Lethenteron reissneri (Far Eastern brook lamprey): 133357299
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Entry
133357299 CDS
T09663
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133357299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133357299
03036 Chromosome and associated proteins [BR:
lrj03036
]
133357299
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133357299
Coactivators
SAGA/TFTC/STAGA complex
133357299
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133357299
STAGA complex
133357299
TFTC complex
133357299
SAGA complex
133357299
SLIK complex
133357299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
133357299
NCBI-ProteinID:
XP_061431160
LinkDB
All DBs
Position
57:8903317..8935190
Genome browser
AA seq
750 aa
AA seq
DB search
MAEEKKSRVSGTLLPVESVKLIGESVGLAQMSEDACQLLAEEVGFRLKELSQEAAKFMRH
GKRKKLSTSDLDHALKIRNIEPLYGFQSAEFIPFRYASGGGRELFFYEEQEVNLSDMINT
PLPRVPLDISLKAHWLSIEGVQPSIPENPPPTPKEQQKKEATEPMRIMKPGQSDGNLKPG
HKASTSGTSDGKGKDKRKVPAEGAAVRVKARATHELSVEQQLYYKEITEACVGSCESKRA
EALQSIASDPGLYQMLPRFSTFISEGVRVNVAQNNLALLIYLMRMTKALLDNQTLYLEKY
LHELIPAVVTCIVSRQLCLRPDVDNHWALRDFAARLMAQICKNFSSTTNNIQSRSTKTFV
KSLHDDKTPWTTRYGCIAGLAELGFDVIKTLVIPRLPAEGDRIRQVLEGPVISNIDKIGA
QHVQTLLLKHCAPVLVKLRPGPDSAEAYKADYGHLGPLLCTHVTKARVQVSSSSSSITAQ
GLQLNRSTLTFTHPQVRGAIGAPHSLASPQTALPPRSSTIIKVPGSGGGLYSTSLQGGSD
ASGLPPKFIVVSAPTGPTQILPMSSSTSSPSTSSPATASSLSSSLSATMATAGGTPTVVK
LLAPSQKLAPGITVSVMPSSSSSSSSPSSSSLDVTGKPVTPAPAGASSSLGVAARGGAGS
VPQLIAVKQEGVDGQPMVVLRKPGAPGPAAGAAAGGATSNAVTVTVAGVTAAAGGGVGGA
VGGVGTALGTAPGGTGSAVPKSEPGTTGSA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaagaagtcgcgcgtgagcggcacgctgctgcccgtcgagtcggtgaag
ctcatcggcgagtccgtgggactcgcgcagatgtcggaggacgcgtgtcagctgctcgca
gaggaggttggcttccgactcaaggagctgtcgcaggaagcggccaaattcatgcgccat
ggcaagcggaaaaaactgagcacatccgacctcgaccacgccctgaagatacgcaacatt
gagcccctgtacgggttccagtcggccgagttcatcccgttccgctacgcgagcggagga
gggcgggagctgttcttctacgaggagcaggaagtgaacctgagcgacatgatcaacacg
ccgctcccgcgcgtgccactcgacatcagcctcaaggctcactggctgagcattgagggt
gttcagccgtccattccggagaacccgcctcccacgccaaaggagcagcagaagaaggag
gcgacggagcccatgaggatcatgaagcccggacagagcgacgggaacctcaagcctgga
cacaaggcctccacgagcgggacctccgacggcaagggcaaggacaagaggaaggtgcct
gcggagggcgccgccgtgcgcgtgaaagcgcgtgccacgcacgagctctccgtggagcag
cagctctactacaaggagatcacggaggcctgcgtcggctcctgcgagtccaagcgagcg
gaagcactgcagagcatcgcgagcgacccggggctgtaccagatgctgccacgtttcagc
accttcatctccgagggagtgcgcgttaacgtcgctcagaacaacctggctctgctcatc
tacctcatgaggatgaccaaggcactgctggacaaccagacgctctacctggagaaatac
ctgcacgagctgatccccgcggtggtgacgtgcatcgtgagccgccagctctgcctgcgc
cccgacgtggacaaccactgggccctgcgcgactttgccgcccgcctcatggcgcagatc
tgcaagaacttcagctccacgacaaacaacatccagtcccgctcgaccaagaccttcgtg
aagagtctgcacgacgacaagacgccgtggacgacgcgctacggctgcatcgcgggcctg
gccgagctcggcttcgacgtgatcaagacgctcgtcatcccgcgtctccccgccgagggt
gaccgcatccggcaggtgctggagggcccggtgatcagcaacatcgacaagatcggggcg
cagcacgtgcagacgctgctgctgaagcactgcgcgccggtgctggtcaagctgcgtccg
ggccccgacagcgccgaggcctacaaggcggactatgggcacctgggccccctgctgtgc
acccacgtcaccaaggctcgcgtgcaggtcagctcctcctcctcctcaatcaccgctcag
ggcctgcagctcaaccgctccacgctcaccttcactcacccacaggtgcgtggtgccatc
ggtgcccctcactctctcgcgagcccccagacggcgctgcccccccgctcctccaccatc
atcaaggtgccaggctcagggggggggctctattccacgtccctgcaggggggcagcgac
gcgtctgggctgccccccaagttcatcgtcgtgtcggcccccaccggccccacacagatc
ctgccgatgtcctcctccacctcgtcgccctccacctcgtcacccgccaccgcctcctcg
ctgtcctcgtccctgtcggccacgatggcgacggccggcggcacgcccaccgtggtgaag
ctgctcgcgcccagccagaagctggcgccgggcatcaccgtctcggtgatgccctcctcc
tcctcgtcctcctcgtcgccctcctcctcgtcgctcgacgtgaccggcaagccggtgacg
ccggcgccggcgggggcgtcgtcctcgctgggcgtcgcggcgaggggcggtgccggcagc
gtgccgcagctcatcgccgtcaagcaggagggcgtcgacggccagcccatggtggtgctg
cgcaagccgggtgcgccgggaccggcagcaggagcagcagcaggaggagccacgagcaac
gccgtgacggtgacggtggcgggggtgacggccgctgccggcggtggcgttggcggtgcc
gttggcggtgtcggcacggctttggggacggcgcctggtgggacgggctcagcggtgccc
aaatcggagcccgggaccacgggctcggcttag
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integrated database retrieval system
