Lethenteron reissneri (Far Eastern brook lamprey): 133357897
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Entry
133357897 CDS
T09663
Name
(RefSeq) cadherin-1-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133357897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133357897
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Major cadherins
133357897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
Cadherin_4
He_PIG
Fibulin_C
BACON_2
DUF5707
Motif
Other DBs
NCBI-GeneID:
133357897
NCBI-ProteinID:
XP_061432051
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All DBs
Position
60:4086433..4137291
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AA seq
797 aa
AA seq
DB search
MTPAGRAIVTLCVASAAIVIAASSTPFAQQASSRDGGCRPGFAVSHVCADIPKSVPSGHV
ILTLPFRSCGGMPAPTFAVRPRSLHVTSRGVLMTSRPLTLAAGSELHVAVRARGIHGGKT
WRSAARVLVRCHAQDGAVSSRCPSRVRREWTVPKPYVNENDPGPYPAFVTMYTSDKMKAH
MYKLTGPGADEDPVGLFYLDDHGRIYVKEAVDRETLKVYQMFVHAYDEQGHEVENPATMT
VLVTDVNDETPQFVEKNFTGTVLENQPAGTTVINIEATDGDDPATDHVIIMYTIISQKPP
LPKAFTIDRSSGTITTLIKLDREAVSQFLLEVNASDCNGSPIGLSNTTTVTIIVGDTNDS
PPEFTSPKYEGTVRENELVTQAVLLDIRDADAPGLPAWRAVYTVTSGNEEGHFAIATDAK
TNQGVLSVVKPLNFEAITTADKTVPLVVTVANEEKLLPGAVASLSSSATVLVRVTDVNED
AAFIPSVRMVECVEGSPLGSPLGVFSAQDPDTGTTHNFTYKIVSDKAGWLAIDPSTGALS
LAGDVDYEDPEYIRNGKYNVTVIAIDAGRPDFTCTGTVVLNIVDVNDHAPKLAGPLFATG
ASTPHLCLARPSEGLPLMATDDDSPAHGAPFYFQLVNKPPGTDELWEVVTLNATNARLQA
RVTPSGKGPLPGVHQLSVLLRDREGLGEARQITVRACHCLGLLKGSGCVTPAGSVGLGFD
GLAAIVFPILTLLLFGVLYCCFCRQPRPALKVPDVWAESLVQYNQEGGGENATTLSSLVN
NLDRDATFSKHGGLSSP
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgccgggagagcgatagttacgctgtgcgtggcgagcgccgctatcgtcatt
gccgcatcctcgactccgtttgcccagcaggcctcgtcacgtgatggcggctgccggccg
ggattcgccgtgagccacgtctgtgcggacatcccgaagagtgttccgtcaggccacgtt
atcctcaccctcccgttccgatcgtgcggcggcatgccggcgccgacgttcgcagtgagg
ccgcgctctctgcacgtgacctctcgcggggtgctcatgacgtcgcgacctctgaccctg
gccgcggggtcggaacttcacgtggccgtgagggcgcgcggcattcacggtggcaaaacg
tggaggagtgcagcacgggttcttgtgcggtgccacgctcaggatggtgcggtgtcgtct
cggtgcccgagccgcgttcgtcgagagtggacagttccaaaaccttacgtcaacgagaac
gatcccggcccctacccggccttcgtcaccatgtacacatcggacaaaatgaaggctcac
atgtacaagctcacgggccccggcgcggatgaggatcccgtggggctgttctacctggac
gaccatggacggatatacgtgaaggaagctgtggatcgcgagacgctgaaagtttaccaa
atgtttgtgcacgcgtacgacgaacagggccacgaagtcgaaaatcctgccacgatgacg
gtgctggtgaccgacgtcaatgacgagactccgcagttcgtggagaaaaacttcacggga
acggtgctggagaaccaaccagccggcacgaccgtaataaatatagaggcgacagatgga
gatgatccagctacagaccacgtcatcatcatgtacaccatcatctcccagaagccaccc
ttacccaaagcgttcaccatcgacaggagcagtggcaccatcactaccctgataaaactg
gacagagaggccgtgagtcagttcctgctggaagtgaacgccagtgactgcaacggctcc
cccatagggctcagcaacacgaccactgtgaccatcatcgtgggggacacaaacgacagc
cccccagagttcacctcccccaagtacgaggggacggtgcgggagaacgagctggtgacg
caggcggtcttgctggacattcgagatgcggacgctccgggcttgcccgcgtggcgagcc
gtctacaccgtcactagcggcaacgaagaggggcacttcgccattgccaccgatgccaag
accaaccagggcgtattgtccgtcgtcaagccactgaactttgaagcgataacaacggct
gacaagacggttcctctcgtggtgacggtggccaacgaggagaagctccttcccggcgcg
gtcgcatcgttgtcgtcgtctgccacggtgctcgtgcgcgtcacggacgtcaacgaggac
gcggctttcattccgtcggtgcgcatggtggagtgcgtcgaggggtcgccgctgggatcg
ccgctcggggtcttctccgcgcaggaccccgacactgggacaacgcacaacttcacctac
aagatcgtgtcagacaaggcgggctggctggcgattgacccaagcacaggagcacttagc
ttggctggggacgtggactatgaagaccccgagtacatccgcaatgggaagtacaacgtg
accgtcattgccatcgatgcaggtcgcccggacttcacctgcacaggaacggtggttctg
aacattgtggacgtcaacgaccatgctcccaagctggcggggcctttgtttgcaacaggg
gcctcaacgccacacctctgcctggccaggccttctgagggtcttccactcatggccacc
gatgatgactcgcctgctcatggggcccccttctactttcaattggtcaacaagcctccc
ggcaccgacgagctgtgggaggtcgtgactctgaacgccacgaacgcgcgattgcaggca
cgcgtgaccccctcaggcaagggccccctgcccggggtgcaccagctctcggtgctgctg
agggaccgggaaggactcggagaggcgagacagatcaccgtgcgtgcctgtcactgcttg
ggcctactcaagggctcgggttgcgtgactcccgctgggtcggtgggcctcggattcgac
ggcttggccgccattgtgttcccgatcctcactctgctgctgttcggagttctctactgc
tgcttctgccggcagccgcgaccggcgctgaaggtccccgatgtctgggctgagtcgctc
gtccagtacaaccaggagggcggtggtgagaatgcaacgactctctcatcgctggttaat
aatctcgaccgtgatgcaaccttcagcaaacacggtggactgtccagcccctga
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