Lethenteron reissneri (Far Eastern brook lamprey): 133357882
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Entry
133357882 CDS
T09663
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133357882
03036 Chromosome and associated proteins [BR:
lrj03036
]
133357882
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133357882
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133357882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-met
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-C2HE
DUF3373
Motif
Other DBs
NCBI-GeneID:
133357882
NCBI-ProteinID:
XP_061432020
LinkDB
All DBs
Position
60:complement(6327728..6344901)
Genome browser
AA seq
1207 aa
AA seq
DB search
MASEEVAEATPSGEEELDGFTRLKEGGPPTQGTGLVDDDPTSNIPKKPDESEDGDLDQVP
LVSEVALAVKDGTESAGGTVVSEPADTNANATIMDSAEVISIEMSHMAPDMMVHVMIDGA
SEQIVNMAADVTAPVEATSVDSVADVTVADVTVEDVEMKDETLPFHAATDGAEVIEFMDT
AAVMDVVEVTEGTEAKESDDAFADAGSLRVLSVETMDTATSGIGEVTNVLETNFATAVAD
DSIASSAAQPKENDDSVQEISAEGGFTAYVGTAADADVATNEQGFTERDTGDETNSAEVD
AVVESVDVNELKAETSDTTDVIAVIVGTEMTNVADGSNTSNADTEVAATTSSGNGLIESL
EAGGVAGGATVVSVSGPEDVAFVTTISVASPLDVSTSVASVTDVTSAALRALQAVASQHV
GGGASASISEDTHIITLHPVSLEETGEGGGTSIGEITLVQVQAGGDAPQASGIVTQVVPM
ENQGLLTEMVPVDQQGLVTEVVPVERGMLTEVVRIGEDGTVTVTDGEELTADGLMAEVVP
TGEEGINEGIIAQIVPVQEGVESGGEGGISHTLPLPEGVQVVKVGPNGELEVERAPMGSQ
DGSVDGDGIGLLITAPDPEERSKEKDPDYQLPVKKPVRKGRKNKLRYKQEAADADISVYD
FEEQEEGRLVSSQDVGVEKAIAPKPPKPTRIKKKGAKKTFQCELCSYTCPRRSNLDRHMK
SHTDERPHCCHLCERAFRTVTLLRNHVNTHTGTKPHKCMECDMAFVTSGELVRHRRYRHT
HEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCGLCSYASRDTYKLKRHMRTHSGEKP
YECHVCHARFTQSGTMKMHVLQKHTDNVPKYHCPHCDAVIARKSDLGVHLRKQHAVLERE
LRCRYCRAIFHERYALMQHQRTHRNEKRFKCDQCEYACKQERHMIMHKRVHTGEKPFECT
LCDKTFRQKQLLDFHFKRYHDPSFVPTTYECSKCHRNFTRRSTMMKHFDMCDGELESGEQ
NGKARRGRRRGRKRKMQSRKHGSSSESDEMPTDEDEEEEELNEESVEVADEEVEEPEPPP
MKRRRGRPPKAKPGRPAKKVAGSAEIKTEPKTEPTDLDSTIDSVACGIIEIIPVTVGGPD
GPDDDEEEEEEEEAADGEEGGEGEEQEEEEEEGGAKEHVVVLAVETAADEGPKNDITPEM
ILSMMDQ
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaggaggtggcagaggccacaccctctggcgaggaggagctggacggcttc
actcggctgaaggaaggggggccgcctacccagggcacgggactcgtggatgatgacccc
acgtcaaacatacccaagaagcccgatgagtcggaggatggtgacctggaccaagtgcct
ctggtttcagaagtggctcttgcagtgaaagatggcactgaatcagcaggtggcactgta
gtttccgagcccgctgacacaaacgccaatgccacgattatggacagcgccgaggtgatc
tctatcgagatgtctcacatggcccccgacatgatggttcacgtgatgatcgacggtgcc
tccgaacagattgtcaacatggccgccgacgtcacggctccggtggaagccacctctgtc
gacagcgttgctgacgtaacagtggctgacgtgaccgtcgaagatgtggaaatgaaggat
gagacgctgcctttccatgctgctacagatggcgccgaggtgattgaattcatggacacc
gctgcggtgatggacgttgtggaagtcacggaagggacggaggcaaaagagagtgatgat
gcctttgccgatgccggatcgctgagggtcctgagcgtggagaccatggatactgccaca
tctggcataggtgaagtgacgaatgttttagaaaccaattttgccactgcagttgcagat
gattctattgccagcagcgcagcccagcctaaagagaacgacgattctgtacaggagatc
tccgccgagggaggtttcacagcctacgtgggcactgcagcagatgccgacgtcgctaca
aatgaacaggggttcacagaaagagacaccggtgatgaaaccaactcggctgaagtcgac
gctgttgtggagtccgttgacgttaatgagctgaaagcggaaacgtccgacaccactgat
gtcatcgccgtcatcgtgggcacagagatgacaaacgtggctgacggcagcaacaccagt
aacgccgatactgaagtggcagcgacgaccagctcgggcaatggcttgattgaatcgttg
gaagcaggcggagtggctggtggtgctactgttgtgagtgtgtccggaccagaggacgtc
gcgttcgtgacaaccataagcgtggcgagtcccctggacgtgagcactagcgtggccagc
gtgacggacgtgacttcggcggcgctgcgggccctgcaggccgtggcctcgcaacacgtg
ggtggtggggcgagcgcctccatctctgaggacacacacatcatcacactgcacccagtg
agcctggaagagacgggagaaggaggaggaacctccattggagagatcacgctcgtgcag
gtgcaggcaggtggggacgcgccacaggcttcaggcatcgtgacacaggtggtgcccatg
gagaaccagggcctgctcacggagatggtccccgtggaccagcagggcctggtgaccgag
gtggtacccgtggagagaggcatgctcaccgaggtggtgcgcatcggcgaggacggcacc
gtaactgtcaccgacggggaggagctcaccgcagacgggctcatggcagaggtggtgccg
acgggggaggaagggataaacgagggaatcatcgctcagatcgtgccggtgcaggagggg
gtcgagtctggtggtgagggaggcatcagccacacgctgccgctgccggagggggtgcaa
gtggtgaaagtggggcccaacggggagctggaggtggagcgggccccgatgggctcgcag
gacgggagtgttgacggggacgggattgggttgctcattactgcccccgaccctgaggaa
cgcagcaaggagaaggacccagactaccagcttcccgtaaagaagcctgtgcggaaaggg
cgcaagaacaagctgcgatacaagcaagaggcggccgacgccgacatctcggtgtacgac
tttgaggagcaggaggaggggcgtctggtgagcagccaggacgtcggcgtggagaaggcg
atcgcacccaagccacccaagcccacgcgcattaagaagaaaggagccaaaaagacgttc
caatgcgagctgtgtagctacacatgcccacgccgttccaacctggatcggcacatgaag
agccacacggacgagcgaccacactgctgccacctgtgcgaacgcgccttccgcaccgtc
acgctgctgcgcaaccatgtcaacacgcacaccggcacaaagccgcacaagtgcatggag
tgcgacatggcgtttgtgacgagcggggagctggtgcgccaccgccgctaccggcacacc
cacgagaagcccttcaagtgctccatgtgtgactacgccagcgtggaggtgagcaaattg
aagcgccacatccggtcgcacacaggcgaacgccctttccagtgcggcctgtgcagctac
gccagcagggacacctacaagctcaagcgccacatgaggacccattccggcgagaagccc
tacgaatgccacgtgtgccacgcgcgcttcactcagagcggcaccatgaagatgcacgta
ctgcagaagcacacggacaacgtgcccaagtaccactgcccgcactgtgacgccgtcatc
gcgcgcaagagtgacctcggtgttcacctccgcaagcagcacgcggtgcttgagcgcgag
ctgaggtgccgctactgtcgcgccatcttccacgagcgctacgccctcatgcagcaccag
cgcacgcaccgcaacgagaagcgcttcaagtgtgaccagtgcgagtacgcctgcaagcag
gagcgacacatgatcatgcacaaacgcgtgcacaccggggagaagccatttgagtgcacg
ctctgcgacaagaccttccgccagaagcagctcctcgacttccacttcaaacgctaccac
gaccccagctttgtgcccaccacttatgagtgcagcaaatgccaccgcaactttactcgc
aggagcacgatgatgaagcactttgacatgtgcgatggagagctggaaagtggcgagcag
aacggcaaggctcggcgcgggcgccgccgggggcgcaagcgcaagatgcagtctcgcaag
cacggctcgtcgagcgagtcggatgaaatgcccacggacgaggatgaggaagaggaggag
ctgaatgaggagagtgtggaagtagcggatgaggaagtggaagagccagagccgcccccc
atgaagcggcgccgtggccgccctcccaaggccaagccaggccgccccgccaagaaggtg
gctggctcagcagagatcaagacggagccaaagacggagcccacagacttggactccact
atagacagtgtggcctgcggcatcatcgagatcatcccggtgacggtgggcggccccgat
gggcctgatgacgacgaggaggaggaggaagaggaggaggcggcagatggcgaggagggg
ggtgagggggaagaacaggaagaagaagaggaggaggggggcgcgaaagagcatgtggtg
gtgttggctgttgagacggcggcagacgaggggcccaaaaacgacatcacgcccgagatg
atcctgagcatgatggaccaatga
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