Lethenteron reissneri (Far Eastern brook lamprey): 133358303
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Entry
133358303 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin-like
KO
K05717
fibronectin 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
lrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133358303
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133358303
09142 Cell motility
04820 Cytoskeleton in muscle cells
133358303
04810 Regulation of actin cytoskeleton
133358303
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133358303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133358303
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133358303
00536 Glycosaminoglycan binding proteins [BR:
lrj00536
]
133358303
04990 Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
133358303
Membrane trafficking [BR:
lrj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
133358303
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
133358303
Glycosaminoglycan binding proteins [BR:
lrj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133358303
Domain-containing proteins not elsewhere classified [BR:
lrj04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
133358303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
Motif
Other DBs
NCBI-GeneID:
133358303
NCBI-ProteinID:
XP_061432543
LinkDB
All DBs
Position
61:complement(2430169..2523768)
Genome browser
AA seq
2475 aa
AA seq
DB search
MHVPAAAAAAAAPLLLLMCVAATAPGAVRAKTMPQAQRVAAVEATGEAVVQKDCVDNGRM
YHLQEQFERTYHGRALRCTCLGGQALDCEAVQQPSGEQVCFDQYTGRRYSVGETWERPRK
GMVWDCTCLGAGIGRISCSTENRCHDQGQSYRLGERWKRPHSTDGQMLECVCLGNGKGEW
TCNPVAGAAERCYDSVLGSSFAVGEDWERPYHTWMIVDCTCLGGGLGQVSCSSKNRCNDQ
DSQSSYRVGETWTKTDAAGDLLHCVCTGNGRGEWKCEVHSTAVAAVHTGEFAGVEEAQFR
PSAQCELDNGATYATGQQWLKMQGTDRMLCTCLGNGVSCQTSGVMTYGGNAPGEPCVFPF
MYTGLSYTACVGEGRSDGKLWCSTTGNYDQDRKYTFCRSESAVIQTRGGNSHGALCHFPF
QYNQRSYTECTAEGRPDAMKWCSTTEHYDEDRKFGFCPMEAHEEVCSSQGVQYRVGDQWD
KRHQMGHMMRCTCNGNGRGEWNCIPYAQLLDRCVVDETEYNVNQTFSRKHAEGHMMNCTC
FGQGRGRWACDPIDQCQDLELMQFYQIGETWNKLYKGTAYICGCYGNSVGEWNCRPQTTE
IASNNPVQVTIKEDNKHRHSQQLQWTNTQGRPVNWYFLKWRLKGSQAPWKEARVPAQRNT
YVITGLRPGMVYEGQLITQFSHGATAISKFEFSTASVPLTPWEGERERLPGTEQRVSDAV
TEVTSNSFVVAWASAGEVMSGYRVEYELTEDSSSREIINLPGTATSITLDSLLPGREYTV
TVIELGARGLERIILTTTQTTAPDAPENYSIDEVTESTIVIRWRLPSAQVSAFRIIYLPN
VDGGESTDLHLPPDVTRARLVDLLAGHTYNISVFSVAEDLESPPLFMQVSTRGSAEIEQR
PPLPPSDLTFVTVGETKATLTWAPPPSAEVRGYRVVATAAPGQGRVPTREVTVTSDLYAE
VGGLLPGHTYRFQVFAVYPGGGESPPLQGEQSTKLDAPRDVRFVEVGETSVTAAWRAPRG
PIAGYLVRCEPTDGGEPLERQLGADVASFTVDGLRAGSEYVVTVYALARGDQERSPGVSG
IVSTQSVREMSEFVIEVTESTIVVSWNSVPRLSIKVRVAPVEGGGDAREFESDSGRLLIE
DLTPGVDYTVTIRVLVDGQPRGQPIQRHVTTALPPPTEIKVETNGNPGELQVSWESSEVQ
AITAYRVTCVADGHGGSRQVLEEVVSPQHNYTVFEHLLPGVQYNVSVYAVGMDAESFPTS
TVSLPEIPPPKGLRFSEESDTSVTMQWQHPNLPNVAGYRLTVAAPSSSSDHGSPHVDSAG
RPVASGRRPQHGGAAGGEPLLSLQLGPDAERYTVNGLEPGIDYHFSLATVTEQGQSLPAA
QWHSTAVPPPTSLRFSHVREDGFRLSWSPPGTLTTPAKFLVRCRGHGGDRADVDVAAGSS
TAVLSGLQAGTEYQVFVHTLLDGQESVALTGTQYTAPDAPTGLQFSHVTPTAFTVEWRAS
LAPVEGYRVRFGREGHTDPREEWVPTPGHSASLSGLAPGEQYTVAVYALSSSRLESRPLT
GRQITPVDSPTNLQVTSQSATSFLVSWTPPTTYVSNYIVSYHYGRQPERQVTVSGRESSV
LVEDLQPGAEYSVSLRAVTERGDQPAGEALTTTHATGIDGPTDVEAVEVRDTSILLRWAA
PRAPVQGYRVSCSPTGGHGGAPIAKTLSRGQSEVTIDSLSPTTEYLIQVVALGFAQNSEA
TSITVQTGVDRPRGLTFRDVGVDSMVASWQAPEGRVTGYRVTFQGAGDEDGGFSREVLPA
PGPGADSVIVGGLRPGQEYTVRVFALNGHRESVPLTGTQITAIPPPTALEFPEVGADSVA
VRWSAPRPDAGLTGVRVVFEPRSRKASRKEISEGPRATATTVTGLTAGVDYAVSVYAVKD
ALTSKPLQGTVRTVESIPAPSKVSVTETHAGSVTLEWRSRPDPLTGFLIVVQPAAAGAGG
RPAEHTVPPGARTFTVTGLQPGVRYVISIYAVRGGRRSQPVTVTTATAVDSPTGLKRVTS
SEDSLTLGWTRPRASITGYLLTCQAARGGPAREHRPDVSATQYTITDLQSNTEYVFSLVA
VQDTVRSQPLRGSFRTAEAVRPELLATPAPRPPIAPAKVPAGRELPSRRGDTSPLSSETR
FEGREMGPWAGQRHVETIVTELRPGASLPSHQAGMQLQVDGVALVAPAVLAPEVHLEQHL
TETEVTWVPRHQASEYLVSCIPVGAADGTAPIQMRLPGSLSSTTLTGLMTGTQYSVVVEA
LHGSRRDKVLEEFITLLNTVPMNLTGDATEDRCMDEDTGRDYAVGEEWERPSNTGFLFLC
RCLGHGSGHIRCDSSKWCHDNGQNYRIGEQWSTTTATGRRMSCTCLGNDLGQFKCEPDEN
TCYEGGKEYTVGQKWMRKNRGLDCTCTCYGGRRGYRCDCGAVQNVASSLAQGHTLHQIRN
QLLRRPFPNKCTFQC
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcccagcggcggcggcggcggcggcggctccgcttctgctgctgatgtgcgtg
gctgcgaccgcgccgggcgccgtccgcgcgaaaacgatgccccaggcgcagagggtcgcg
gcagtggaggcgaccggtgaagccgtggtgcagaaggactgcgtggacaatggcaggatg
taccatctgcaggagcagtttgagcgcacgtaccacgggcgcgccctgcgctgcacgtgc
ctgggcggccaggcgctggattgcgaagccgtccagcagccgagcggcgagcaggtgtgc
ttcgaccagtacacggggcgacgctactcggtcggggagacctgggagcggcctaggaag
ggcatggtgtgggactgcacgtgcctgggcgcgggcatcggacggatcagctgctccacc
gagaaccggtgccacgaccagggccagtcgtaccgtctcggcgagcgctggaaacggccg
cacagcacggacggtcagatgctcgagtgcgtctgcctgggcaacggaaagggagagtgg
acgtgcaaccccgtggccggggcggcggagcgctgctacgactccgtcctgggctcctcg
ttcgctgtgggtgaggattgggagcggccctaccacacgtggatgatcgtcgactgcacc
tgcttgggtggtggcctcggccaagtgtcctgctcctccaaaaatcgctgcaacgaccag
gacagccagagctcgtaccgcgtcggggagacgtggacgaagacggacgcggcgggcgac
ctgctccactgcgtgtgcacgggcaacgggcgcggggagtggaagtgcgaggtgcacagc
acggcagtggccgccgtgcacaccggcgagttcgccggggtggaggaggcgcagttccgc
ccgtcggcgcagtgcgagctggacaacggagccacctacgccacggggcagcagtggctc
aagatgcaagggaccgaccgcatgctctgcacctgcctgggcaacggcgtcagctgccag
acgtccggtgtgatgacgtacgggggcaacgcgccgggggagccatgcgtcttccccttc
atgtacacggggctctcctacacggcgtgcgtgggggagggacgcagcgacggcaagctg
tggtgcagcaccacggggaactacgaccaggaccgcaagtacaccttctgccgctccgag
tccgctgtgatccagacgcgcggcggcaactcgcacggagccctctgccacttccccttc
cagtacaaccagcggagctacacggagtgcaccgcagaggggcggcccgacgccatgaag
tggtgcagcaccacggagcactacgacgaagatcgcaagttcggattctgccccatggag
gcccacgaggaggtctgctcgtcgcagggcgtgcagtaccgtgtcggcgaccagtgggac
aagcgccatcagatggggcacatgatgcggtgcacctgcaacgggaacggccgcggggaa
tggaactgcattccttacgcccagctgctggatcgctgcgtggtggacgagacggagtac
aacgtgaaccagacgttctcgcgcaagcacgccgagggccacatgatgaactgcacctgc
ttcggccagggccggggccgctgggcctgtgaccccatcgaccagtgccaagacctggag
ctgatgcagttttaccagatcggagagacgtggaacaagctgtacaagggcacggcgtac
atctgcggctgctacggcaactccgtgggcgagtggaactgccgcccgcaaaccacggag
atcgcctccaacaaccccgtacaggtcaccatcaaagaggacaacaagcaccggcactcc
cagcagctgcagtggaccaacacgcaaggacgccccgtcaactggtacttcctcaaatgg
cgcctgaaaggctctcaggccccgtggaaggaggcccgagttccggcccagcgcaacacc
tacgtgatcacgggcctgcggccgggcatggtgtacgagggccagctcatcacacagttc
tcccacggcgccaccgccatcagcaagttcgagttcagcaccgcctccgtccccctgacg
ccgtgggagggcgagagggagcggctacctggcacggagcagcgcgtgtcggacgccgtc
accgaggtgacgtccaacagcttcgtggtcgcctgggcctcggccggcgaggtcatgtcc
gggtaccgcgtcgagtacgagctcacggaggacagctcctcgcgcgagatcatcaacctt
cccgggaccgcgacgtccatcacgctggacagcctcctgccgggtcgcgagtacacggtc
accgtcatcgagctgggcgctcgtggcctggagcgcatcatcctcaccaccacgcagacg
accgccccggacgccccggagaactactcgatcgacgaagtcaccgagtcaacgatcgtc
atccgctggaggctacccagtgcgcaagtctctgcgttccgcatcatctacctgcccaac
gtggacggcggagagagcacggacctgcacctcccgccggacgtgacgcgtgcgcgcctc
gtggacctcctggcggggcacacctacaacatcagcgtcttctccgtggccgaagacctt
gagagcccccctctcttcatgcaggtgtccacccggggctcagcggaaatcgagcaaagg
ccgccgctgccgcccagcgacctgaccttcgtgaccgtgggcgagaccaaggccacgctc
acctgggcccctccgccgtccgcggaggtgcgcggctaccgggtcgtggcgacggccgca
ccgggccagggccgcgtccccacccgcgaggtgaccgtgacctccgacctgtacgcggag
gtgggtggcctcctgccgggccacacctaccgcttccaggtgttcgccgtctaccccggc
ggcggggagagcccaccgctgcagggagagcagagcaccaaactggacgctccgcgggac
gtccgcttcgtggaggtgggcgagacgagcgtgacggcggcgtggcgagcgccgcgcggg
cccatcgctggctacctggtgcgctgcgagcccacggacggcggcgagcccctggagcgc
cagctgggcgccgacgtggcgagcttcacggtggacggactgcgggcgggcagcgagtac
gtggtcacggtgtacgcgctcgcacgcggggaccaggagcgcagccccggggtcagcgga
atcgtctccacgcagtcggtgagggagatgtcggagtttgtgatcgaggtgaccgagtcc
accatcgtagtgtcgtggaacagcgtgccccggctctccatcaaggtgagagtggctccc
gtggagggaggtggcgacgctcgggagttcgagtcggactcgggccgcctgctcatcgag
gacctcacgcccggcgtggactacaccgtcaccatccgcgtgcttgtcgacgggcagccg
cgcgggcagccaatccagcgccacgtcacgaccgccttgcctccccccactgagatcaaa
gtggagaccaacggaaatcccggggagctgcaggtctcctgggagagcagcgaggtgcag
gccatcacggcgtaccgcgtgacctgcgtggcggacggccacggcggctcgcggcaggtg
ctggaggaggtggtgtcaccgcaacacaactacaccgtgttcgagcacctgctgcccgga
gtgcagtacaacgtgagcgtctacgccgtggggatggacgccgagagctttcctacgtcc
accgtcagtctacctgaaatcccgccgcccaaggggctgcgcttttcagaggagtccgac
accagcgtcacgatgcagtggcagcaccccaacctgcccaacgtggcggggtaccgcctc
acggtggccgccccaagctccagctcggaccacggctcgccgcacgtggacagcgccggc
cgccccgtcgcgtccggtcgccgcccgcagcacggaggagcggcaggaggagagcccctg
ctgagtctgcagctggggcccgacgcggagcggtacacggtgaacggcctggagcccggc
atcgactaccacttctccctggccacggtcacggagcagggccagagcctgccggccgcg
cagtggcacagcacggccgtgccgccccccacgagcctgcgcttctcgcacgtgcgcgag
gacggcttccgactcagctggtcgcccccggggacgctgacgacgcccgccaagttcctg
gtgcgctgccgcggccacggcggggaccgcgccgacgtggacgtcgccgccggcagcagc
acggcggtgctgagcggtttgcaggctggcacggagtaccaggtgttcgttcacaccctc
ctggacgggcaggagagcgtggctctcaccggcactcagtacacagcgcccgacgctccg
acgggcctgcagttctcgcacgtgacgccgacggccttcaccgtcgagtggcgggcgtcg
ctcgcccccgtggagggctaccgcgtgcggttcggccgcgagggccacaccgatccccgg
gaggagtgggtcccgacgcccgggcactccgcaagcctcagcggcctcgcgcccggcgag
cagtacacggtggccgtctacgcgctgtccagcagccgcctggagtcgcggccgctcacc
ggtcgccagatcacacccgtggacagccccaccaatctccaggtcaccagccaatcggcc
accagcttcctcgtcagctggactccgcccaccacctacgtgtccaactacatcgtgagc
taccactacgggaggcagccggagcgtcaggtgaccgtgtctgggcgggagagctccgtg
ctcgtcgaagacctgcagccgggcgcggagtattcggtcagcctacgcgcggtcacggag
agaggagaccagcccgcgggagaagccctcaccaccacgcacgccacgggtatcgacggt
cccacggacgtggaagcggtggaggtgcgcgacacgagcatcctcctgcgctgggccgcc
ccccgcgcccccgtccagggctaccgggtctcctgctcccccacggggggtcacggcggg
gcccccatcgccaaaaccctctccaggggtcagtcagaggttacgatcgactcgctgtct
ccgaccacggagtatctcatccaggtggtcgccctgggattcgcgcaaaacagcgaggcg
acgagcatcacggtgcagaccggcgtggaccgcccccggggcctcacgttccgggacgtc
ggcgtggactcgatggtcgcctcgtggcaagcgccggagggccgcgtcacgggctaccgg
gtcaccttccagggcgcgggagacgaggacgggggattctcgcgcgaagtgctgcccgcg
ccgggacctggcgccgattcggtgatcgtcggcgggctgcggccgggccaggagtacacg
gtgcgcgtgttcgcgctgaacgggcaccgcgagagcgtgccgctcaccggcacgcagatc
acggccatcccgccgccgacggcgctggagttcccggaggtgggcgcggactcggtggcg
gtgcgctggagcgcgccgcggcccgacgccggcctcacgggcgtccgtgtcgtgttcgag
ccgcgctcccgcaaggcctcgcgcaaggagatctccgaggggccccgcgcgaccgccacc
accgtcacggggctcacggcaggagtggactacgccgtgtccgtctacgccgtcaaggac
gccctgacaagcaagcccctgcagggcaccgtgcgcaccgtggagagcatccccgcgccg
tccaaggtgtcggtgacggagacgcacgccggctcggtgacgctggagtggcgctcgcgc
cccgacccgctgaccggcttcctgatcgtcgtgcagccggcggcggcgggcgccgggggg
cgccccgcggagcacacggtgccgcctggcgcgcgcaccttcaccgtcaccgggttgcag
cctggagtgcgctacgtcatctctatctacgccgtgcgtgggggcaggagaagtcaaccc
gtcacagtcaccaccgccaccgccgtggactcgcccacaggcctgaagcgcgtcacctcc
tcggaggacagcttgaccctgggctggacgcgcccgagggcctccatcaccggctacctg
ctcacctgccaggcagcccgaggagggcccgcgagggagcacaggcctgacgtcagcgcg
acccagtacaccatcaccgatctgcagtcgaacacggagtacgtgttcagcctcgtggca
gtgcaggacaccgtgagaagccagcctctgcgtggctccttccgcaccgctgaggctgtg
aggccggaactgctggcgacgccagcaccccggccgcccatcgctcccgcgaaggttccc
gcgggccgggaactcccgtcccggcgaggggacacctcgcccctgtcgtcggaaacgcgc
ttcgaaggacgcgagatgggaccgtgggccggccagcggcacgtggaaacgatcgtgaca
gaactccgccccggcgcatcgctgccgtcccatcaggccggcatgcagctgcaggtggat
ggcgtggccctggtggcgcccgctgtcctcgcccccgaggttcatctcgagcagcacctc
accgaaacggaggtgacgtgggtgccgcgccaccaggcctcggagtacctggtgtcgtgc
atccccgtcggcgccgccgacggcaccgcgcccatacagatgcggctgccaggcagcctg
agcagcaccacgctgacggggctcatgacgggcacgcagtacagcgtggtggtggaggcg
ctgcacggctcgcgtcgagacaaggtgctggaggagttcatcaccctgctcaacaccgtg
ccgatgaacttgacgggcgacgcgacggaagaccgctgcatggacgaggacacggggcgt
gattacgcggtgggcgaggagtgggagcgcccctccaacaccggattcttgttcctgtgt
cgttgcctgggacacggcagtgggcacatccgctgcgactcttccaaatggtgccatgac
aacggccagaactaccgcatcggcgagcagtggagcaccaccacagccacggggcgccgc
atgagctgcacctgcctggggaacgacctcgggcagttcaagtgtgaaccagatgagaac
acgtgctacgagggtgggaaggagtacaccgtgggacagaagtggatgcgcaagaaccgc
ggccttgactgcacctgcacgtgctacggaggacgcaggggctaccgttgcgactgcggt
gccgtgcagaacgtggcgtccagtttggcccagggacacactctccatcaaatccgcaac
cagctcctccgccgcccatttccgaacaaatgcacgtttcagtgctga
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integrated database retrieval system
