Lethenteron reissneri (Far Eastern brook lamprey): 133357181
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Entry
133357181 CDS
T09663
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133357181
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133357181
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
DLP_helical
Motif
Other DBs
NCBI-GeneID:
133357181
NCBI-ProteinID:
XP_061430984
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All DBs
Position
57:complement(2126119..2140209)
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AA seq
1020 aa
AA seq
DB search
MENKRHARSWRNIVSRKVRFPIALQAAIRDGNVARVYDILGAAESGGGVAAERGVPPNPR
QADEQEDRSWREALNLAIRMGSDEVLGALLRCVRFDFRQIHEALLVAVDTNQQQVVTLLL
DRLDNDKALGHNKMDIRSFSLAIFDHSMDSSRYPPGVTPLTLASQDNLFDIVEVLLKKGH
AIQRPHNISCSCLECQNGRQYDTLKFSLSRINTYRGLAGRPYLCLASGDAILGAFELSRE
LTRLARQEPEFKAEYMELDRQCEEFAVELLAMCQNQREVDSLLNDAPPHGDEELAHGAFE
EGIPSLGRLRLAVSHQQKLFVSHPVCQQVLTSIWCSGMPSWRGSHAAVKAGTCLGIFLGM
PLLAIIYWIAPKSRLGNLLRTPLLKFLMHSASYLWFLFFLLVESIMMDSSSDIVSTRNQT
LMDSSFHMVWVAGFLWYECKEVWIEGLRVYLSDWWNCLDLAMISMYISSFTLRLLVRWSG
ELACGRDPLSAECAYFTTAERGQWQKDDPQIIAEVVFAITSALSFTRLAFILPAHESLGT
LQISIGKILGDIFRFMFLVMIIGTAFLCGINNLYVHYTFNKLGRFNETFQYLFWTVFGME
DRRTTDIPNFEIAQFVGRSLYGVYAIIMAIVLLNMLIAMITSSFERIEDDADVEWKFARS
RLYLSYFREGLTLPVPFNLIPSPKSVYYAIMRTAGLLFCRTSLGPSSPSVPSISEVIMNT
GVHDGWGLVEPRGARQSQVIRTLVRRYIDKARQEYEENKHKDLGFRVGELKKSVARMHGD
IKSIRRSLSRARLGLPEFAVSPGQARSDGDTASYLHATSDGESPCSSASASQRGSFRFVV
HEPDSPAQHRSGPAHDEARHPRPVHGGSDSQRPGPTHAPRALPSQQLGSRSPVSDSLRIG
ASEVPGAPRVGSPSAVGNRPMSVAERATPNAADDVHGLERRSSLFDGRSGGRNGSGDDTA
VAPAEGGGGGGVDEANAQCTHAYTARLDAAAGGTAGGTVGVATGVGRNRGAEEANDYTAL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaacggcacgcgcgcagctggcgcaacatcgtgagcaggaaggttcgcttc
cccatcgccctgcaagcggccatccgcgacgggaacgtggcgcgcgtctacgacatcctg
ggggccgccgagagcggagggggggtcgcggcggagcggggggtgccaccgaacccgcgg
caggcggacgagcaggaggaccgctcgtggagggaggcgctgaacctggcgatccgcatg
ggcagcgacgaggtgctgggcgctctgctgcgctgcgtgcgcttcgacttccggcagatc
cacgaggccctcctcgtcgccgtggacaccaaccagcagcaggtcgtgaccctgctgctc
gaccgcctggacaacgacaaggcgctgggccacaacaagatggacatccgctccttctcg
ctcgccatcttcgaccactcgatggacagctcgcgctacccgcccggcgtcacgccgctc
acgctcgcctcgcaggacaacctcttcgacatcgtcgaggtgctgctcaagaaggggcac
gccatccagcgcccgcacaacatctcctgcagctgcctcgagtgccagaacgggcggcag
tacgacacgctcaagttctcgctgtcgcgcatcaacacgtaccgcggcctcgccgggcgg
ccgtacctgtgcctcgcgagcggcgacgccatcctcggcgccttcgagttgagccgcgag
ctcacgcggctcgccaggcaggagcccgagttcaaggcggagtacatggagctggaccgg
cagtgcgaggagttcgccgtggagctgctcgccatgtgtcagaaccagcgcgaggtggac
tcgctgctcaacgacgcgcccccgcacggcgacgaggagttggcgcacggcgccttcgag
gagggcatccccagcctgggccgcctgcgcctcgccgtgtcgcaccaacagaagctgttc
gtgtcgcacccggtgtgccagcaggtcctcacctccatctggtgctcgggcatgcccagc
tggaggggcagccacgccgcagtcaaggcgggcacctgcctgggcatcttcctgggcatg
ccgctgctcgccatcatctactggatcgcgcccaagtccaggttggggaacctgctgcgc
acgccgctgctcaagtttctcatgcactcggcctcctacctctggttcctcttcttcctg
ctcgtcgagtccatcatgatggacagctccagcgacatcgtgtccacacgcaaccagacg
ctcatggacagctccttccacatggtctgggtggcaggcttcctgtggtacgagtgcaag
gaggtgtggatcgagggcctgcgcgtgtacctgtcggactggtggaactgtctggacctg
gccatgatcagcatgtacatctcctccttcacgctgcgcctgctcgtgcgctggagcggg
gagctggcgtgcggccgggacccgctctcggccgagtgcgcgtacttcaccacggccgag
cgcgggcagtggcaaaaagacgacccccagatcatcgccgaggtggtgttcgccatcacg
agcgcgctcagcttcacgcgcctcgccttcatcctccccgcgcacgagtcgctcggcacg
ctgcagatctccatcggcaagatcctcggggatatcttccggttcatgttcctggtgatg
atcatcggcacggcgttcctgtgcggcatcaacaacctctacgtgcactacacgttcaac
aagttgggccggttcaacgagacgttccagtacctcttctggacggtgttcggcatggag
gaccggcgcaccacggacatccccaacttcgagatcgcgcagttcgtgggccgcagcctc
tacggcgtctacgccatcatcatggccatcgtgctgctcaacatgctcatcgccatgatc
accagctccttcgagaggatcgaggacgatgcggacgtggagtggaagtttgcgcgctcg
cgcctctacctctcctacttccgagagggcctcaccctgcccgtgcccttcaacctcatc
cccagccccaagtctgtctactacgctatcatgcgaacggccgggctcttgttttgccgg
acgtcgctggggccatcctcaccgtctgtgcccagcatcagcgaagtcatcatgaacaca
ggtgtccacgacggctggggcctggtggagcccaggggcgcccggcagagccaggtgatc
aggacgctggttcggcgctacatcgacaaggcccggcaggagtacgaggagaacaagcac
aaagatctgggcttcagggtcggggagctcaagaagtcggtggcgcggatgcacggcgac
atcaagtcgatccgcaggagcctgagccgggcccggctcggcctgcccgagttcgcggtg
tcgcccgggcaggcacggagcgatggcgacaccgcctcttacctgcacgcgacctccgat
ggcgagtcgccctgctccagcgccagcgcatcgcaacgcggctctttccgcttcgtcgtc
cacgagccggactctccggcccagcatcgctcggggcctgcgcacgacgaggcccggcac
ccgcgacccgtgcacggcgggagcgactcgcagcggccgggccctacccacgcgccacgt
gcgctaccctcccaacaactggggtcccggtcgcccgtgagcgactccctacgaatcggt
gccagcgaggtgcccggcgcaccgcgggtgggcagtccgagcgccgtcgggaatcggccg
atgtctgtcgctgagcgggcgactccgaacgccgcggatgatgtccatggcctagagagg
aggtcgtcgctgtttgacgggcggtcgggcgggcggaatggctcgggggatgacacggcg
gtggctcccgcggaaggcggaggcggtggaggtgtcgatgaggcgaatgcccaatgcacc
cacgcttacactgctcgcctggatgcggccgcaggcggtacggcgggtggcaccgtgggg
gtggctacgggcgtagggcgaaaccgcggtgccgaggaggccaacgattacactgccttg
tga
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