Lethenteron reissneri (Far Eastern brook lamprey): 133358841
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Entry
133358841 CDS
T09663
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04010
MAPK signaling pathway
lrj04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133358841
04020 Calcium signaling pathway
133358841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrj04040
]
133358841
Ion channels [BR:
lrj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133358841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
SGT1
Motif
Other DBs
NCBI-GeneID:
133358841
NCBI-ProteinID:
XP_061433273
LinkDB
All DBs
Position
63:7308424..7519350
Genome browser
AA seq
2878 aa
AA seq
DB search
MDDGARPTAAAPAARPTFGRAAAYSTQQPQQQQQQRESTATPGAAHPPAASTAGGPLLPP
PPPPPPPPSSSSTAFVHIYDAGASGRDPAGRAAPNRATSTATPGGGAAGGDGGDGGGGDD
GGDGLEAGKSSATEGLPYPLLAPIAFYVLRQSTRPRCWCLKVVCNPWFERLSMLIILLNC
VTLGMFQPCEDIDCSSDRCKILKRFDDFIFAFFAVEMVIKMLALGVFGKQCYLGDTWNRL
DLFIVVAGMLEYSLDMQNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVL
LLCFFVFFIFGIIGVQLWAGLLRNRCFLANNFTEMFNMTYDPYFIPDDGDESPFLCSLNS
DNGMQRCADIEPSLSPDGAVCSLPALLFLQQQQRDGEAAGAVAAMEQGGQRHHNHHHHHP
PHHGHFHNYDGGGADGMQEAFRDLPRSNSCVNWNQFYSRCGPAQRNPFRGAINFDNIGYA
WIAIFQVITLEGWVDIMYYVMDVHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQ
RECQLMREQRARFLSNDSTLASFSEPGSCYEELLKYVGHVYRKAARQVRRAYREWRRRRR
RRRSFGGGGVANAGSVCAGGEYGTGAEYAGGFCSAAWDRRRGRADGGGAAGATAVAFGRR
RQRPAKESAERKRRRRRKRMRSIHHLIHHHHHHHHHHYHLGSEQQRQKTDKLVVFDSGVG
GGGNANGSSRLLGSELGNLRQACGECGGSSGGGSSSGGSNDGGGSGGSGGGGGGGGGSGG
GSARPSNSLMLPVGPSLQQASSSESVHSVYHADCHLDALPLRHSPVAASPRTESLRSVAR
MSAAAAAAAAAAVAQVQGGGPPGGEAPAAAGGVGACHAVAAVSDGGKEKRVQSAPPPMDP
YTKLQHFVGARSSCCGGGAPPLSVSFSAGAARGDVLPCKLEKCSLCAEAVSAMRRHAQRD
YDDDDDDDDDDDDDDDDDDDDDDDDDLCSDSENDENENCEGYNSDADRDRQEEEEEEDEA
HVAARGGAGVGAGECVYEFTRDVVHSRPHHAGWSLGRCGDRSAWDAAAAAAASAAASAAA
RRQRAQLTQQQQQQQRRKRRRKRRRRGRGEEEDEEEGEGGACRRCLRALAHCLRKIVDSK
YFNRGIMVAILINTLSMGIEYHEQPDELTSALEISNIVFTSLFALEMVLKLLAFGPLGYI
KNPYNIFDGVIVIISVWEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLIKTMD
NVATFCMLLMLFIFIFSILGMHLFGCKFSRHLDNGDTVPDRKNFDSLLWAIVTVFQILTQ
EDWNVVLYNGMASTSPWAALYFIALMTFGNYVLFNLLVAILVEGFQAEKHKSRTCAEGDT
NRSESSFGKGSVSFDDDLGKKSEFPMMTIVTPNGHVDSKCSLGPPIITHTAATPMPTPKG
SPHADGPVSRHGSAASIGPPVHSANPDQKSLVSSFSAGSWSSRRSSWNSLGRASSLIRRG
GGNDANGGERESLLSSSRCGAGGGGGGGAAAAAVTGHNSAAGSGWGSGSDDDGGDDGGGE
ERGGGGGSTTMMVGDVEKQQNHRHHHHHGHQRHHHQQQQQLHHQQRSASVCKEAPRSRRS
ASLCTSPDTPFDPEPMVLVVPSLSLPAGDGPAGAAVGRHARRDSACNGRAARGADGKRAE
EEEEEDEEEYSDESCLSRMRKRLQPLKPRFCAEREDWSLYLFAPRNRFRMLCQKIISHKL
FDHSILAIIFLNCITIALERPDIQDRSMERLLLSISNNVFTVIFTLEMTVKVVALGLFQG
ERAYLQTSWNILDGVLVLVSIVDLLVAHVGGPKILGILRVLRLLRTLRPLRVISRAPGLK
LVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEAPEALRVANRSDCEAHQ
LKWMRYKYNFDNLGQALMSLFVMASRDGWVDIMYNGLDSVGVNQQPRQNHNPWMLLYFIS
FLLIVGFFVLNMFVGVVVENFHKCRQQQEEEETKRREDRRQQRLEKKRRMSLFAAEQSQM
LVRIMANKYLSKEAQRQPYWASYSRPRLLIHKMCTAHYLDLFISIIIGLNVVTMSIEHYA
QPKALDRALKYCNYVFTVVFVLEAVLKLIALGFRRFFKERWNQLDVAIVLLSIMGITLEE
IEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLF
FIYAALGVELFGSLECIKHACEGLGRHATFKNFGMAFLTLFRVSTGDNWNGIMKDTLREC
APEEDGGQEGGGGGESCCCHNTLVSPLYFVTFVLAAQFVLVNVVVAVLMKHLEESNKEAR
EDAELDAQVEMEMEWARYGGDGAESGGIGRDSESGRSFERCSLRQDSPLQRHHTLEKMGF
DNVSLIVQDSMEAELLMMDNISGSVFHHYATPVPEKRANHKHEIPFAEMEAMSVTSDKLS
EKSWSLPLTDDSYPDVGGTRTPQPEGCCAEDASSPCPEAGDAEGGGHLLSVRKVSIGRTH
SLPNDSYMFRPVDSVAGPPLPPDAGGAAVFEPTTPAAAAGPRLPTQQSQAEAASCTFLQL
PPPPPFAAFPAPAHAQAAAGVPRLPPPAPPRSPSSQRLLRRQAAVRMDSIDAPTLGSKDS
LLSATQDSPVHHIPHQQQQPQLPLAPPPPPPPLPSLRPPPTVPRPLPRRAGSGGGGGGGA
AANGAGGRLSREGSDPNDEEVRRITRGSAASSGREVKKCHSVDDRGLLSVAAAAAAAAAA
AGSSAGAAGCWWTDDARRHSIEICPEMQTRADRRGSLAPLEGRRSPRPPPRKEKLSPPCI
SVEPPPSETCGGGNGQGGGRRQPSGHHRRLRHHPSSPPTHPVQRRVVARRRRSLRGVL
NT seq
8637 nt
NT seq
+upstream
nt +downstream
nt
atggacgatggcgctcgccccaccgccgccgctcccgctgctcgcccgaccttcggcaga
gccgccgcgtactccacgcagcaaccgcagcagcagcagcagcagcgggagtccaccgct
acccccggagccgcccacccccccgcggcctccaccgctggcggtccgctgcttccacca
ccaccaccaccaccaccacccccctcctcctcctccaccgccttcgtccacatctacgac
gcgggagcgagcggcagggacccggcggggagggccgcgccgaaccgcgccacctccacg
gccacccccggtggtggagccgccggtggtgacggcggcgatggcggcggcggcgacgac
ggcggcgatggtttggaggccgggaagagctcggccacggagggcctcccctacccgctg
ctggctcccatcgccttctacgtcctgcggcagagcacacggcctcgctgctggtgcctc
aaggtagtgtgcaacccgtggttcgagcgcctcagcatgctcatcatcctgctcaactgc
gtcaccctcggcatgtttcagccctgcgaggacatcgactgctccagcgaccgctgcaag
atcctcaagaggttcgatgacttcatcttcgccttcttcgcggtggagatggtcatcaag
atgctggcgctcggcgtgttcgggaagcagtgctacctgggcgatacgtggaaccgcctc
gacctcttcatcgtcgtggccgggatgttggagtactccctggacatgcagaacgtgagc
ctgtccgcgatccggacggtgcgtgtgctcaggccgctacgcgccatcaaccgcgtcccc
agcatgcgcatcctggtgacgctgctgctcgacacgctgcccatgctgggcaacgtgctg
ctcctctgcttcttcgtcttcttcatcttcggcatcatcggcgtgcagctgtgggccggc
ctgctccgcaaccgctgcttcctggccaacaacttcaccgagatgttcaacatgacctac
gacccgtacttcatcccggacgatggggacgagtcgcccttcctctgctccctcaactcc
gacaacggcatgcagcgctgcgccgacatcgagccgagcctctccccggacggcgccgtc
tgctcgctgccggcgctcctcttcctgcagcagcagcagcgcgacggggaagcggctggg
gcagtggccgcgatggagcaaggcggacagcggcatcacaaccaccaccaccaccacccg
ccgcaccacggccacttccacaactacgacggcggaggggcggacgggatgcaggaggcg
ttccgggacctgccgcgcagcaacagctgcgtcaactggaaccagttctattcacggtgc
ggccccgcgcagcggaaccccttccgcggggccatcaacttcgacaacatcggatacgcc
tggatcgccatcttccaggtgatcacgctggaaggctgggtggacatcatgtactacgtc
atggacgttcactccttctacaacttcatttacttcattctgctcatcatcgtcggctcc
ttcttcatgatcaacctgtgcctggtggtgatcgccacgcagttctccgagaccaagcaa
cgcgagtgccagctgatgcgcgagcagcgcgcccgcttcctttccaacgacagcaccctc
gccagcttctcggagccgggcagctgctacgaggagctgctcaagtacgtgggccacgtg
taccgcaaggcggctcgccaggtccgccgcgcctaccgcgagtggcgccgccgccggaga
cgcaggaggagtttcggcggcggcggcgtcgcgaacgccgggagcgtctgcgccggaggg
gagtacggcaccggcgcggagtacgccggagggttttgctcggcggcgtgggaccggcgg
cgggggagggccgacggcggcggcgcggccggggccaccgccgtggcgttcggccggagg
cggcagaggccggcgaaggagtcggcggagaggaagaggaggcggcggcggaagaggatg
cgctcgatccaccacctgatccatcaccaccaccaccatcaccaccaccactaccacctc
ggctccgagcagcagcggcagaagacggataagctcgtcgtgtttgacagcggcgtcggc
ggcggcggaaacgccaacgggagttcccggctactcgggagcgagttaggaaatttgcgc
caagcgtgcggcgaatgcggcggctccagcggcggcggcagcagcagcggcggaagcaac
gacggcggtggtagcggtggtagcggtggtggcggtggcggcggcggcggtagcgggggc
ggttcggcgcgtccctccaacagcctcatgctgccggtaggcccgagcctgcagcaggcc
tcgagttcggagtcagtgcacagcgtctaccacgcggactgccacctcgacgcgctgcct
ctccgccactcgccggtggcggcctccccacgcaccgagtcgctccgctcggtggcgcgg
atgagcgccgcggccgccgccgcggccgccgcggccgtggctcaggtccagggaggaggc
ccccccggcggagaggcgccggcggcggcggggggcgtcggggcgtgtcacgcggtggcg
gcggtgtctgacggagggaaggagaagagggttcagtcggcgccgccgccgatggatccg
tacacgaagctccagcactttgtgggagctcgcagctcgtgctgcggagggggggcgccc
cccctttcggtgtcgttttccgcaggggcggcgcgtggcgacgtgctgccctgcaagctg
gagaagtgctcgctgtgcgcggaggccgtgtcggccatgcggcggcacgcccagcgggac
tacgacgacgatgacgacgatgacgatgacgacgacgacgacgacgacgatgacgatgac
gacgatgacgacgatgacttgtgttccgattcggaaaacgacgagaatgagaattgcgaa
ggatataattcggatgcggatcgagaccggcaagaagaagaggaggaggaggacgaggcc
catgtcgccgcacgcggcggcgccggcgtaggcgcgggcgagtgcgtgtacgagttcacg
cgcgacgtcgtgcactcgcgcccgcaccacgccggctggagcttggggcgctgcggcgat
cgctcggcgtgggacgcggcggcggccgcggcggcatcggcggcggcgtcggccgcggcg
agacggcagcgggcgcagctgacgcagcagcagcagcagcagcaaaggaggaagcggagg
aggaagaggaggaggcgagggagaggcgaggaggaggatgaggaggagggcgagggcggt
gcctgccggcgctgcctgcgtgccctcgcgcactgcctccgcaagatcgtcgacagcaag
tacttcaaccggggcatcatggtggccatcctcatcaacacgctcagcatgggcatcgag
taccacgagcagccagacgagctgacgagcgcactggagatcagcaacatcgtcttcacg
agcctcttcgcactggagatggtcctcaagctcctggcgttcggtccactggggtacatc
aagaacccctacaacatattcgacggcgtcattgtcatcatcagcgtgtgggagatcgtg
ggccagtcagacggggggctgtcggtgctgcgtacgttccgcttgctgcgggtgctcaag
ctggtgcgcttcatgcccgcgctccggcgccagctcgtggtgctcatcaagacgatggac
aacgtcgccaccttctgcatgctgctcatgctgttcatcttcatcttcagcatcctgggc
atgcacctgtttgggtgcaagttcagccgccacctcgacaacggagacaccgtcccagac
cgcaagaactttgactccctcctgtgggccatcgtcaccgtcttccagatcctcacgcag
gaagactggaacgtggtgctctacaacggcatggcctccacgtcgccctgggccgcgctc
tacttcatcgccctcatgaccttcgggaactacgtcctcttcaacctcctcgtcgccatc
ctcgtggagggcttccaggctgagaaacacaaatcacggacctgtgcggagggcgacacg
aaccgctccgagtcaagcttcgggaagggctccgtgagcttcgacgacgacctggggaag
aagtcggagttccccatgatgacaatcgtgacgcccaacgggcacgtggattccaagtgc
agcctgggcccgccgataatcacccacacggccgccaccccgatgccgacgcccaagggc
tcgccgcatgccgacggccccgtgtcgcggcacggcagcgcggcctccatcgggccgccc
gtccacagcgccaaccccgaccagaagtctctggtcagtagctttagcgccggcagctgg
agcagccgccgctcgagctggaacagcctgggccgcgcatcgagcctcatccggcgcggt
ggcggcaacgacgccaacggcggcgagcgcgagtctctgctctcctcgtcgcgctgcgga
gcggggggaggtgggggagggggggcagcggcggccgccgtcaccggacacaactcggcc
gccggtagcggttggggttcaggctccgacgacgacggcggcgacgacggcggcggggaa
gagagggggggcggtggcggctcgacgacgatgatggtgggggatgtagagaagcagcag
aatcatcgccaccaccaccaccacggtcatcagcgccaccaccaccagcagcagcagcag
cttcaccaccagcagcggagcgcaagcgtctgcaaggaagcgccgcgcagccgtcgcagt
gcgtcgctctgcacgtcgcccgacacgccctttgaccccgagcccatggtgctggtggtg
ccctcgcttagcctgccggcgggggatggaccggcgggggcggcggtggggcgccacgct
cgcagggacagcgcctgcaacgggagggcggcgaggggtgcggacgggaaaagggccgaa
gaggaggaagaggaagatgaagaggagtactcggatgaaagctgtctgagtcggatgagg
aaacgcctgcagcctctgaagccgaggttctgtgcggagcgcgaggactggtcgctctac
ctgttcgctccacgcaacaggtttcgaatgctctgccagaagatcatctcccacaagctg
ttcgaccacagcatcctcgccatcatcttcctcaactgcatcaccatcgcgctggagagg
ccagacatccaggatcgaagcatggagaggctactgctctccatctccaacaacgtcttc
accgtcatcttcacgctggagatgaccgtcaaggtggtggccctgggcctgttccagggt
gagagagcctacctgcagaccagctggaacatcctggacggcgtgctggtcctagtctcc
atcgtggacctcctggtggcccatgtgggaggccccaagatcctgggcatcctccgggtc
ctccgcctcctccggacgctccgcccgctcagggtaattagccgagccccgggtctcaag
ctcgtcgtggagacgctcatctcatcgctcaagcccatcggcaacatcgtcctcatctgc
tgcgccttcttcatcatcttcggcatcctcggcgtccagctcttcaaggggaagttctac
tactgcgaggcgcccgaggccctgcgggtggcgaaccgctccgactgcgaggcgcaccag
ctcaagtggatgcgatacaaatacaacttcgacaacctgggccaggcgctcatgtcgctg
ttcgtgatggcgtcgcgcgacggctgggtggacatcatgtacaacggcctcgactccgtg
ggggtcaaccagcagcccaggcagaaccacaacccctggatgctcctctacttcatctcg
ttcctgctcatcgtcggcttcttcgtgctcaacatgttcgtcggcgtggtggtggagaac
ttccacaagtgccggcagcagcaggaggaagaggagaccaagcggagggaggacaggcgg
cagcagcggctcgagaagaaaaggcgcatgtcgctgtttgcagccgaacaaagccagatg
cttgtgagaattatggcaaataagtatctgagcaaagaggcccagcgccagccgtactgg
gccagctactcacgcccgcgtctgctcatccacaagatgtgcaccgcccactacctggac
ctcttcatctccatcatcatcggcctcaacgtcgtcaccatgtccatcgagcactacgca
cagcccaaggctctggaccgggccctcaagtactgcaactacgtcttcaccgtcgtcttc
gtgctcgaggccgtgctcaagctcatcgccctcggctttcggcggtttttcaaggagagg
tggaaccagctggacgtggccatcgtccttctgtccatcatgggcatcacgctggaggag
attgagatcaacgcctcgctgcccatcaacccgaccatcatccgcatcatgagggtgctg
cgcatcgcccgggtgctcaagctgctgaagatggcgacgggaatgcgagcgctgctcgac
accgtcatgcaagccctgccgcaggtggggaacctgggcctgctcttcatgctgctcttc
ttcatctacgcggcgctgggagtggagctcttcgggagcctggagtgcatcaagcacgcg
tgcgagggcctggggaggcacgcgaccttcaagaactttgggatggccttcctgacgctc
ttccgtgtctccacgggcgacaactggaatgggatcatgaaggacacgctgcgggagtgc
gcgccggaggaggacggcggtcaggagggcggcggcggcggcgagagctgctgctgccac
aacacgctcgtgtcgccgctctacttcgtcacgttcgtgctcgccgcccagttcgtgctc
gtcaacgtcgtggtggccgtcctcatgaagcacctggaggagagcaacaaggaggcgcgc
gaggacgccgagctcgacgcgcaggtggagatggagatggaatgggcgcgctacggcgga
gacggagccgagtccggcggcatcggtcgcgattccgagagcgggcgctcgttcgagagg
tgcagcctgcgccaggactccccgctgcagcgccaccacacgctggagaaaatgggcttc
gacaatgtctcgctcatcgtccaggactcgatggaggcggagctgctgatgatggacaac
atctcgggctccgtgttccaccactacgcgactccggtgcccgagaagcgcgccaaccac
aagcacgagatcccctttgcggagatggaggccatgtctgtgacgtcggataaactctcc
gagaagtcctggtcgctcccgctcactgacgactcctacccagacgtggggggcacacgc
acaccccagcccgagggctgctgcgcggaggacgcctcctccccctgcccggaagcgggc
gacgccgaaggcggcggccacctgctctccgtgcggaaagtgagcatcgggcgcacccac
tcgctccccaacgacagctacatgttccgacccgtcgactccgtcgccggcccgccactg
ccgcccgatgcagggggggcggcggtcttcgagccgacgacaccagcagcagcagcaggc
ccgaggctgccgactcagcagtcgcaggcggaggcggcctcctgcaccttcctccagctg
ccccctcctccgcccttcgccgcctttcccgcgccggcgcacgcgcaggcggcggcgggc
gtgccccggctgcccccgccggcgccccctcgctcccccagctcccagaggctcctgcga
agacaggccgcggtccgaatggactccatagacgccccgacactgggctccaaagacagc
ctcctctccgccactcaagacagccctgtacaccacatccctcatcagcagcagcagcca
caactgccgctggcgccgccgccgccgccaccgccgctcccatctctgcggccgccaccc
accgtgccgaggcctctgccccgacgggccgggagcggcggcggcggcggcggcggcgct
gcggctaacggggcgggggggcggctgagccgggagggctcggaccccaacgacgaggag
gtgaggaggatcacgaggggctcggcggcgtcgtcgggccgcgaggtgaagaagtgccac
agcgtggacgaccgagggctgctctccgtggccgcggccgcggcggccgcagcagcggcg
gccgggtcgagtgccggggcggcgggttgctggtggacggacgacgccaggagacactcc
attgagatctgccccgagatgcaaacgcgagccgaccgtcgcggttccctggcccccctt
gagggcagacgctccccgcgcccccccccacgcaaagaaaaactcagccccccctgcatc
tccgtcgagcctccgccgtcggaaacctgcggcggcggtaacggccagggcggcggcagg
cggcagccctccggccaccatcgccggctgcgccaccacccctcgtctccgccgacgcac
cccgtgcagcgccgagtcgtcgcaagacggcggcggagcctccgaggagtcctgtag
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