Lethenteron reissneri (Far Eastern brook lamprey): 133358567
Help
Entry
133358567 CDS
T09663
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133358567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrj03021
]
133358567
03036 Chromosome and associated proteins [BR:
lrj03036
]
133358567
Transcription machinery [BR:
lrj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133358567
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133358567
PBAF complex
133358567
GBAF(ncBAF) complex
133358567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
SpeFL
Motif
Other DBs
NCBI-GeneID:
133358567
NCBI-ProteinID:
XP_061432920
LinkDB
All DBs
Position
62:2885..56946
Genome browser
AA seq
609 aa
AA seq
DB search
MGEPLGKRHGRKDEEEEEEDLTKDMEEPLHVPNMTEVQLPKNVYTKKDTEVAPIKGGVMT
DLDEQEDENTDLGAKDAAGKALWSEDDEMGPAMRLELGEDGAAEQQTHHIIIPSYTSWFE
YNSIHAIERRALPEFFNSKTKSKTAEIYLAYRNFMIDTYRLNPQEYLSGMVCRRSLAGDV
CAIIRVHAFLEQWGLINYQVDPDSKPSPTGPPPTAHFHVLADVPNGMAPMKPRGPQGPAS
QVMLTLVDRGRDKPAEVQSFGLRTDIYSKKNVSAKSKAAASASREWLDHETLLLLEALDL
YTDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEESEASMGPLAYQPVPFSRSGNPIMS
TVAFLASVVDPRVASAAAKAALEEFSHRRVLLPPDLARVDDKKEEIILKQEQQQHKTSTD
DSKLGIGNNEDEKSKEGATTEFGVLKVEAGNREETREEQGEEQENMSSRSKAETPAEALG
LSSLPDASITATAAAAALIAAAAKAKQLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDRERESLEYQRQQLLSDRSTFHLEQIKLAELRARQLQQQQLQQQQQTCGQTGEHI
GAVHTQDQP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagccattaggaaagaggcatgggcgcaaggacgaggaggaagaggaggaggac
cttacgaaagacatggaggagcctctacacgtgcccaacatgaccgaggttcagctgccc
aagaatgtttatacaaagaaagacacagaagtggctcctattaaaggcggtgtcatgaca
gatttagacgaacaagaagatgaaaatactgatcttggagccaaggacgctgctggaaag
gccctgtggtctgaggatgatgaaatgggcccagcaatgaggcttgagctgggtgaagat
ggtgcagcggagcagcagacgcatcacatcatcattcccagctacacctcttggtttgaa
tacaacagtattcacgcaattgaaaggcgagcactaccggagtttttcaacagcaagaca
aaatcaaaaactgcagaaatctatctggcatacaggaacttcatgattgacacctaccgg
ctcaacccccaggaatatctcagtggaatggtgtgtcggcgaagcctggctggggacgtg
tgtgctattatcagggtgcatgcgtttctggagcagtgggggctcataaactaccaagtg
gacccggacagcaagccttctcctacagggccacctcccaccgctcacttccacgtgctg
gctgatgtacccaatggcatggcaccgatgaagccaagaggccctcagggccctgcctcg
caggtcatgctgaccttggtggaccgcggacgggataagccagcagaagtgcagagtttt
gggctgcgcacagacatatactccaagaagaacgtctctgctaagagcaaggccgcagca
agtgcatcccgcgagtggctggaccatgagacattgcttttgctggaggcactggacctg
tacacggatgactggaacaaagtgtcggagcacgtgggcagccgcactcaagatgagtgc
atccttcacttcctgcggctacccatcgaagacccctacctggaggagtccgaagcatcc
atgggtccgctggcctatcagccggttccattcagccgctcagggaatcctatcatgagc
acggtggcgtttctggcttccgttgtagacccacgcgtggcctccgcagcggccaaggct
gccctggaggagttctcgcacagaagagtcctgctacctcctgatcttgcaagagtggat
gataagaaagaggagatcatactcaaacaggagcagcagcagcacaaaaccagtactgac
gattccaagctcggcattggcaataatgaggatgaaaagagcaaggaaggagcgacgact
gaatttggtgtgctcaaggtggaggctggcaacagggaggagacgagggaggagcaaggt
gaggagcaggaaaatatgtccagcagaagcaaggcggagactcctgcggaagccctaggc
ttgtcgtccttgccagatgccagcatcactgcaacggctgctgctgctgctctcattgca
gctgctgccaaggccaagcaactggcagctgtggaggaacgcaaaatcaagtcactggtg
gcgctgttggtggagacccaaatgaagaagctcgagatcaagctgagacattttgaggag
ctggagaccatcatggaccgtgagcgggagtcgctggaatatcaacggcaacagcttctc
tcggatcgcagcacctttcacttggagcagataaagctggccgagctgcgtgcaaggcaa
ctacagcagcagcaattgcagcagcagcagcagacttgtggacagacaggagagcacatt
ggagcagtgcacactcaagatcaaccgtaa
DBGET
integrated database retrieval system
