Lethenteron reissneri (Far Eastern brook lamprey): 133358337
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Entry
133358337 CDS
T09663
Name
(RefSeq) integrin beta-1-B-like
KO
K05719
integrin beta 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04145
Phagosome
lrj04510
Focal adhesion
lrj04512
ECM-receptor interaction
lrj04514
Cell adhesion molecules
lrj04530
Tight junction
lrj04810
Regulation of actin cytoskeleton
lrj04820
Cytoskeleton in muscle cells
lrj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
133358337
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133358337
04514 Cell adhesion molecules
133358337
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133358337
09144 Cellular community - eukaryotes
04510 Focal adhesion
133358337
04530 Tight junction
133358337
09142 Cell motility
04820 Cytoskeleton in muscle cells
133358337
04810 Regulation of actin cytoskeleton
133358337
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133358337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrj04131
]
133358337
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133358337
04515 Cell adhesion molecules [BR:
lrj04515
]
133358337
04090 CD molecules [BR:
lrj04090
]
133358337
Membrane trafficking [BR:
lrj04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
133358337
Exosome [BR:
lrj04147
]
Exosomal proteins
Proteins found in most exosomes
133358337
Cell adhesion molecules [BR:
lrj04515
]
Integrins
Integrin beta subunits
133358337
CD molecules [BR:
lrj04090
]
Proteins
133358337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Hydrolase
Motif
Other DBs
NCBI-GeneID:
133358337
NCBI-ProteinID:
XP_061432591
LinkDB
All DBs
Position
61:complement(5691506..5733796)
Genome browser
AA seq
800 aa
AA seq
DB search
MEVRLLLRTALAVTLLASLSLAQQESHNECLSRNAKSCGECIQVGSRCAWCTMSNFTGVG
ESNSARCDYAENLKERKCDERHVESPRGQVRVLRNTPVSDQGTKLPPENITQLAPQHVRL
TLRAGQPQKFNLTFKRAADYPVDLYYLMDLSYSMNDDLENVKKLGTELQQRMKEITSEFR
IGFGSFVDKTVMPYISTTPKKMRNPCSTGPDEVCTEPFSYRNVLPLTNNGSQFNELVSQQ
KISGNLDSPEGGFDAMMQAAVCVNEIKWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDG
NCHLDPQGVYYTKSNYYDYPSVAHLIQKLSENNIQPIFAVTKDFYSVYQELSNLIPKSAV
GELSNTSSNIIQLIIEAYKALSSEVILEHTKPPGGVSVSYTSHCKDGSVQTGDDGNKCSN
IQIGDEVTFSIEVAATGCPNDGKETQIQLRSLGFNEKVLVSLRFVCECECHSTGIANSAD
CNHGNGTLECGACRCNEGRIGRLCECSTDEVNSEDIWASCKRDNSSAVVCSGRGDCVCGE
CVCNKRDNANELVSGPLCECDNFSCDRSGGVMCGGHGKCECGKCVCESNFTGNACDCPTS
KKACQASNGQECNGRGQCVCGDCKCNDSKYQGATCEVCPTCPGACDEHKDCVQCKVFKKG
PKAAVCEERCRTLNVVSMAQLKQPGELDSLMHCKAKDEDDCWFFFTFTLDKLGSPLVEVQ
EKRECPTEPNILAIIAGVVAGIVLIGLALLLIWKMLMTIHDRREFAKFEKEKANAKWDSG
ENPIYRSAVTTVVNPKYEGK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgcgattgctgctgaggacggcgctggctgtcacgctgctcgccagcctctcc
ctcgctcagcaagaatcccacaacgagtgtctgtcgcgtaacgccaagtcgtgcggggag
tgcatccaggtcggcagccgctgcgcctggtgcacgatgtccaacttcacgggcgtcggg
gagtcgaactcggcacgctgcgattacgcggagaacctaaaggagcgcaagtgcgacgag
cggcacgtggagagccccaggggccaggtgcgcgtgctgcgcaacacgcccgtcagcgac
cagggcacgaagctgccgcccgagaacatcacccagctcgcgccgcagcacgtccggctc
acgctccgagcaggccagccgcagaaattcaacctgacgttcaagagggcggccgactac
ccggtggacctctactacctgatggacctctcctactccatgaacgacgacttggagaac
gtcaagaagctgggcacggagctgcagcagcgcatgaaggagatcacgagcgagttccgc
atcggcttcggctcgttcgtggacaagacggtgatgccgtacatcagcacgacgcccaag
aagatgcgcaacccgtgcagcacgggccccgacgaagtgtgcaccgaaccgttcagctac
cgcaacgtgctgccgctcaccaacaacggcagccagttcaacgagctcgtgagccagcag
aagatctcgggcaaccttgactcgcccgagggcggcttcgacgccatgatgcaggccgcc
gtctgcgtgaacgagatcaagtggcggaacgtgacgcgactgctcgtcttctccacggac
gccggcttccactttgcgggcgacgggaagctggggggcatcgttctgcccaacgacggg
aactgccatctggacccgcagggcgtctactacaccaagagcaactactacgactacccg
tcggtggcgcacctcatccagaagctcagcgagaacaacatccagcccatcttcgcagtc
accaaagacttctacagcgtctaccaggagctgagcaacctcatcccaaagtcggctgtg
ggggagctctccaacacgtcatccaacatcatccagctcatcatcgaggcctacaaggcg
ctctcctcggaggtgatcctggagcacacgaagccgccgggcggcgtctccgtgagctac
acgagccactgcaaggacggcagcgtgcagacgggggatgacggcaacaagtgctccaac
atccagatcggggacgaggtgacgttcagcatcgaggtggcggccacgggctgccctaac
gatgggaaggagacgcagatccagctgcgctcgctgggcttcaacgagaaggtgttggtg
tcgctgcgcttcgtgtgcgagtgcgagtgccactccaccggcatcgccaacagcgccgac
tgcaaccacggcaacggcacgctggagtgtggcgcctgcaggtgcaacgagggccgcatc
gggcgtctgtgcgagtgcagcacggacgaggtgaactcggaggacatctgggcgtcgtgc
aagcgcgacaactcgtcggcggtggtgtgcagcgggcgcggcgactgcgtgtgcggcgag
tgcgtgtgcaacaaacgcgacaacgccaacgagctggtgtccggcccgctctgcgagtgc
gacaacttctcctgcgaccgctccggcggcgtcatgtgcggagggcacggcaagtgcgag
tgcggcaagtgcgtgtgtgagagcaacttcacgggcaacgcgtgcgactgcccgaccagc
aagaaggcgtgccaggcgagcaacgggcaggagtgcaacgggcgcgggcagtgcgtgtgc
ggggattgcaagtgcaacgacagcaagtaccagggcgccacctgcgaggtctgccccacc
tgccccggcgcctgcgacgagcacaaggactgcgtgcagtgcaaggtgttcaagaagggg
ccgaaggcggcggtctgcgaagagcggtgccgcaccctgaacgtggtgtccatggctcag
ctgaagcagcccggggagctggactcgctgatgcactgcaaggcgaaggacgaggacgac
tgctggttcttcttcacgttcacgctcgacaagcttgggagtccgctcgtcgaggtgcag
gagaagagagagtgccccacggagccgaacatcttggcgatcatcgcgggcgtggtggcg
ggcatcgtgctcatcggcctcgcactgctgctaatctggaagatgctcatgacgatccac
gaccggcgggagttcgccaagttcgagaaggagaaggccaacgccaagtgggactcggga
gaaaatccgatctacaggagcgccgtgaccaccgtggtgaaccccaagtacgaagggaag
tga
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integrated database retrieval system
