Lethenteron reissneri (Far Eastern brook lamprey): 133357298
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Entry
133357298 CDS
T09663
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133357298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133357298
03036 Chromosome and associated proteins [BR:
lrj03036
]
133357298
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133357298
Coactivators
SAGA/TFTC/STAGA complex
133357298
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133357298
STAGA complex
133357298
TFTC complex
133357298
SAGA complex
133357298
SLIK complex
133357298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
133357298
NCBI-ProteinID:
XP_061431158
LinkDB
All DBs
Position
57:8737330..8767276
Genome browser
AA seq
751 aa
AA seq
DB search
MAEEKKSRVSGTLLPVESVKLIGESVGLAQMSEDACQLLAEEVGFRLKELSQEAAKFMRH
GKRKKLSTSDLDHALKIRNIEPLYGFQSAEFIPFRYASGGGRELFFYEEQEVNLSDMINT
PLPRVPLDISLKAHWLSIEGVQPSIPENPPPTPKEQQKKEATEPMRIMKPGQSDGNLKPG
HKASTSGTSDGKGKDKRKVPAEGAAVRVKARATHELSVEQQLYYKEITEACVGSCESKRA
EALQSIASDPGLYQMLPRFSTFISEGVRVNVAQNNLALLIYLMRMTKALLDNQTLYLEKY
LHELIPAVVTCIVSRQLCLRPDVDNHWALRDFAARLMAQICKNFSSTTNNIQSRSTKTFV
KSLHDDKTPWTTRYGCIAGLAELGFDVIKTLVIPRLPAEGDRIRQVLEGPVISNIDKIGA
QHVQTLLLKHCAPVLVKLRPGPDSAEAYKADYGHLGPLLCTHVTKARVQVSSSSSSSSQG
LQLNRSTLTFTHPQVRGAIGAPHSLASPQTALPPRSSTIIKVPGSGGGLYSTSLQGASDA
SGLPPKFIVVSAPTGPTQILPMSSSTSSPSSISSPATASSLSSSLSATMATAGGTPTVVK
LLAPSQKLAPGITVSVMPSSSSSSSSPSSSSLDVTGKPVTPAPAGASSSLGVAARGGAGG
SVPQLIAVKQEGVDGQPMVVLRKPGAPGPAAGAAAGGATSNAVTVTVAGVTAAAGGGVGG
AVGGVGTALGTAPGGTGSAVPKSEPGTTGSA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagaagtcgcgcgtgagcggcacgctgctgcccgtcgagtcggtgaag
ctcatcggcgagtccgtgggactcgcgcagatgtcggaggacgcatgtcagctgctcgca
gaggaggttggcttccgactcaaggagctgtcgcaggaggcggccaaattcatgcgccat
ggcaagcggaaaaaactgagcacatccgacctcgaccacgccctgaagatacgcaacatt
gagcccctgtacgggttccagtcggccgagttcatcccgttccgctacgcgagcggagga
gggcgggagctgttcttctacgaggagcaggaagtgaacctgagcgacatgatcaacacg
ccgctcccgcgcgtgccactcgacatcagcctcaaggctcactggctgagcattgagggt
gttcagccgtccattccggagaacccgcctcccacgccaaaggagcagcagaagaaggag
gcgacggagcccatgaggatcatgaagcccggacagagcgacgggaacctcaagcctggg
cacaaggcctccacgagcgggacctccgacggcaagggcaaggacaagaggaaggtgcct
gcggagggcgccgccgtgcgcgtgaaagcgcgtgccacgcacgagctctccgtggagcag
cagctctactacaaggagatcacggaggcctgcgtcggctcctgcgagtccaagcgagcg
gaagcactgcagagcatcgcgagcgacccggggctgtaccagatgctgccacgtttcagc
accttcatctctgagggagtgcgcgttaacgtcgctcagaacaacctggctctgctcatc
tacctcatgaggatgaccaaggccctgctggacaaccagacgctctacctggagaaatac
ctgcacgagctgatccccgcggtggtgacgtgcatcgtgagccgccagctctgcctgcgc
cccgacgtggacaaccactgggccctgcgcgactttgccgcccgcctcatggcgcagatc
tgcaagaacttcagctccacgacgaacaacatccagtcccgctcgaccaagaccttcgtg
aagagtctgcacgacgacaagacgccgtggaccacacgctacggctgcatcgcgggcctg
gccgagctcggcttcgacgtgatcaagacgctcgtcatcccgcgtctccccgccgagggt
gaccgcatccggcaggtgctggagggcccggtgatcagcaacatcgacaagatcggggcg
cagcacgtgcagacgctgctgctgaagcactgcgcgccggtgctggtgaagctgcgtccg
ggccccgacagcgccgaggcctacaaggcggactatgggcacctgggccccctgctgtgc
acccacgtcaccaaggcccgcgtgcaggtcagctcctcctcctcctcctcctctcagggc
ctgcagctcaaccgctccacgctcaccttcactcacccgcaggtgcgtggcgccatcggt
gcccctcactctctcgcgagcccccagacggcgctgcccccccgctcctccaccatcatc
aaggtgccaggctcagggggggggctctattccacgtccctgcagggggccagcgacgcg
tctgggctgccccccaagttcatcgtcgtgtcggcccccaccggccccacacagatcctg
ccgatgtcctcctccacctcgtcgccctcctccatctcgtcacccgccaccgcctcctcg
ctgtcctcgtccctgtcggccacgatggcgacggccggcggcacgcccaccgtggtgaag
ctgctcgcgcccagccagaagctggcgccgggcatcaccgtctcggtgatgccctcctcc
tcctcgtcctcctcgtcgccctcctcctcgtcgctcgacgtgaccggcaagccggtgacg
ccggcgccggcgggggcgtcgtcctcgctgggcgtcgcggcgaggggcggtgccggcggc
agcgtgccgcagctcatcgccgtcaagcaggagggcgtcgacggccagcccatggtggtg
ctgcgcaagccgggtgcgccgggaccggcagcaggagcagcagcaggaggagccacgagc
aacgccgtgacggtgacggtggcgggggtgacggccgctgccggcggtggcgttggcggt
gccgttggcggtgtcggcacggctttggggacggcgcctggtgggacgggctcagcggtg
cccaaatcggagcccgggaccacgggctcggcttag
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