Lethenteron reissneri (Far Eastern brook lamprey): 133357341
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Entry
133357341 CDS
T09663
Name
(RefSeq) autophagy-related protein 16-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04136
Autophagy - other
lrj04140
Autophagy - animal
lrj04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133357341
04136 Autophagy - other
133357341
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133357341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133357341
03029 Mitochondrial biogenesis [BR:
lrj03029
]
133357341
Membrane trafficking [BR:
lrj04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
133357341
Others
Rab GTPases of specific organelles
Auto phagosome
133357341
Mitochondrial biogenesis [BR:
lrj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133357341
BRITE hierarchy
Motif
Pfam:
WD40
ATG16
ANAPC4_WD40
eIF2A
NBCH_WD40
DMPK_coil
Laminin_II
FPP
Crescentin
Baculo_PEP_C
FeoB_Cyto
COG3_N
TMF_DNA_bd
Bap31_Bap29_C
DUF2959
Fez1
Motif
Other DBs
NCBI-GeneID:
133357341
NCBI-ProteinID:
XP_061431224
LinkDB
All DBs
Position
57:complement(10160999..10209840)
Genome browser
AA seq
621 aa
AA seq
DB search
METEWRRSIARQLRQRDRGSRDAFGELIQRYTRLLEKADLQSLLSERLQKETHDGQGHAE
TSSSHDGASQGAEISALRMKHQEELTTLHKIRGELAQDVIELNHKLSAKEQQLQEMQTRL
AESEVRAGGLQAEVDRLCAELAELQAATQTVKDEYEALQMACTALESRLRRVEEDNRELV
ARWMAEKAIEADRVNTENEKDTRRRQEKLRKELAEAAQEHVNVDLDDDIEVLAEEATEGA
AAAGEQPAKLDRGTRPPVGSPSLPGGTPLPGLLDSLSNMFGVNVLHAYGAAPEHHANSKR
RASSVVSAGEGQVAPSSVCLAARLPERAICKFDAHDGEVNATRFSPNSRLLVTGGTDRKV
KLWDVIAGKTECRGTLSGSNAGITSLDFDNTGTYLLASSSDFASRIWTVDDFRLRHTLTG
HSGKVLSAKFMSDFVKIVSGSHDRTLKLWDLRSRACIRTIFAGSSCNDVVCSEQCVISGH
YDKKIRFWDTRSESVRTELELLGRVTSLDLNAERTELLSCSRDDSLRITELRTNSTRVSL
TAEGFKCGADWTRAVFSPDGQYVTAGSADGTLFVWNAATGHVERSLSRHHSAAVNAVAWS
PSGEYILSVDKAKRAVLWSDL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaatggaggagaagtatcgcgcggcagctgagacagcgagaccggggctcg
cgcgacgcgttcggggagctcatccagagatacacgcgcctgctggagaaggctgacttg
cagtctcttttgagcgagcgactgcagaaggagacgcatgacggacagggccacgcggag
accagcagtagccatgacggggcgtcacagggagcggagatttccgctctgcgcatgaag
caccaagaggagctaactacgctgcacaagatacgtggggagttggcgcaggatgtgatt
gagctgaaccacaagctctcggcaaaggagcagcagttgcaggagatgcagaccaggctg
gcagagagtgaggttcgggccggcgggctgcaggccgaggtggatcgcctgtgcgccgag
ttggccgagctgcaggcggcaacgcagacggtaaaggacgagtacgaggcgctgcagatg
gcttgcaccgcactcgagtcacgcctgcgccgcgttgaggaggacaaccgcgagctggtg
gcacgctggatggccgagaaagccatagaggccgaccgtgtcaacaccgagaatgagaag
gacacgcggcggcgccaggaaaagctgaggaaggagcttgcggaggctgcacaggagcac
gtcaacgttgacctagacgatgatatcgaggttttggctgaggaagcgacggagggggca
gcggcagcgggtgaacaaccagcgaaactcgacagaggcacgaggcctcccgtgggctcc
ccctccctccctggtggaactcccctccctggccttctcgactccctctccaacatgttt
ggtgtgaatgtcctgcatgcatatggagcggcacctgaacaccacgcaaacagcaagaga
agagcctcgtcagtggtgagcgccggcgagggtcaggtcgctccctcctccgtgtgtctc
gccgcccgcctgcccgagagggcaatctgcaagtttgacgcccacgacggtgaggtgaac
gccacgaggttcagccctaactcacggcttctggtgacaggcggcaccgaccgcaaagtg
aagctgtgggacgtgatagccggcaagacggagtgccgtggcacgctctccggcagcaac
gccggcatcaccagcctcgattttgacaacacgggcacctacctccttgcctcctccagt
gattttgcaagccgcatctggactgtggacgacttccgtctgcggcacacgttgactggt
cactcggggaaggtgcttagcgccaagttcatgagtgactttgtgaagattgtatcgggc
agccacgatcgcacgctcaagctgtgggacctgcgaagccgggcatgcattcgtacgatc
tttgcgggctccagctgtaacgacgtcgtgtgctcggagcagtgcgtcatcagcggccac
tacgacaagaagatccgcttctgggacacacgctcggagtctgtgcgcacggagctggag
ctgctggggcgcgtcacgtcgctggacctgaacgcagagcggacggagctgttgagctgc
tcgcgggacgactcgctccgtatcaccgagctgcgcaccaacagcacgcgcgtctctctc
acggcggagggcttcaagtgtggagcggactggacgagagctgtcttcagcccggatgga
cagtacgtgacggccggctcggctgacgggacgctgtttgtgtggaacgccgccacgggg
cacgtggagcgctctctctcccggcaccacagtgcggcagtgaatgcagtggcgtggagc
ccttcgggggagtacatcctgagcgtcgacaaggccaagcgcgccgtgctgtggtccgac
ttgtga
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