Lethenteron reissneri (Far Eastern brook lamprey): 133358503
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Entry
133358503 CDS
T09663
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03266
Virion - Herpesvirus
lrj04514
Cell adhesion molecule (CAM) interaction
lrj04517
IgSF CAM signaling
lrj04520
Adherens junction
lrj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
133358503
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133358503
04517 IgSF CAM signaling
133358503
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133358503
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133358503
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133358503
04090 CD molecules [BR:
lrj04090
]
133358503
Cell adhesion molecules [BR:
lrj04515
]
Immunoglobulin superfamily
Nectin family
133358503
CD molecules [BR:
lrj04090
]
Proteins
133358503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
Ig_2
C2-set_2
I-set
ig
Ig_5
Ig_4
Ig_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
133358503
NCBI-ProteinID:
XP_061432841
LinkDB
All DBs
Position
62:complement(5441791..5474545)
Genome browser
AA seq
477 aa
AA seq
DB search
MDTLCFAQRVMIAVHLLLLLPATLGAQSVTSEIEHDSEASGGSGGDVKLRCVYTGSETVI
QIGWVKETTQEPVYIASRQNDQSEINDKLKGRLTFLGHGNNNATISIRALRASDSGSYIC
TFTTTTKGTKEVKINLIVVVTPEVTLVLGPAPLVSGRGASQLAATCVAANGNPAAKIAWT
LKNVSGSHFVFEALKDDAGTIIDHKNSSISVTRELRLEPTKEMNKASLACVVTQSGNVNQ
IEKIVALNVHYKPKVTTISGVTGPMQEGSTKVTLTCLADANPSAKYSWMRNGTHMNGSDH
STLTLDRAVSNSGMYRCIAVNDVGTDFGDIDVNITYAPAQPTTVPTTMPGTGSRVNGGPG
SLVWIGVGLGVLIIVMGIAVGVCVIMKKRMRKSANGLGDVQLSRNTENKPLAAASLSAHC
YDVVTPAASCAKKLTVETEITYAELDRTALHRGQRPAQHQPQVQQDSTIYAHIVHGR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggacacactctgctttgcgcagcgcgtgatgatagcagtccatctgctgctcctcctg
cctgcaactctgggtgcccagagtgttacatcggagatcgaacacgacagtgaagcgtct
ggtgggagcggaggagacgtgaagctgcgctgcgtctacacgggaagcgagaccgtcatc
cagataggatgggtaaaggaaacaactcaggagcctgtgtacatagcaagtcgccagaat
gatcaaagtgaaataaatgataagttaaaagggcgcctgactttccttggccacggaaac
aacaatgccaccatctcaatccgcgcgctgcgcgcctcggacagcggctcctacatctgc
acattcacgacaacaacaaaagggactaaggaggtgaagatcaacctcatcgtggtcgtg
acaccagaggtgacgttggtgttgggcccggctcccctggtgtctggtcgcggggcatct
cagctggcggcgacgtgcgtagcggccaacgggaaccccgcggcgaagatagcctggact
ctgaagaacgtctcgggaagccactttgtctttgaagccctgaaggatgacgcgggcacc
atcatcgatcacaaaaatagctccatcagcgtgacgcgggagctgcggttggagccgacg
aaggagatgaacaaagcgtcgctcgcgtgcgtcgtgacgcagtccgggaacgtcaatcag
atcgagaagatcgtcgctctcaatgtgcactacaagccgaaggtgacgacgatcagtgga
gtcactggccccatgcaagagggaagcaccaaggtcactctcacctgtcttgccgacgcc
aatcccagcgccaagtactcgtggatgaggaatggtacacatatgaatggctctgaccac
agcacgctgactctagatcgtgctgtgagtaactccgggatgtaccggtgcattgctgta
aacgacgtgggcacggactttggcgacatcgacgtcaacatcacctatgcgcccgctcag
cccaccaccgtgccaaccaccatgccaggcacaggttccagagtaaacggtggaccagga
tctctcgtttggataggggtcggacttggagtgctgatcatcgtcatgggcatcgccgtc
ggggtctgtgtcatcatgaagaagaggatgaggaagagcgcgaatgggctgggcgacgtc
caattatcgcgaaacacggagaacaagccgctggcagcggcatcgcttagcgctcactgt
tatgacgtcgtgacgcccgcggcctcttgcgccaagaagctgaccgtggagacagaaatc
acttacgccgagttggaccggacagccctgcatcgcggtcagagaccggcccagcatcag
cctcaagtccagcaggacagcaccatctatgctcacatcgtgcacggacgctga
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