Lethenteron reissneri (Far Eastern brook lamprey): 133358425
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Entry
133358425 CDS
T09663
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133358425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrj03041
]
133358425
Spliceosome [BR:
lrj03041
]
Complex A
U1 snRNP components
U1 related factors
133358425
Complex B
133358425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
ALN_composite
Motif
Other DBs
NCBI-GeneID:
133358425
NCBI-ProteinID:
XP_061432722
LinkDB
All DBs
Position
7:complement(13468237..13505466)
Genome browser
AA seq
962 aa
AA seq
DB search
MANQDGNNAPGSASGPGQQHPAFSNPPPMVPPPFMPPPGIPPFPPMGMPPMGQRPPNMPP
MPPGMMPPMMPPIGGPPPMGQMPGMMPPMMMMQGMPNIPPIAAAGSVTPTDTSTGPGAPA
GQAVNPAVAAIQQSASAGNSPAQQETQKKKSLWTEHKSPDGRTYFYNSDTKQSTWEKPLE
LKSPGEMLVASCPWKEYKSDTGKPYFYNAQTKESRWTKPKELEDLENMIKAHEDSGGQME
LPVPAAVTTVQAASGTPGSTGTSSPVENGASPSAAGTTSALPSSADGTPQQDGVSLAAGV
AVTATASANAVAMGNATTTVPPVMGTVIGAPTGMVAVMPGEVIPGAEAIAEQVIGSVVKE
DGKKKKEKKVYTWNTKEEARQAFKDLLKDKKVPASASWEQAMKMIINDPRYSALPKLSEK
KQAYNAYKTQRDKEEKEEARLKAKEAKDRLQRFLETHEKLNSYVKYRKAEQMFGSMEVWN
NVQERDRNEIYEDVIFFLAKKEKEEAKRLRKRNIQALKSILDSMTSVTFRTTWSEAQQHL
MDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEDKEKGRLRERRMQRKNRELFQLF
LDELHNNGKLHSMSTWMDLYPAVSADIRFSRMLGQPGSTPLDLFKFYVEDLKARYHEEKK
IIKDVLKDKNFMVEVKTTFEEFASLISSDKRAVTLDAGNVKLAFNSLIEKAEAREKEREK
EEARKQKRKEAAFRNMLKQATPPLEHDSKWDDVRDRFVNDSAFDQITVESERIRLFKEYV
GALEVECQHYHPKHSRKHSKKSKKHRKRSRSRSGSESEEDDHHHRVKKKKRSRSKSASER
SSSAESGEYRSSKKSKKHKKKNKKRRHRSNSVESEEVREKERDRRDKDKDKDKDKERHRE
KERTDSHKSPKRSGSKKDKTGWDTSESELSEGELEKRRRVLLQQLADDARRKRDTTGTGR
DA
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaggacggtaacaacgcgcctgggtcggctagtggacctgggcaacagcat
cctgctttctctaaccctcctcccatggtaccgccaccctttatgccacctccggggatt
cctcccttccctccgatgggcatgccaccgatgggacaacggccccccaatatgcctccc
atgccacctggcatgatgcctcctatgatgccacccattggagggcccccacctatgggc
cagatgcctggtatgatgccgcctatgatgatgatgcagggaatgccaaacattcctccc
attgcagctgcggggtctgtaacacccactgatacaagtactggaccgggtgctccagct
ggccaggctgtgaaccctgcagtagctgcaatacagcagtctgcatctgcaggaaactct
ccagcacagcaagagactcaaaaaaagaaatcattatggacagagcacaagtctccagat
ggacggacctatttctacaacagcgacaccaaacagtccacctgggagaagcccctagaa
ctcaaatcccctggagagatgctggtggcctcatgtccttggaaggaatataagtctgac
acaggcaagccttacttttacaatgctcagacgaaagaatctcgctggaccaaacccaag
gaacttgaagacctggaaaatatgataaaggcccatgaagattctggggggcagatggag
ctgcccgttccagcggctgtcacgactgtgcaggcggccagcggcacacccggctccacg
ggcacaagctcccctgtggagaatggtgcatccccctccgcggccggaaccacatctgcc
ctgccgtcctccgcagatggcacgccacagcaagatggtgtttctctcgctgctggcgtc
gcagtcacagccactgcttctgccaatgccgttgccatggggaatgccaccacaactgtt
ccccctgtcatgggaacagttattggagcgccgactggaatggtcgccgtaatgcctggt
gaagtcattccaggcgcagaagctattgccgagcaagtgattggcagtgttgtgaaagag
gatggcaagaagaaaaaggagaagaaagtctacacctggaacactaaagaagaggcgagg
caggcctttaaggatcttctgaaagacaagaaagttcctgcaagtgcatcatgggagcaa
gccatgaaaatgatcatcaatgatcccagatatagcgccctgcctaagctgagcgagaag
aagcaggcatacaacgcatacaagacccagcgagacaaggaggagaaagaggaagcgcgg
ctcaaggccaaggaggccaaggatcggttgcagcgtttccttgagacgcatgagaagctc
aactcgtatgtgaaatacaggaaggcagagcagatgttcgggagcatggaggtgtggaac
aatgtacaggagcgggatcgcaacgagatttatgaggatgtgatcttcttcctggccaag
aaggagaaggaggaggccaagcgtctacgtaagaggaacatccaggcactcaagagcatc
cttgacagcatgacaagcgtcacattccgcaccacctggtccgaggcgcagcagcacctt
atggacaaccccacattcgcggaggacgaggagttgcaaaatatggacaaggaagatgca
ctgatatgctttgaggagcacatccgtgcactggagaaagaggaagaggaggataaagaa
aaaggccgactgagagagcgccgcatgcagcgcaaaaaccgtgaactgttccagctgttt
ttggatgagttgcacaacaatgggaagctgcactccatgtctacatggatggatctgtac
ccggccgtcagtgcagacattcgcttttccaggatgctggggcagccaggttctacacca
ctggatttgttcaaattctacgtggaggacctcaaagctcgctaccacgaggagaagaaa
ataatcaaggatgtgctcaaggacaagaacttcatggttgaggtgaaaacgacgtttgag
gagtttgcgtccctcatcagctctgacaagcgtgctgtaacattggacgcaggaaacgtg
aagctcgcgttcaacagtctgattgagaaagcggaggcacgtgagaaagaacgcgagaag
gaggaggcccgcaaacagaaaagaaaggaggctgcattccgcaacatgctgaagcaggcg
acccctcctctggaacacgactccaagtgggatgacgtgcgagaccgcttcgtcaatgac
tcagcctttgaccagatcactgtagagtcggagcgcatccgcctcttcaaggagtacgtg
ggtgccctggaggtggagtgccaacactaccaccccaaacacagccgaaagcactcaaag
aaatctaagaaacatcggaagcgctctcgttcccgctcgggatctgagtcagaagaagac
gatcatcaccaccgcgtgaaaaagaagaagcgatctcgttccaagtctgcatccgagcgc
tcaagcagcgctgaatctggtgaataccgcagctcaaagaaatcaaagaaacataagaag
aagaacaaaaagagaagacacagatcaaactcggtcgagtcagaggaagtgagggaaaag
gagagggaccggcgggataaggacaaggacaaagacaaggataaggagaggcatcgtgag
aaggaacgcacagactcgcacaaatccccaaagcgctctggcagcaaaaaggacaagacg
gggtgggacacctcggagagtgagctgagcgagggggagctcgagaagcggcgtagggtc
ctgctgcagcagctcgccgatgatgcgaggcgcaagcgcgacaccacggggacggggcgc
gatgcgtga
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