Lethenteron reissneri (Far Eastern brook lamprey): 133357043
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Entry
133357043 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133357043
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133357043
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
133357043
NCBI-ProteinID:
XP_061430767
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Position
56:10353178..10360231
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AA seq
597 aa
AA seq
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MMLLLLLAPPTPVSSPEQHARSWRNIVSRKVRFPIALQAAIRDGNVARVYDILGAAESXE
GGSRRSGGPPNPRQADEQEDRSWREALNLAIRMGSDEVLGALLRCVRFDFRQIHEALLVA
VDTNQQQVVTLLLDRLDNDKALGHNKMDIRSFSLAIFDHSMDSSRYPPGVTPLTLASQDN
LFDIVEVLLKKGHAIQRPHNISCSCLECQNGRQYDTLKFSLSRINTYRGLAGRPYLCLAS
GDAILGAFELSRELXRLARQEPEFKAEYMELDRQCEEFAVELLAMCQNQREVDSLLNDAP
PHGDEELAHGAFEEGIPSLGRLRLAVSHQQKLFVSHPVCQQVLTSIWCSGMPSWRGSHAA
VKAGTCLGIFLGMPLLAIIYWIAPKSRLGNLLRTPLLKFLMHSASYLWFLFFLLVESIMM
DSSSDIVSTRNQLSWXSSFHMVWVAGFLWYECKEVWIEGLRVYLSDWWNCLDLAMISMYI
SSFTLRLLVRWSGELACGRDPLSAECAYFTTAERGQWQKDDPQIIAEVVFAITSALSFTR
LAFILPAHESLGTLQISIGKILGDIFRFMFLVMIIGTAFLCGINNLYVHYTFNKLGR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctgctgctgcttgcgccaccgacccccgtgtcgtcgccggagcagcacgcg
cgcagctggcgcaacatcgtgagcaggaaggttcgcttccccatcgccctgcaagcggcc
atccgcgacgggaacgtggcgcgcgtctacgacatcctgggggccgccgagagcnnggag
ggggggtcgcggcggagcggggggccaccgaacccgcggcaggcggacgagcaggaggac
cgctcgtggagggaggcgctgaacctggcgatccgcatgggcagcgacgaggtgctgggc
gctctgctgcgctgcgtgcgcttcgacttccggcagatccacgaggccctcctcgtcgcc
gtggacaccaaccagcagcaggtcgtgaccctgctgctcgaccgcctggacaacgacaag
gcgctgggccacaacaagatggacatccgctccttctcgctcgccatcttcgaccactcg
atggacagctcgcgctacccgcccggcgtcacgccgctcacgctcgcctcgcaggacaac
ctcttcgacatcgtcgaggtgctgctcaagaaggggcacgccatccagcgcccgcacaac
atctcctgcagctgcctcgagtgccagaacgggcggcagtacgacacgctcaagttctcg
ctgtcgcgcatcaacacgtaccgcggcctcgccgggcggccgtacctgtgcctcgcgagc
ggcgacgccatcctcggcgccttcgagttgagccgcgagctcncgcggctcgccaggcag
gagcccgagttcaaggcggagtacatggagctggaccggcagtgcgaggagttcgccgtg
gagctgctcgccatgtgtcagaaccagcgcgaggtggactcgctgctcaacgacgcgccc
ccgcacggcgacgaggagttggcgcacggcgccttcgaggagggcatccccagcctgggc
cgcctgcgcctcgccgtgtcgcaccaacagaagctgttcgtgtcgcacccggtgtgccag
caggtcctcacctccatctggtgctcgggcatgcccagctggaggggcagccacgccgca
gtcaaggcgggcacctgcctgggcatcttcctgggcatgccgctgctcgccatcatctac
tggatcgcgcccaagtccaggttggggaacctgctgcgcacgccgctgctcaagtttctc
atgcactcggcctcctacctctggttcctcttcttcctgctcgtcgagtccatcatgatg
gacagctccagcgacatcgtgtccacacgcaaccagctctcatggnacagctccttccac
atggtctgggtggcaggcttcctgtggtacgagtgcaaggaggtgtggatcgagggcctg
cgcgtgtacctgtcggactggtggaactgtctggacctggccatgatcagcatgtacatc
tcctccttcacgctgcgcctgctcgtgcgctggagcggggagctggcgtgcggccgggac
ccgctctcggccgagtgcgcgtacttcaccacggccgagcgcgggcagtggcaaaaagac
gacccccagatcatcgccgaggtggtgttcgccatcacgagcgcgctcagcttcacgcgc
ctcgccttcatcctccccgcgcacgagtcgctcggcacgctgcagatctccatcggcaag
atcctcggggatatcttccggttcatgttcctggtgatgatcatcggcacggcgttcctg
tgcggcatcaacaacctctacgtgcactacacgttcaacaagttgggccggtga
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