Lethenteron reissneri (Far Eastern brook lamprey): 133357035
Help
Entry
133357035 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133357035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133357035
Membrane trafficking [BR:
lrj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
133357035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
Motif
Other DBs
NCBI-GeneID:
133357035
NCBI-ProteinID:
XP_061430759
LinkDB
All DBs
Position
56:7543695..7555560
Genome browser
AA seq
729 aa
AA seq
DB search
MNIELFPREQEEEEDETEGSGGTTAPSNVRDVGGCVASAPVRWGDGVRGAALAPPYLLAL
GAQLLTVHSLLDQQLKQSIPFTGGHCLDSLEGKLLACAGGQLFALEPCSLECQVGDLLAG
GRVDQALELARASRHTMPRDRYASLYERVKQQAGFVELALGRLPEATELFRSGRLDVREL
ASLVPDLLPPSSSFSRTHPPLHPHADLTTLTGGRPHLAASVRRFLASRLAEARSAGPPDS
RAVVLIGGGGGALPSPPPPGPPGWREDVDTALVKLYAEEGDERLFDLLAGGDCAAHLQDS
AAHLERLGRYFALGLLYHHHQQDDVALQYWVRVVDGELSDASRPDLFSFVVDFLSYCPSA
KLVWRHSAWALQRSEETGVHIFTKRPWREEGEARGSEELCPDEVVRFLGQFPRALMAFLE
HLVLERRVQEERHHTHLATLYLEDVLDILCNHQPDDHGGSPGFTAGSQGAKLAAARAKLQ
LMLQESELYRAEFLLGKLGASPLLAERALLQGRLGDHGGALHTLVHGAHDLPAARRYCSR
HPDPAQRRRLFHLLLSACLVPPTGPCQSNGPERGAARNGTGAGPDDDGAYDGHDGARRAV
ETDAVAVADLLNGEAPEFEASAVLATLPEGWSAGLLAPFLRAALRGSLHARRTAQAQRGL
ACAQNLALRKEKASLCLRPVVLTERTICPMCQGVFSEPEFARYPSGAVVHPACARQRSVC
PITGHVYSP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgagctgttcccgagggagcaagaggaggaggaggatgagacggaggggtcg
gggggaaccaccgccccatcgaatgttcgtgacgtcggagggtgtgtcgcgtcggccccg
gtccgctggggtgatggcgtgcgcggcgccgcgctggcaccgccgtacctgctggcgctg
ggggcccagctcctcaccgtgcacagcctcctggaccagcagctcaagcagagcatcccc
ttcacgggcgggcactgcctcgacagcctggaggggaagctgctggcgtgcgcgggcggc
cagctcttcgcgctggagccgtgctcgctcgagtgccaagtgggggacctgctggcggga
ggccgcgtcgaccaggcgctggagctggcgagggcgtcgcgtcacacgatgccccgcgac
cgctacgcgtcgctgtacgagcgcgtgaagcagcaggcgggctttgtggagttggcgttg
ggccgcctccctgaagccacggagcttttcaggagcggccgcctggacgtgcgcgagctc
gcctcgctggtgcccgacctcctgccgccctcctcctccttctcgcgcacgcaccccccg
ctgcacccacacgccgacctcaccacgctcaccgggggacgcccccacctcgccgcctcc
gtccgccgcttcctcgcctcccgcctggcggaggcgcgctccgcggggccccccgactcg
cgcgctgtcgtgctcatcggcggcggcgggggggctctccccagcccccccccgcccggc
ccgccgggctggcgggaggacgtggacacggcgctggtgaagctgtacgccgaggagggg
gacgagcggctcttcgacctgctggcgggcggcgactgcgccgctcacttgcaagactct
gccgctcacctggagcgcctcggcaggtattttgcactcggtctgctctaccaccaccat
cagcaggacgacgtggcactgcagtactgggtgcgagtggttgacggggagctgagcgac
gcatcgcggcccgacctcttctcattcgtcgtcgacttcctgagctactgcccgagcgcc
aagctggtgtggaggcactccgcctgggccctgcagcgcagcgaggagacaggagtccac
atcttcaccaagcggccgtggcgagaggagggggaggcgcgggggagcgaggagctgtgc
cccgacgaggtggtgcggttcctgggccagttcccgcgtgccctgatggccttcctagaa
cacctggtgctggagaggcgggtgcaggaggagaggcatcacacgcacctcgccacactc
tacttggaggacgtcctcgacattctgtgcaaccatcagcctgacgaccacggggggtca
ccgggtttcacggcggggtcacagggcgccaagctggccgcggcacgggccaagctgcag
ctcatgctgcaggagtcggagctctaccgtgcggagttcctgctcgggaagctgggtgcc
tctccgctgctggccgagcgggccttgctgcagggccgtctgggcgaccacggcggcgcc
ctgcacactctggtgcacggcgcgcacgacctccccgcggcgcgccgctactgctcccgc
cacccggacccggcccagcgccgccgcctcttccacctcctcctctccgcctgcctggtg
ccgccgaccgggccctgccagtccaacgggccggagcgcggcgccgcccgcaacgggacg
ggcgcggggcccgacgacgacggcgcctacgacgggcacgacggcgctcgccgtgccgtc
gagaccgacgccgtggccgtggcggacctgctgaacggcgaggcccccgagttcgaggcg
tccgccgtgctggcgacgctgcccgaaggctggtcggcggggctgctggcgccgttcctg
cgcgcggcgctgcggggcagcctgcacgcgcggcgcaccgcgcaggcgcagcgcgggctg
gcgtgcgcacagaacctcgcgctgcgcaaggagaaggcctctctgtgcctgcggcccgtg
gtgctcacggagcgtaccatctgccccatgtgccagggggtgttctccgaacccgagttt
gcgcgctaccccagcggtgcggtggtgcacccggcgtgcgcccgccagcgctcggtgtgc
cccatcacgggccacgtgtactcgccgtga
DBGET
integrated database retrieval system
