| Entry |
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| Name |
(RefSeq) LOW QUALITY PROTEIN: protein CASC3-like
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| KO |
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| Organism |
lrj Lethenteron reissneri (Far Eastern brook lamprey)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lrj00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133358285
03015 mRNA surveillance pathway
133358285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lrj03019]
133358285
Messenger RNA biogenesis [BR:lrj03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133358285
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
61:complement(8718097..8737139)
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| AA seq |
644 aa
MSPTVFEDDAPPTIAGGKNSKRDEEEEDQKNPAFVPRKGLFFEHDIRGGNNKEDARAKVH
NRKLWRDAGRWEHDRFREDEQAPKSREELVALYGYDIRSGAHADDSADLRSPRYRSPSDR
WSRESPPVNRGPYQAPKREPVERPARLRDEDRDTERRPAPRRPGPTTAGPAALPGRPRAY
VEQRAYVEQRAYTEPRARAYTQGDSSRDQXPGTPAARDGTRSSPQRNQQRHQQHNGNTEE
EGEKRAEILSAGTEAEVGARCAFAATAAATVAPGTGDAPFAVDLAQDKAPERKSYSRVRR
LRNKPTELPGQASTTDPISPAPLSALAPSTVPLVALPETQAATALPHQHNPQQLQHQQPL
APPLKPLGERTRPIAALLPQPLWDVPVLEPSPVGRLEHGMAQISLGQTWNPGAQPHYLPT
QREHRGGATHLPVNSVPPPFNRIEDLGGQAGRAKRYSSQRSRPVPEPHPTPPMHIPLIEG
SYYDPNTAYQAPLYGHGGDSPAAIPPQGMMVQPDLNLPHPGLHPHQSPTHMYAPPVSMAT
GQPPPPAQMLGYFPSNIMYPGAALPNPGYTYTPAPIPPPPPPPAHIFPPPQAQSQVYGGV
TYYNTAQQQAQPKPSPPRRPSQPVSVKPPPEVSRKDRLKERSNV |
|---|
| NT seq |
1935 nt +upstreamnt +downstreamnt
atgtctccgaccgtgttcgaggatgacgccccgcccaccatcgcaggcggcaagaattcc
aagcgggacgaggaggaggaagaccaaaagaacccggcgtttgtgccgcggaaagggctc
ttcttcgaacacgacattcgaggaggcaacaacaaggaggatgccagggccaaggtgcac
aaccgcaagctgtggcgggacgcgggccgctgggagcacgatcgcttccgcgaggacgag
caggcacccaagtcgcgcgaggagctcgtggcgctgtacggctacgacatccgctcgggc
gctcacgccgatgacagcgctgacctccgatcgccacgataccgcagccccagcgatcga
tggagccgggagagtccccccgtgaaccgcgggccttaccaggcccctaagcgggagccc
gtcgagcggccggcacgtctgcgcgacgaggacagggacacggagcggaggccggcgccg
cggaggccgggcccaaccaccgccggtcccgcggcactgcccggcaggccccgcgcctac
gtggagcagcgcgcctacgtggagcagcgcgcctacacggagccgcgcgcccgcgcctac
acacagggagactcgagcagggatcagnccccggggacgccggcggcgcgggacggcact
cggtcgtccccgcagcgtaaccagcagcggcaccagcagcacaacgggaacacggaggag
gagggcgagaagcgggcggagattttgtccgcgggcacggaggcggaggtaggagcgagg
tgcgcttttgctgctaccgccgcagcgaccgtggcgccgggaaccggggacgcgccgttc
gcggtggacctggctcaggacaaggcgccggagcggaagtcgtactcgcgcgtgcgccgc
ttgcgcaacaaacccacagagctgccgggacaggcgtccacgacggaccccatctcgccg
gcgccgctttcggcgctggcaccgagcacagtccccctcgttgcgctgcccgagacgcag
gcggccaccgcgctaccgcatcagcacaatccgcagcagcttcagcatcagcaaccgctg
gcgccacccctaaagccgctcggtgagcgcacgagaccgatcgccgcgctgctgccgcag
ccattgtgggacgtgcccgtgttggagccttcgcccgtgggtcgtctggagcacggcatg
gcgcagatcagcctcggccagacctggaaccccggggcacagccgcactaccttcccacg
cagcgcgagcacagaggtggtgccacgcatctccctgtcaattcagtgcctccaccgttc
aaccgaatcgaggatctgggcggccaggccggccgggcaaagcgctactcgtctcagcgc
agtcggccggttcctgagccgcaccccaccccccccatgcacattccgctcatcgagggc
tcctactacgatccaaacacggcataccaggctccgctgtacgggcacggtggggacagc
ccggctgccatccctccccagggcatgatggtgcagcccgacctgaacctcccacaccct
gggctgcacccgcaccagtcgcccacccacatgtacgcgccgcccgtctccatggcgacg
ggccagccaccaccgccggcccagatgctcggttacttccccagcaacatcatgtacccg
ggggcggcgttgcccaaccccggctacacctacacgcctgcccccataccgccgcctccg
ccgccgcccgcacacatcttccctccaccgcaggcgcaatctcaggtttatggcggagtg
acgtactacaatacggcgcagcagcaggcgcagcccaagccgtcgccgcctcgccgaccc
tcccagcccgtctctgtgaagcccccgcctgaggtgagcaggaaggacaggctgaaagaa
aggagtaacgtgtga |
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