Lethenteron reissneri (Far Eastern brook lamprey): 133358194
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Entry
133358194 CDS
T09663
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagosome
lrj04814
Motor proteins
lrj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133358194
09142 Cell motility
04814 Motor proteins
133358194
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133358194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrj03036
]
133358194
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133358194
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
133358194
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
133358194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
133358194
NCBI-ProteinID:
XP_061432398
LinkDB
All DBs
Position
61:complement(899311..929042)
Genome browser
AA seq
632 aa
AA seq
DB search
MSDKAELKAELERKKQRLAQIREEKKRKEEERKKKEVDVKKEPAPDESDLEKKRRETDAL
LQSMGIPADAPLSSVQDSPTLSKAVSTPSEAGSQESMETVAAGRTLQWDSDPTVLQLLAD
SESGRRGHKLGLAKVTQVDFPPRELVTYAKETQTPFPTSHPADEEDEEEEVAAQKPSSEP
EALVEQKEEEEKDAATHELTEEEKQQILASHDFLGFFTRSTRIIERALAEEGDIFFDYSG
RDGLEKEGEMQAGVKLSMQRQFYDEHWCKHRIVTCMDWSPQYPELLVSSYSNNEAAPNEP
DGVALVWNMKFKKSTPEYIFHCQSSVMSACFARFHPNLVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVLGTQNAHNLISVSTDGKMCSWNLDMLSQPQDSMELSHKQS
KAVAVTCMAFPLGDVNNFVVGSEEGSVYTASRHGSKAGICEMFEGHQGPITGIACHAAVG
PVDFSHLFATSSFDWTVKLWSTKSNKPLYSFEDNSDYVYDVAWSPTHPALFACVDGMGRL
DLWNLSNDTEVPTASVVLDGAPALNRVRWAQSGREVAVGDAEGRLWIYDVGEHVAVPRPD
EWTSFAKTLTELQANRADAEEEAAAKLTAAPL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaagcggagctgaaggcggagctggagcgcaagaagcagcggctggcgcag
atccgcgaggagaagaagcgcaaggaagaggagcgcaagaagaaggaggtggacgtcaag
aaggagccggcgcccgatgagtcggatctggaaaagaagcgaagggagacggacgccctc
ctgcagagcatggggattcccgccgatgccccgctgtcctcggtgcaggactcgccgacg
ctgtccaaggcggtgagcacgcccagcgaggccggcagccaggagtccatggagacggtg
gccgccggaaggaccctgcagtgggactctgaccccacggttttacagctcctcgcagac
tctgagtcagggcggagaggccacaagctgggcctggccaaggtgacgcaggtggacttc
ccgccacgggagctcgtcacctacgccaaggagacgcagacgccattccccaccagccac
cccgcagacgaggaggacgaggaggaggaggtagcggcgcagaaaccctcctcggagccc
gaagcgctggtggagcagaaggaggaggaggagaaggatgctgccacgcacgagctcacc
gaggaagagaagcagcagatcctcgcctcgcacgacttcctgggcttcttcacgcgcagc
acgcgcatcatcgagcgtgcgctcgccgaggagggcgacatcttcttcgactacagcggc
cgcgacggcctggagaaggagggggagatgcaggcgggcgtgaagctgtccatgcagcgg
cagttctacgacgagcactggtgcaagcaccgcatcgtcacctgcatggactggtcccca
cagtacccggagctcctcgtgtcctcgtacagtaacaacgaggcggcgcccaacgagccg
gacggcgtggcgctcgtgtggaacatgaagttcaagaagtccacacccgagtacatcttt
cactgccagtcgtcggtgatgtccgcctgcttcgcgcgtttccacccgaacctggtggtg
ggcggcacctactcgggacagatcgtgctgtgggacaaccgctccaacaagcgcacgccc
gtgcagcgcacgcctctctcggccgccgcacacacgcatccagtttactgtgtcaacgtc
ctgggaactcaaaatgctcacaacctcatcagcgtctccaccgatggcaagatgtgctcc
tggaatcttgacatgctctctcagccccaggacagcatggagctgtctcacaagcagtcc
aaggcggtggccgtcacgtgcatggccttcccgctcggcgacgtcaacaacttcgtggtg
gggagcgaggagggctcggtgtacacggcgtcacggcacggcagcaaggctggcatctgc
gagatgtttgagggccaccagggccccatcacgggcatcgcctgccatgccgccgtgggg
cccgtcgacttctcccacctcttcgcgacgtcgtccttcgactggacggtcaagctgtgg
agcaccaagagcaacaagccgctgtactcgtttgaggataactcggactacgtgtacgac
gtggcgtggtcgcccacgcaccccgcgctcttcgcctgcgtggacggcatgggccgcctg
gacctctggaacctgagcaacgacaccgaggtgcccacggcgagcgtggtgctggacggg
gcgccggcgctgaaccgcgtgcgctgggcccagtcgggccgcgaggtggccgtcggtgat
gcagagggccgcttgtggatctacgacgtgggagagcacgtggccgtgccgcggcccgac
gagtggacgtcattcgccaaaacgctcacggagctgcaggcgaaccgcgccgacgccgag
gaagaggccgccgccaaactcacagccgcccccctctga
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