Lethenteron reissneri (Far Eastern brook lamprey): 133358335
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Entry
133358335 CDS
T09663
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagosome
lrj04148
Efferocytosis
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133358335
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133358335
04148 Efferocytosis
133358335
09144 Cellular community - eukaryotes
04510 Focal adhesion
133358335
09142 Cell motility
04820 Cytoskeleton in muscle cells
133358335
04810 Regulation of actin cytoskeleton
133358335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133358335
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133358335
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133358335
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133358335
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
Integrin_b_cyt
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
DUF2975
Motif
Other DBs
NCBI-GeneID:
133358335
NCBI-ProteinID:
XP_061432590
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Position
61:complement(2571004..2629326)
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AA seq
833 aa
AA seq
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MGLLATAAVQQQQLMVLLLLMMPLLKGGAQAVESNPCVFGGADSCQECLLLHPDCGWCQH
EEFRGSPAGGLSRCDLVRRLLQAGCPAEQIEAPRSGRSITKDMPLSEKLDTAAAGGGGGG
LAAVVQQSPQAVTLNLRPGDPVSFEVRVRQVEDYPVDIYYMMDLSLSMHDDLATMQLLGS
RLAAEMAGLTSNLRLGFGSFVDKPASPYAFSAPAYLHNPCAGYKRFPKCVPSFGFRHLLS
LTDEVDRFNEEVKRLNVSRNKDAPEGGFDAIMQAAVCGDRIGWRKEASHLLVFATDAASH
LALDGRLGGVLRPHDGHCHLDNNDSYSAADILDYPSLGFLGEKLAENNINLIFAVTTPYF
GLYKSYTELLPGATVGILANDSSNVIELIVSAYNKIRSKVELEVYEQPDDVVLSFTAVCQ
NGTVRPGQRQCGGLRVRDTVSFTVTAEARGCPRGAGDDGAGTSGAAVGPGARSYERNFTI
KPVGFRDSLHVTALVRCGCACEASVVLRSPHCSGGYGSLSCGLCRCNPGRIGELCECQEG
ELGPSGSAPGSACRMRERSLPCSGRGECVCGQCLCHASEFGRVSGAFCECDNFSCLRHKG
LLCSGNGHCECGECRCGPDWVGESCNCTTRTEACLGADGRLCSGRGLCSCGRCVCTQPGA
FGDVCQKCPTCPDACSIKKECVECRLFQRGRLWEDGSCAQMCVDEIQQVETIDESHKDAV
TCSYKTQDDCIMSFTYTEDSDEKSVLAALKEPECAHGVSETNAVLCVVAGVLLAGVAALL
AWKLMVTVQDRRAFSRFQNDRMHAKWGAGSNPLFPNSNHSEVSFHGLPLPSGN
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccttgctactgctgccgtgcaacaacaacagctgatggtgctgctgctgctg
atgatgccgctgttgaaaggtggcgcacaagcggttgagtcgaatccgtgtgtgtttgga
ggggccgattcatgccaggaatgtctgctgttgcacccggattgtggctggtgccaacat
gaagagttcaggggcagccccgcgggaggcctgtcacgctgtgacctggttcgccgcctc
ctgcaggccggctgccccgccgagcagatcgaggctcccagaagcgggcggtcgatcacg
aaggatatgccgctgagcgagaagttggacactgcggcagctggcggcggcggcggcggt
ttagcggctgtggtgcagcagtcgccgcaagccgtgactctgaatttgcggcccggggac
cccgtgagctttgaagttcgggttcgccaagtggaagactacccggtggacatctactac
atgatggacctgtctctgtccatgcacgacgacctggccaccatgcagctgctcggctcc
cgcttggcggcggagatggcggggctcaccagcaacctgcgtctgggcttcggctcgttt
gttgacaaaccggcctctccctacgccttctcggcgccggcgtaccttcacaacccttgc
gccgggtacaagcgcttcccgaagtgcgtgccgtcgttcggattccgccacctgctctcg
ctcaccgacgaggtggaccgcttcaacgaggaggtgaagcgtctcaacgtctcccgcaac
aaggacgccccggagggtggcttcgatgccatcatgcaggccgcggtgtgcggggatcgc
attggctggcgcaaggaggcgtctcacctgctggtgttcgccaccgacgctgcctcgcac
ctggcgctggacggccggctcggtggggtcctgcggccccacgacgggcactgccacctc
gacaacaatgacagctactcggccgccgacatcctggattacccctccctggggttcctc
ggtgagaagttggccgaaaacaacatcaacttaatttttgccgtgaccaccccatatttt
ggtctgtacaagagctacacggagcttctgccgggtgccacagttgggatcctcgcaaac
gactccagcaatgtcatcgagctcatcgtatccgcgtacaacaagatccgctcgaaggtc
gagctggaggtgtacgagcagccggacgacgtggtgctctccttcacggccgtgtgccag
aacggcacggtgaggcccggccagcggcagtgcggaggcctccgcgtgagggacacggtg
agcttcaccgtcacggcggaggcgcgtggatgcccccgcggcgccggggacgacggcgct
ggcaccagcggcgccgccgtgggccccggcgcgcgttcctacgagcgcaacttcacgatc
aagcccgtgggcttccgcgacagcctgcacgtgacggcgctggtgcggtgcggctgcgct
tgcgaggcgagcgtcgtgctccgcagcccgcactgctcgggggggtacggctcgctctcc
tgcggcctgtgccgctgcaaccccggcaggatcggggagctgtgcgagtgccaggaggga
gagctgggaccgtccgggagtgcgccgggctcggcgtgccgcatgagggagcgcagtttg
ccgtgcagcggccgtggggagtgcgtgtgcggccagtgcctgtgccacgccagcgagttt
ggccgtgtctctggggccttctgcgagtgcgacaacttctcgtgcctccgtcacaagggg
ctgctgtgttccggcaacgggcactgcgaatgcggcgagtgccgctgtggccccgactgg
gtcggcgaaagctgcaactgcacgacgcgcacggaggcctgcctgggcgccgacgggcgt
ctctgcagcggccgggggctgtgctcgtgcggccgctgcgtatgcacccagcccggcgcg
ttcggcgacgtctgccagaagtgtcccacgtgccccgacgcctgcagcatcaaaaaggag
tgcgtcgagtgccggctgttccagcgggggcgcctctgggaggacggctcgtgtgcgcag
atgtgcgtcgacgagatccagcaagtggagacgatagatgagagtcacaaggacgccgtg
acctgcagctacaagacccaggacgattgcatcatgtcgttcacttacacagaggactcg
gacgagaagtccgttctggctgcgctcaaggagccagagtgcgcccacggcgtgagcgag
accaacgcggtgctgtgcgtcgtggccggcgttctgctcgccggcgtcgccgctctgctc
gcgtggaagctcatggtgacggtgcaggaccggcgcgctttctcgcgcttccagaacgac
cgcatgcacgccaagtggggcgcgggctccaacccgctcttcccgaactccaaccactcc
gaggtctccttccacgggctgccgcttccgtctgggaattga
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