Lethenteron reissneri (Far Eastern brook lamprey): 133357460
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Entry
133357460 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecule (CAM) interaction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133357460
04514 Cell adhesion molecule (CAM) interaction
133357460
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133357460
09142 Cell motility
04820 Cytoskeleton in muscle cells
133357460
04810 Regulation of actin cytoskeleton
133357460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133357460
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin alpha subunits
133357460
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
LYRIC
Motif
Other DBs
NCBI-GeneID:
133357460
NCBI-ProteinID:
XP_061431392
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Position
7:10022836..10075825
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AA seq
1059 aa
AA seq
DB search
MAPGCSKDVIGVRLVTSLVHLMMVVQSTSAFNLDATRANVLSGPADSYFGYAVDFYLPAS
DSVSVVIGAPRANTTQPGVVEGGAVYNCPWAGDADCTTVKFDTKGDRMITLPTEAREKLE
YKSKQWFGASLRTHGSKVLACAPLYHWRTMKTNREKDPVGTCYLSSDNFNKFSEYSPCRT
SFGDPQGQGFCQGGFSVDFTKSGRVVLGGPGSFYWQGQLITAPSEAVMKDPTSESMVRSI
EGQKQTGSAPPSYDDSYLGYSVTVGEFTGDNQQDFVTGVPKGFRTLGYVGILDGENMTSL
HNFSGEQMASYFGFSVAVTDVNGDKLEDVLVGAPLFMDRGSDGKLREVGRVYLFLQERTL
SFREPQRFTGEEMYSRFGSALAPLGDVDQDGFNDVAVGIPFGGENRQGLVYIYNGDKDGL
KPVPSQVLESRWPGTSMPSSFGYALRGTVDVDKNGYPDLVVGAFGASKAIVYRARPVVTV
EAELQLEPQIINLESKDCKQAGSTSSFACFTVNYCVQVVGKGALSSTELNLELQLDRLKQ
KGTIKRALFALTQQSRYEQRITINKGAGPTCNKLTVHLRDETEFRDKLTPIAVSLNYTLM
EEATSASQGLRPIRNHFSPDHIQKQAHILLDCGSDNICVPSLKLSALSDRKQLYIGDENS
LVLTVNSRNDGEGAYEAELHVVLPPEADYVGVVRNNESLAKLTCAYKTENLTRSVVCDLG
NPMRGGTNLLVGLRFSVQRLEEAVSPIQFSLHIKSSNEKSPESNTETVVLPVGVFAQVNL
VGVSIPDQIVLPIINWEPVENPVKEEDIGPLVQHVYELRNIGPSRVGSAEMDLSWPLRSD
DDYILYVLALNTEGPIKCVPDSSNKINPLNLKLSNSHDTPGANETGNQQKENPRDIHRRE
LQSGEADSKSPRTLNCSTAECLHIRCTVQTLESGHNAVLQIKSRLWAKAFMEKESQQHTI
ESAAHFSVNDMPYKIRPEKLPSGAFQVSTIVAWANQDGNQPVPVWVIIVAVLAGLLLLSL
LVFAMWKMGFFKRVRPPQEDNGEEQQLHTEENGGDHADA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggctgctcgaaggatgtgatcggggtgcgtctggtcacctctctggtccac
ctgatgatggtcgtgcaatcgacgagcgccttcaatctggatgctactcgagccaatgtg
ctctcgggtccagctgacagctactttggctatgcggtggacttttacctgcccgcttct
gacagcgtgagtgtcgtcatcggagctcccagagcgaacaccacccagcccggagtggta
gaaggtggtgcagtctacaactgcccgtgggcaggagatgctgattgcacgacagtcaaa
ttcgacaccaaaggggaccgcatgatcacgctgcccacggaagcgagagaaaagttggag
tacaagtccaaacagtggtttggggccagcctacgaacccatggctccaaagttctggcc
tgtgctccactctaccattggagaaccatgaagaccaacagggagaaggaccctgtaggg
acctgctacttatcctcggacaacttcaacaaattttccgagtactctccctgccgcaca
agttttggagaccctcagggacaaggattctgccaagggggattcagtgtggacttcact
aagtctggtcgggtggtgctcggaggtcctgggagcttttactggcaagggcagctgatc
accgccccctcggaggcagtgatgaaggaccctacctcagaaagtatggtgcggagcatt
gaaggacagaagcaaaccggttctgcccctcccagctacgatgacagctacctcggctat
tctgtgaccgtgggagaatttaccggtgacaatcagcaagattttgtgactggtgtaccg
aaaggctttcggacacttggatacgttggaattttagacggtgaaaacatgacctccctg
cataacttttctggcgaacagatggcttcctacttcggattcagcgttgcggtcacagac
gtcaatggagacaagctggaagacgtgctggtgggagcgccgctcttcatggaccgcgga
tcggacgggaagctgcgtgaggtcggccgtgtctacctcttcctgcaggagcgaacactg
tccttccgcgagccgcagcgcttcacgggcgaagagatgtactcgcgttttggcagcgca
ctcgccccgctgggcgacgtcgaccaggacgggttcaatgatgtggcggtcgggatccct
tttggcggagagaaccggcagggtctcgtgtacatctacaacggcgacaaggatgggctg
aagccagttccttcgcaggtgctggagagccggtggccagggactagcatgccctccagc
ttcggttacgccttgcgcggcacagtcgatgtggacaaaaacggatacccagatcttgtt
gtgggtgcttttggcgcttccaaggctatagtgtacagggcacgtccggtggtaacagtg
gaagcagaacttcagctcgaaccacagatcattaatttggaaagcaaggactgcaaacag
gctgggagcacatcttccttcgcatgcttcacggtgaattactgcgtgcaagtcgtaggc
aaaggcgctctatcctccacggagcttaacctggagctgcagttggaccggctgaagcaa
aagggcaccatcaagagggctctcttcgccttgacgcagcagtcacgatatgagcagcgc
atcaccatcaacaaaggagcaggccccacttgcaacaagctcaccgtgcaccttcgtgac
gagacggagttccgggacaagctgacgcctatcgccgtgagcctcaactacacgctcatg
gaggaggcgacttcagcctctcaggggctgcggccaatccgcaaccacttcagccccgac
cacatccagaagcaggctcatatacttctggactgtgggtcagacaacatttgcgtgcca
tctctcaagctctcggctctgtcagaccggaagcagctgtacatcggcgacgagaactcc
ctggtgctcacggtgaactctcgcaacgacggggagggcgcctacgaggcggagctccac
gtggtcctgccacccgaggccgattacgtcggcgtcgtccggaataacgagtctcttgcc
aagctcacgtgtgcgtacaagacagaaaacctgacccgcagtgtggtgtgtgatctggga
aacccaatgagaggaggcaccaacctgctggttggactgagattcagcgttcagcgactg
gaggaggctgtctcgcccattcaattcagcctccatatcaagagctccaatgaaaagagc
ccagagagcaatacggagacggtcgtgctgccggtaggagtgttcgcacaagtgaatcta
gttggggtgtccattcccgatcagattgtgctccccattataaactgggagccagttgag
aaccctgtgaaggaagaggatattggaccattggtgcagcatgtttatgagctccgtaac
attgggcccagtcgcgtgggctctgcagagatggatctcagctggccgctgcgatccgac
gacgactacatcctctatgtcctggcgctgaacacggagggtcccattaagtgtgttccc
gactcatcgaacaagatcaatcctcttaacctcaagctgagtaactcgcacgatacgcca
ggcgcgaatgaaacgggcaaccaacagaaggagaacccccgcgatatccatcgccgggag
cttcaaagtggcgaagcggactcaaaatcccccaggactctgaactgcagcacggctgag
tgcttgcacatacgatgcacggtgcagacgttggagagcggccacaatgccgtgctacag
atcaagtcacgcctctgggccaaagccttcatggagaaggagagccagcagcacaccatc
gaatcggcggcacacttctccgtcaatgacatgccctacaagatccgtcccgagaagctc
cccagtggggcctttcaggtctccaccattgtcgcgtgggccaaccaggacggcaaccag
cccgtgcccgtatgggtcatcatcgtggctgtgctggcagggttgctcctcctctccctc
ctcgtcttcgccatgtggaagatgggattcttcaagcgtgtgcggccaccacaagaggat
aatggagaggagcaacagctgcacacggaagagaatggcggtgaccatgctgacgcatag
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