Lethenteron reissneri (Far Eastern brook lamprey): 133357018
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Entry
133357018 CDS
T09663
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04517
IgSF CAM signaling
lrj04520
Adherens junction
lrj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133357018
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133357018
04530 Tight junction
133357018
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133357018
NCBI-ProteinID:
XP_061430743
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All DBs
Position
56:complement(3102830..3188883)
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AA seq
1145 aa
AA seq
DB search
MAVCDWRRFCCCVCAVVVTQGSLQHQVPKVLTVTLKKQHGLGLSIVAAKGAGLDKLGIYV
KSVVKGGAADQDGRLAAGDQLLSVDGNSLVGLSQERAAELMTRTGSVVTLEIAKQGAIYH
GLATLLNEPSPTTQHRGTDRRTGGKARPKSEGLELYRGAARPDSPEEPAETHTDAHQQQQ
QQEQQGGAVSHGDDRLVKNRADHRSTPNVAHSPDSVGLRPVYPGAPASRVQSVSTGNLKA
EESPSPPSLEAYPVPTATYARECSTLPPPPADSSPAWAASGMQRAAHSEEELRRDRPYRA
AGPPPPPPHHHHGQQQAQRQQPPSSLLSSSSHEQSALSARAPQYGIAVGGAASAKTGPGR
WKTPVVSGGGGGGGGQQGGGLPPPPPPTRYPPGYGPESRDLPPPPPPPPPASALHGMGGM
SGGGTSSSLSSLSSPSLPSPGYGGDAGPEAERKREEQLRWYEAEKARLEEERERQRRRKA
AGAAAPGGGGGGGAGAGSVVRPHERPAVPSQGDTIIRELRPQSQPRTIERHDLHFLVPPP
AGTGEEESASGSPQLSPSPWARDARERQEKQRQQQQLEMLEREIAALQSRPQHQLLPEES
DRLRKLLLEREFQRRVQEVSLRRRGGDDDDDDDDDYEERDDDEGGGGTRIGAQAAGQKQS
VQEKPLPWQHQQTGDFHQQQQQRHEEETHVLQAFPTLSVLHLLQDEERRKHQQQAEERAR
QQREADERARQQREAEERARQQREAEERARQQRDAEERARQQREAEERARQQRDAEERAR
QQREAEERARQQREAEERARQREADERAKQQREAEERTRQQREAEERTRQQREAEERTRK
VEEQRRRDDDYYAHMESERRRALDEEERRLLGPGNNNGGGGDDGTSTAAYAATTAAASPP
APSQQSKPRGGGGTGIGGGIGGGIGGIGGGGDVVHRAMLVRCGDGEEEEDSAKTRDARTN
PAAAAAAAPLRWQQQQPGGGGGAVTTRRPPLARPPRPVSDGFALSSAAGGAAGLGRQAPS
VAASSSMADLARVGRGAVGAAAAQQLRGTPASLLLTYASPGNSQGMNTYRPGGTPGVIGS
QEVYRDPRERRTNQSKPEAGERPSPMPEKLPFRERQRLFSQGQDVANKIKTSRKLMELEQ
ELGNK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgtgattggcggcgcttttgctgttgcgtttgtgcggttgtggtgacgcag
ggctcgctgcaacaccaggtgcccaaggtgctcaccgtcacgctcaagaagcagcacggt
ctgggcctcagcatcgtcgccgccaagggtgccggtttggacaagctgggaatctacgtc
aagtcggtggtcaaaggcggcgctgctgatcaggacgggcgtttggctgctggggaccag
ctgctcagcgtcgatgggaacagcctcgtgggcctttctcaagagagggcggccgagctg
atgacccgcaccggctcggtggtgacgctggagatcgccaagcagggagccatctaccac
ggcctagccaccctgctcaacgagccctcgcccaccacgcagcacagaggaacggaccgt
cgcaccggtggcaaggcgaggcccaagagcgaggggctggagttgtaccgcggcgcggcg
cgtcccgacagcccggaagagccggcagagacccacaccgacgcccaccagcagcagcag
cagcaggagcagcagggcggcgcagtctctcacggcgacgaccggctcgtgaagaaccgc
gcagaccaccgctctacccccaacgtcgcgcactcccccgacagcgtgggtctccgcccc
gtgtacccgggcgctccggcctccagggtccagtcggtgtcgaccggcaacctcaaggca
gaggagagtccctctccgccgtcgctcgaggcctacccggtgcccacagccacctacgca
cgcgagtgcagcacgctgccacccccgcccgcagacagctcccccgcttgggcggcctcc
ggcatgcagagagcggcgcactccgaggaggagctgcggcgagaccgcccctaccgtgcg
gcggggccgccgccgccaccgccacaccaccaccacgggcagcagcaagcgcagcgccag
cagccgccctcctcgctcctatcctcctccagccacgagcagtcggcgctgtcggctcgc
gcgccgcagtacggcatcgccgtgggcggcgccgcctccgccaagacggggccgggccgc
tggaagacgcccgtcgtcagcggtggcggcggcggcggcggtggccagcaaggaggcggc
ctccctccgccgccccctccgacgcggtacccgccggggtacggccccgagtcgcgggac
ctcccgccgccaccgccgcctccgccgccggcgtccgccctgcacggcatgggcgggatg
agcggcgggggcacgtcctcgtcgctgtcgtcgctttcgtcgccgtcgctgccgtcgccc
ggctatggcggcgacgcggggcccgaggcggagcgcaagcgcgaggagcagctgcgctgg
tacgaggcggagaaggcgcggctggaggaggagcgcgagcgacagcggcgcaggaaagcg
gcgggggccgctgctcccggcggcggtggcggtggtggcgcgggcgcggggtcggtggtg
agaccgcacgaaaggccggcggtgccgtcgcaaggagacacgatcatcagggagctgcgc
ccccagtcgcagccgcgcaccatcgagcgccacgacctgcacttcctggtgccccccccc
gcgggcaccggcgaggaggagagcgccagcggctccccgcagctgtcgccgtcgccgtgg
gcgcgcgacgcccgcgagcgccaggagaagcagcggcagcagcagcagctggagatgctg
gagcgggagatcgcggcgctgcagtcgcggccgcagcaccagctgctgcccgaggagagc
gaccggctgcgcaagctgctgctggagcgcgagtttcagcggcgcgtgcaggaggtgtcg
ctgcgccggcggggcggcgacgacgacgatgacgacgacgacgactacgaagagagggac
gacgacgagggaggtggaggcactaggatcggggcgcaggccgcagggcagaagcagtcg
gtgcaggaaaagcctctgccgtggcaacaccagcagacgggagacttccaccagcagcag
cagcaaaggcatgaggaggagacgcacgtgttgcaggccttcccgactctctcggtcttg
cacttgctccaggacgaggagcgccggaagcatcagcagcaggcggaggagcgtgcgcgg
cagcagagggaagcggatgagcgggcaaggcagcagcgagaagcggaggagcgagcgagg
cagcagcgagaagcggaggagcgagcgaggcagcagcgagacgcggaggagcgagcgagg
cagcagcgagaagcggaggagcgggcgaggcagcagcgagacgcggaggagcgggcgagg
cagcagcgagaagcggaggagcgagcgaggcagcagcgagaagccgaggagcgagctcga
cagagggaagcagacgaacgggcgaagcagcagcgggaagcagaggagcggacgcggcag
cagcgggaagcggaggagcggacgcggcagcagcgagaagcggaggagcggacgcgcaag
gtggaggagcagcggcgccgcgacgacgactactacgctcacatggagtcggagcggcgg
cgcgcgctggacgaggaggagcgccgcctgctgggtcccggcaacaacaacggcggcggc
ggcgacgacgggacatccacggcggcctacgccgccaccaccgccgccgcgtctccgccg
gcgccgtcccagcagagtaagcctcgcggcggaggcggaacgggcatcggcggcggcatc
ggcggaggcatcggcggcatcggcggaggcggcgacgtcgtgcacagagccatgctggtg
cggtgcggtgacggcgaggaggaggaggactctgcaaagacgagagacgctcgcactaac
cccgcggcggcggcggcggccgcccccctgcgctggcagcagcagcagccgggcggcggc
ggcggcgccgtgacgacgcgccgaccgccgctcgcccggccgccgcgccccgtgtcggac
ggctttgcgctctcgtcggccgcggggggggcggccggcctgggcaggcaggcgccgtcg
gtggcggcttccagcagcatggccgacctggcgcgcgtcggccgcggcgctgtcggcgcc
gcggcggcccagcagctccgcggcacgccggcctcgctgctgctcacctatgcttcgcct
ggaaactcgcaaggcatgaacacgtaccggcccggcgggacgcccggcgtcatcggctcc
caggaggtttaccgcgacccacgcgagcgtcgcaccaatcagagcaaaccagaggcgggc
gagcgcccgagcccgatgcccgagaagctgccgttccgtgagcgccagcgcctcttctcg
cagggccaggacgtcgccaacaagatcaagacgtcgcgcaagctcatggagctcgagcag
gagctgggaaacaaataa
DBGET
integrated database retrieval system
