASSNVLPGRDDVDLARGIKRPSQEPFNSPLSPKRPRPLQHLPSEGEPR
VAEGLTGDSLQRPSLETQDSALNALAVLQAPRRRPAPPSSLDVPRLLQRQFPPRHHHHHH
LQQQLHRQQQQQHRHQHHQQHRQQQLHLATRRREEGFLLRDGGKLNRQASSGSGSGGQFE
GGRGSPCSPSQNAAGRRSSSSSSTSGTRRLSLLVAAGADAEGTSRDPSGWSVDDVMSFIR
TADPTALAPHAELFRKHEIDGRALLLLKSEMMMKYMGLKLGPALKLAYHIDRLRQGKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacaccgagtaaaggggagggaccggagataaagagagagaaatctcacaag
cgacgaggaagacacccaaaatcacaaaactcgcccagccatcggttcagctgggatgac
tacctcaaggagaccggggggatttctgctcctccttcttgctttaagcagcgcccttcc
ccgccgcggaacgagtttgcgggcggcatgaagttggaggcgcgggaccctcggaacccc
aactcggtgtgcgtggcgagcgtggtgtcggtgaccggctcgcgccttcgcctgcgcctc
gacggctccgacaacgccaacgacttctggcggctcgtcgactcggccgagctgcggcct
gtgggggcctgcgagcgcgcggggggcatgctgcagccccctctaggattccgcatgaac
gcctcctcgtggccgatgttcctgctgaggacgctgaacggcgctgagatggctcctggg
cggatattccacccggagcctccgagcccgactcagaacgggttccgcgtgggcatgaag
ctggaggcggtcgatcgcaagaacccgcacctcatctgcccagcgacggtgggcgaggtg
cgcggcgatgagatcttcgtgacgttcgacggctggaggggcgccttcgactactggtgc
cggcacgacagcagggacatcttccccgccgggtggtgccaggcgtccggagacaacctg
caaccgccagggcacaaagtggcccccaccccgaagccggctccggtgatccgctccgta
cgcacagaaaccgtcccggccacccccccatcggccaacaaccgcgactcggctctcccg
gcaactacgctcacgacctcggcgtcggcggtgtcggcggcgtcggcggcgtcgacggca
acggcggcaatggcagcggcgtcgtcggcatcgtcggcgtcgcactcggcggcggcggcg
gccgtccagggcagaggtagcaactcctccgccgtcatcaacagcggcgtcggcggtggc
ggcgccgcggcaacgatgacggcgggcggcggcggcatcgccacggccaccggcaactcc
ggcggcgccgcgctaccggggagcaagacggtgaaggagcgccggaaaccaggccgcccc
cccggctcgcgcaacaaggcgaagccgctggagcgaccgtcgcacggcggtggtggtggc
ggtggtggcggcggcggcggtggtggcggtggtggcggtggtgctgggatgctgtgggcc
accgtacgcggcgggttgcacagcagcaacaacaagaagcgcgggcccaagcctgggaca
cggcgaaggcgtgggactccccagccggccatgagcctgtcgggcccccagtgtgggccg
ctggccatcggcggagggggccccggaccctcggtgcccgaccccttgggcccctccctt
gtgaggggcctcccggcccggactcctgccccctccaccatgcagaccggcctctccacg
gtctgcgtgtacgtgaacaagcgcgccggcgcgggccccttcctcgaccggcgcaaggtg
cagctgctgcccgagcactttgggcccggggcggcgccggccgtgctgcagctggcggtg
caggcctgcgtggactgcgctcgccacccgccacacgtgctggccaggctacccaacggg
gacggcgacaccatcgtcactgcccggtacgacggcgaggtgcgctcgctgcggctgccg
tcggtgcggagcgcctccttcgtgctgcgcttcctggagaagctctgccactcgctggag
tgcgacaacctcctgagcagccagccggcttgcctcgccagcagcaacgtactgccaggt
cgtgacgacgttgacctggcccgggggatcaagcgtccgtcacaggagccgttcaactcc
ccgctctccccaaagcggcctcggccactccaacacctgccttccgaaggagagcctcgc
gtggccgagggcctcacgggcgacagcctgcagaggccctcgctggagacgcaagactcg
gccctcaacgcgctcgccgtgctgcaggccccgcggcggcgccccgcccctccctcctcc
ctcgacgtccctcgcctcctgcagaggcagttccctccacggcaccaccaccaccaccac
ctgcagcagcagctccaccgtcagcagcagcagcagcaccgtcatcagcaccatcaacag
caccggcagcagcagctgcacctggcgacgcggaggcgagaggaggggttcctcctgcgg
gatggaggcaagctgaaccggcaagcttcgtccggatcaggctcgggaggacagtttgaa
ggcggccgtggcagcccatgctcgccctcccagaatgcagcggggcgacgctcctcttcc
tcctcgagcaccagcggcacccgcagactctcactgctggtggcggccggcgccgacgcg
gaggggacgagccgcgacccatcggggtggagcgtggacgacgtcatgagcttcatccgc
actgccgaccccacggcgctcgccccccacgcggagctcttccgcaagcacgagattgat
ggccgggctctgctgctgctcaagagcgagatgatgatgaagtacatgggcctcaagctg
ggcccggcgctcaagctggcctaccacatcgaccgcttgcggcagggcaagcgctga
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