Lethenteron reissneri (Far Eastern brook lamprey): 133358344
Help
Entry
133358344 CDS
T09663
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133358344 (DDX18)
03009 Ribosome biogenesis [BR:
lrj03009
]
133358344 (DDX18)
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133358344 (DDX18)
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133358344 (DDX18)
Ribosome biogenesis [BR:
lrj03009
]
Eukaryotic type
90S particles
Helicases
133358344 (DDX18)
Pre-60S particles
133358344 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
AAA_30
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
133358344
NCBI-ProteinID:
XP_061432604
LinkDB
All DBs
Position
61:complement(6166682..6178646)
Genome browser
AA seq
670 aa
AA seq
DB search
MADLSMKILRKRLAKKNSKLRSTGKAAPVPRPAPVQEEVEEGGAATDAAKEEERVAPDVG
NASPSAPAENGSQEAQGKKRRKRKKKQPTGNDADGTESKRPRGEEVEADGENQEQTDDEK
RSGEGTDGETKDGDNDDDGPALPIGTTGAFEDMSFSSLAGLVSEYTLKAVAEMEFTTMTE
IQHKSIRPLLEGRDILAAAQTGSGKTLAFLIPAIELIYKIKFMPRNGTGVLVLSPTRELA
MQTYGVLRELMKHHVHTYGLVMGGSNRTAEAQKLAKGINILVATPGRLLDHMQNTNTFMY
KNLQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAKISLKKEPL
YVGVDDHKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKIMVFFSSCMSVKFHYEL
FNYIDLPVMGIHGKQKQTKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQFDPPD
DPKEYIHRVGRTARGIGGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKIADIQSQ
MEKLIEKNYYLHKSAQEAYKAYVRAYDSHSLKQIYNVSTLDLQKAALSFGFRVPPFVDLN
VHSSKGKGLQKRGGGGGFGFGHQKSWHDYGAKTYKHVGRAGGAVGKAGKAGKTGKTSGAV
GKPDRRQFTR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgagtatgaagattctgcgcaagcggctcgcgaaaaagaacagcaaactc
cggagcactggcaaagccgcgccagtgcccaggcctgcaccggtccaggaggaggtggaa
gaaggaggagcagcaacagacgcagcgaaggaggaggagagggtggccccagacgttggg
aacgcgagcccctcggcccccgcagagaacgggagccaggaagcgcaggggaagaagcga
cggaagagaaagaagaagcaaccaacgggcaacgacgcggatggcactgagagcaagagg
ccgcgcggcgaggaagtcgaggccgacggggagaaccaagagcagacggacgacgagaag
cggagtggagagggaacggacggggagacgaaggacggtgacaacgatgacgatggaccc
gccctgcccatcggcaccaccggtgcgtttgaggacatgtcgttttcgtcgctggcgggg
ctggtgtccgagtacacgctgaaggccgtggccgagatggagtttaccaccatgacggag
atccagcacaagagcatccgccctctgctcgagggccgggacatcctggcggcggcacaa
acggggagcggcaagacgctggcgttcctcatcccggccatcgagctcatctacaaaatc
aagttcatgcctcgcaacggtacgggcgtgctcgtgttgtcgccgacacgggagctcgcc
atgcagacgtacggcgtgctgcgcgagctcatgaagcaccacgtgcacacttacggcctc
gtcatgggcggcagcaaccgcaccgccgaggcgcagaagctcgccaagggcatcaacatc
ctggtggccacaccgggccgtctgctcgatcacatgcagaacacgaacacgttcatgtac
aagaacctgcagtgcctggtgatcgacgaggctgaccgcatcctggaggtcggcttcgag
gaggagatcaagcagatcatccgcctgctgcccaagaaacggcagacgatgctgttttcg
gcgacacagacgcgaaagatcgaggatctggccaagatctcgctgaagaaggagccgttg
tacgttggcgtggacgaccacaaagaaaccgccaccgtggacggcctggagcagggctac
gtggtgtgcccatcggagaagcgcttcctgctgctcttcaccttcctcaagaagaaccgc
aagaagaagatcatggtgttcttctcctcctgcatgtccgtcaagttccactacgagctc
ttcaactacatcgacctccccgtcatgggcatccacggcaagcagaagcagacaaagcgc
acgacaacgttcttccagttctgcaacgccgactcggggacgctgctctgcaccgacgtg
gcggcacgcggcctcgacatccccgaggtcgactggatcgtccagtttgacccccccgat
gaccccaaggagtacatccaccgcgtgggccgtacagcgcgcggtatcggaggccgaggc
cacgcgctgctcatcctgcgccccgaggagctcggattcctgcgctacctcaagcaggcg
cgggtgccgctcagcgagttcgagttctcctggtccaagatcgccgacatccagtcccag
atggagaagctgatagagaagaactactacctgcacaagtctgcgcaggaggcctacaaa
gcctacgtgcgggcctacgactctcactcgctcaagcagatctacaacgtctccacgctg
gacctgcagaaggccgcgctgtccttcgggttccgcgtgccgcccttcgtcgacctcaac
gtgcacagcagcaagggcaagggcctgcagaagcgcggaggtggcggtggtttcggcttc
ggccaccagaagagctggcacgactacggcgccaagacctacaagcacgtgggcagggcc
ggcggagccgtgggcaaggccggcaaggccggcaagaccggcaagaccagcggcgccgtg
ggcaaacccgaccggcgccagttcacccgatga
DBGET
integrated database retrieval system
