Lethenteron reissneri (Far Eastern brook lamprey): 133357110
Help
Entry
133357110 CDS
T09663
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133357110
Membrane trafficking [BR:
lrj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133357110
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
133357110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
EIF3I
Synaptobrevin
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
133357110
NCBI-ProteinID:
XP_061430875
LinkDB
All DBs
Position
56:complement(8925071..9129068)
Genome browser
AA seq
1328 aa
AA seq
DB search
MKRFTDNFRKVLDGLTTPGAPQSPSKPESEIAESLASEHFQVSKTVRHGFPHQPTALAFD
PVQKILAVGTHGGALRVFGRPGVDCFCQHENGVEVTQLMFMVNEGALISRCSDDSLHLWN
LRQKQPAVLHSLKFHKESIGCAHLPFQSKWLYIGTKKGNIHVVNVECFQLSGYVIMWNRA
IELSTKAHPGSIVHISDNPVDEGKLLIGYERGTVVLWDLKSKKADFRYYYEEEIHSVSWH
HEGKQFVCSHSDGSLTTWNVRSPARPTGLIVPHKKPFKEGRRVEVCGPILKVEHKTCRTA
EPFTIFSGGLVEGKAKRSSLSVMHGRNITVLEMDSNIVDFLTLCETPYPSDFQDPYAVVV
LLEKDMVVVDLTQSGYPIFENPYAMDIHDSPVTFCEYFADCSVEIIPALYSVGARQKKQG
FSKQEWPISGGSWDIGNQSYPEVIITGHADGSLKFWDASAITLQLLYKLRTAKIFERPVA
AGVAVRDGGKGGGGGSGGSGGSGVPSPAPAAVAVALDEPEDPFAVQLLAWCPESRMLCVA
GASSHVVFYRFSRQEAVGEIAVLEVRMQPEPEGAETPDPDAVISTVSSSLSSSSTTAVAA
ASGAATSSSTFPSSSLPPPPAPSGPGPGLPASSSQLPYPRGHPSSASTGSGDGAVPSLRV
KSEAVRQWPGYQAELVVQLVWADGETSQLPTSLEVSSAYGLVALGTCSGLVVVDVLQRSI
LLSLSCLDLYGSSDPYQRQPKSPRKSKQLAAGLADITEGIGAPDTERSRSPSSVVRSRRW
SFVYLTVKRHRKLSLPSDLKTSLVVLQKSYQNSKRDDVIDADQLNGVCTSPTTAQQSRSP
AKRFAPSEAPKAKSRGPVRPPFRKAMSAACMEVSAPAAPAAPANGEGASKSFHIGVGACT
PAATTATTHGGRRAMLQQLHSFSIFSHDDHQASGYAWNGRETRDNSLGQSRSSSVCSIDK
ESRESVTALRFSESFARKGDGSTCPCLWVGTSLGTVLSVGLSLPPSSEQRLSQPVIISPS
GTVTLLKGPVLRVDFLDCGGALARRPHEAWRDTNSNSDERDERGERARRRRPQSVTPSAS
AQELGAATQYVVACSEKQAKVVALPSHSCVYKHNITETSFVLRADAVAIGASACLASFCA
NGHIIIFSLPSLRPLLDVNFLPLADLRAARTFCFSNSGQALYLCSPTEIQRLTYSQEMCE
SLQDMLGELFIPVQTPEAPNKGFFKGLFGGNSPSLDREELFGETGSGRASRSLAQHIPGH
GSGSEGVKAAAGGVAAEMSRARVALDERGQRLGDLEDRTAAMLSGAENFSKHAHEMMLKT
KDKKWYQL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcttcacggacaatttccgcaaggtgctggacggcctcaccacgccgggagcc
ccgcagagccccagcaagcccgagagcgagatcgcggagagcctcgcctcggaacacttc
caagtatcaaagacggtgagacacggattcccacatcaacccacggcgctcgccttcgac
ccggtgcagaagatcctggcggtggggacacacggaggcgccttgcgagtgttcgggagg
cctggagtggactgcttctgccaacacgagaacggcgtggaggtgacacagctgatgttc
atggtgaacgagggcgctttgatcagcagatgctccgacgacagcctccacctgtggaac
ctgcggcagaagcagccggcggtgctgcactcgctcaagttccacaaggagagcatcggc
tgcgcccacctgccattccagagcaagtggctctacatcggcaccaagaagggcaacatc
cacgtggtgaacgtggagtgctttcagctctcgggctacgtcatcatgtggaacagagcc
atcgagttgtcgacgaaagcccaccccggctccatcgtgcacatcagcgacaaccccgtg
gacgaggggaagctgctgattggctacgagaggggaaccgtcgtgctctgggacttgaag
tccaagaaggctgattttcgatactattacgaagaggagatccactcggtgtcgtggcac
cacgaggggaagcagttcgtgtgcagccactcggacggcagcctcaccacgtggaacgtc
cgcagccccgccaggcccaccggcctcatcgtgccccacaaaaaacctttcaaagaaggc
aggagggtggaggtgtgtgggcccatcttgaaggtggaacacaagacctgccggactgcg
gagcccttcacgattttctccggcggcctggtggagggcaaggcgaagcggagcagcctc
tcagtgatgcatggcaggaacatcaccgtgctcgagatggactccaacatcgtcgacttc
ctcaccttgtgcgagacgccttaccccagcgatttccaagacccttacgcggtggtcgtg
ttgcttgaaaaggacatggtggtggttgacctcacgcaaagcggctacccaatctttgaa
aacccctacgcgatggacatccacgactcgcccgtcacgttctgcgagtattttgccgac
tgctcggtggaaatcatcccggcgctgtattctgtaggtgcccgccagaagaagcaaggc
ttcagcaaacaggagtggcccattagtggcggcagctgggacatcggaaaccagagctac
ccagaggtgatcatcacagggcacgcggatggctccctcaagttctgggatgcttccgcc
atcaccctgcagctgctatacaagctccgcacagccaagatttttgaacgacccgtggcg
gccggggtcgcagttcgggacggcggcaagggtggcggtggcggcagcggcggcagcggc
ggcagcggcgtgccgtcgcctgccccggcggcggtggcggtggcgctggacgagccggag
gacccattcgccgtccagctgctggcctggtgccccgagagccgcatgctgtgcgtcgcc
ggcgcgtcgtcacacgtcgtcttctaccgattcagccgtcaggaggccgtcggagagatc
gcggtgctggaggtgaggatgcagccggagccagagggagccgaaactcccgatcctgac
gcggtgatatcgaccgtctcctcctcgttgtcatcatcgtccacgactgctgtcgctgct
gcttcgggtgccgccacctcctcctccaccttcccttcctcatcgcttccgccccccccg
gcgccgtccggacccggcccgggcctcccggcgtcgtcatcgcagctgccgtacccacgc
gggcacccgtccagcgccagcaccggctcgggcgatggggcagtgccgtccctcagggtg
aagagcgaggctgtgcgccagtggccgggctaccaggcggagctggtcgtgcagctggtg
tgggccgacggggagacctcacagctgcccaccagcttggaggtcagctccgcctatggc
ctggtggcgctgggcacttgcagtggcctcgtggtggtggacgtcctgcagaggagcatt
cttctcagcctgagctgcctcgacctctacggctccagtgacccctaccagagacaaccc
aagtctccacgcaagagcaagcagctggctgctggcctggctgacatcacagagggcatc
ggggccccggacacagagaggagccgctcgccaagttcagtagtgcgatcacgaagatgg
agttttgtttatttaacagttaaaagacaccggaaattaagtctcccaagtgaccttaag
acaagcctagtagttctgcaaaagagctaccaaaacagcaaacgagatgacgtaattgac
gcagaccagctgaacggggtgtgcaccagtcccaccacggcccagcagtcgaggagcccc
gcgaagcgcttcgcccccagcgaagcgcccaaggccaagagccggggacccgtgagacct
ccgttccgcaaggcgatgtctgccgcctgcatggaggtcagcgcgcccgccgcgcccgcc
gcgcccgccaacggagaaggtgcctccaaatcattccacattggcgttggcgcctgcact
ccagctgccacgaccgccacgacgcatggaggcagacgagcaatgcttcagcaattacac
agcttcagtattttctcgcatgacgatcaccaggcctccggttacgcgtggaatggccga
gagacgcgtgacaactcgctgggccaatcgcgaagctccagcgtgtgcagcatcgacaag
gagtcgcgcgagtccgtgacggccctgcgcttctcggagagcttcgcgcgcaagggcgac
ggctccacgtgcccgtgcctctgggtcggcaccagcctgggcaccgtcctgtccgtgggc
ctcagcctgccgccatccagcgagcagcggctcagccagccggtcatcatctcgccgagc
ggcaccgtgacgctgctcaagggccccgtcctgcgcgtggacttcctcgactgcggcggg
gcgctggcgaggcggccgcacgaggcgtggcgcgacaccaactcgaacagcgacgagcgg
gacgagcggggcgagcgggcgcggcgccgcaggccccagtcggtgacgccgtcggcgtcg
gcgcaggagctgggagccgccacccaatacgtggtggcgtgctccgagaagcaggccaag
gtggtggcgcttccgtcgcacagctgcgtctacaagcacaacatcacggagacgtcgttc
gtgctgcgcgccgacgccgtcgccatcggcgccagcgcgtgccttgccagcttctgcgcc
aatggccacatcatcatcttcagcctccccagcctgcgtcccctgctggacgtgaacttc
ctgccgctcgccgacctgcgagcggctcgcacgttctgcttctccaacagcggccaggcc
ctgtacctgtgctcgcccacggagatccagcgactcacctacagccaggagatgtgcgag
agtttacaggacatgctgggggagctgttcatcccggtgcagaccccggaggctcccaac
aaaggcttcttcaaggggctcttcggcggaaacagcccctcgctcgacagggaagagctc
ttcggcgagaccggatcgggcagggcgtcgcgcagcctcgcgcagcacatcccgggccac
ggctccggctccgagggagtaaaggccgcggcgggcggagttgcggccgagatgtcgcgg
gcgcgcgtggcgctggacgagcgcgggcagcggctcggcgacctggaggaccgcacggcg
gcgatgctctccggcgcggagaacttcagcaagcacgcgcacgagatgatgctgaagacg
aaagacaagaagtggtaccaactgtga
DBGET
integrated database retrieval system
