Lethenteron reissneri (Far Eastern brook lamprey): 133359159
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Entry
133359159 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lrj00535
]
133359159
04091 Lectins [BR:
lrj04091
]
133359159
Proteoglycans [BR:
lrj00535
]
Cell surface proteoglycans
Others
133359159
Lectins [BR:
lrj04091
]
C-Type lectins
Others
133359159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DAG1
T6PP_N
Motif
Other DBs
NCBI-GeneID:
133359159
NCBI-ProteinID:
XP_061433546
LinkDB
All DBs
Position
64:complement(1545072..1614372)
Genome browser
AA seq
2483 aa
AA seq
DB search
MGPGSPLLLLLLLLMLCASVAVSLQASFYGASYVELPLADATNNNEIYIRFKTARRNGLL
LAIGGQTDYILVELRSARLQVRMDLGSGEVILLSQPGLRLNNFLWHDLQLTQERERLVLT
IDELFPLSLRLPGTRFELNVHHGVFLGGGAARLEQHPYMAGVSPGFRGCISDAVYNQHDL
LSVLAGEAEETDLVHEVTQGCSDEFSAFEEDPIHFLNPRSYVAFDTWSAREVGVFECVLQ
TVHPQGVLLYHSNRQTDFIAMEIVDGYVQALIDKGNRIRKVTSSVKVDDGQWYKIKLNLT
IAELQLTVGAETVKTSLGHKRKYLDLTGLMFVGGVEDINMEEILTRGIVSLSRPGGHGSS
FQGCMRDVRINLQKQSLQDALVTREISITCGEELDEEDLSIDTPDLLLISPSPAANLHGN
DDDDEDDEVDEMNEMQNSDAIIVLQTLVVQEGGENILNPDNMNITVDLNNVGLRQSQILF
RITKEPRHGLLKLDIPGANERRAFTLLDIGHRHVIYVHDGSESHSDRFKFRILIHNKKEL
PMLTTKEKEYTFRISIMPVNDPPKLNFPNGDLFMLLENTRRQITENIMEVSDVDSDASNS
FIHVTDGLSSSTGFFSYRDSPRINITTFRYSEVQKGVVYYAHRGERSTRLELQASDRDRR
RGKPIWLRVMAVPVELSVVNNTGLLVNQGDAAILTAANLSVHTNADKQLVDIWFTVTEGC
RYGRLQKRYLGREWRPSHNFTQHDLQQAQIRYESTDTSYHFQNITDSFKFTVTIGEFTTD
EHEFILNISCGTIKLIRHETLTIASDRRGDITNDHVLAAVGDGRPPASLFVYTVLTLPTR
GRLLSSRNGLELDSTFTQLDVELNRVSYELFGRARSDQEDSFQFKVSAGHNRSPRYTFRI
KIERDPLSVILTNVGLSVEEGRSVPITSQGLFARSKVTDVYRFHVVGGPHHGALLRNDTA
ASTRLENVTHFTNQDILNKRVVYVHDDSETEKDQFVIVASPMGNKRVSDALLVYNDSDVA
QLRSEVDINVRPINDQRPVRVVDKAFHVVRSGKRLLTTADVCYHDPDWDFQDSNLVYKQQ
GTFSGQLVSVNDSAHNLTEFKQQDLENGLVLFVHHGGDASHLALMVSDGLHRVSGLLEIR
ASEAFLRVTSPISVLVTQGQSCTLTALHLGVFTNMDIRHENEIQYRVATPPMHGQLIIGE
VASDFFTQSDVTRGRVVYEHANGSVPRDVIGLHVAAHGLETRAELAVRVRLAAHGTAPVL
VHNSSSGGGVLVERGGVVRITDSALLVSHEASLPSEITFTVIRPPKHGFLKKRDVTVPKS
PTRKAEGLVSFTQQEINEEMIEYLHTELPATEDSFTVDSSNGFMELRGVDMCISVIPSEI
ELTIQNLTVAEGGLAVLTQDDISSTNPLFDRLRLHYVIVEQPKHGHIQNARKPDMRLAGF
YGWEVAQGLMEYAHDGSETAGDSLVLMANDSHLHKHSRPLTLPILVVPVNDEAPAIIVNN
VLKVWFGSVTPITTAELSAQDLDSLPEDVLFTISPPSSGYVALAASPSRPVLNFTQADVL
RGRVLYAHRDSMEVEFAFHVSDGQHRSPTEVFLIAAQRLIITLHGSRVLQLYPGATRTIG
SQELRASTNDEDPLRHRRVLYSVSRGPRMGALVRADAPHNPIYNFTQEEVCQGLVAYKHG
GFSDPRWEAEDDFEFTALSPPARPEKQNLHFSISYRHTDSEHRSRLLANTGANVTQGGSV
TIDKTNLDASNVLTKFPPDERLDYEVTFYVTRLPKFGQLSVGARNISQSRPSFSQLDVER
HGLRYTQDTRALLGDGGAAASLNFKRKEPGAVAFRGNARIAGDSAANTGSDLRHAKMHKE
MELKFWTDSFNFSVRLTPRDDQAKESEDISVIAGETFIVRIFPLNIHPPVFQMQQPTLQV
VLGQATLITSSHLLTTDKDNHAQDLVYTLITPPTNGWLAFADNATASVQQFTQEDIDTMQ
LVFVQSGGLRSPGGFDVSISDGKHPPLTQRIVVEVVLPSISLSNNTNITILQGQTSVNVT
NAMLAAVTNVRNVALRYHITKPPTHGILMKRGKSVDTFEQEDIDGMHLMYTMVDLTSPND
SFVFDVHSNNVSISGQAVNILVHPLVKIGQRLQISPGSEVQLGEDHLDCSPLALLTQSSP
TFRIIKHPQHGQLLWKNTTLRAPRETDISPVASGDRRARSRTAGTRMNRRAEQVSTFTQD
DLHRGRVLLKVAESNVILIDNMTVDYFQYELSAQGVQPAIGQFVYEILFPNRDPFSSVLT
AQMFFPFNDSNSAEINITHLVEGYIMNGVATEQDLTMPTFSVDLENPVPGTFHNYYGISE
KTLYYIILPTLIVIAMLVIAIIVMITYKKKRAKGLGQNFSCGFKVGRMERSPAVPSVTVT
PLDPGPAEVYLYEPVPDSCIDDAALRAHSPEATQGPAPGDDDSPEDGDTDISAAPCDWSL
MDPELLQHYRTSSPVLKENQYWV
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atggggccgggctcgccgctgctgctgctgctcctgctgctgatgctgtgcgcgtccgtg
gccgtgtctctgcaagcatcattttatggggccagctacgtagagctgccactggcagat
gcaacgaacaacaatgagatctacatccgcttcaagaccgccaggcgcaatgggctgctg
cttgcaatcggcgggcagactgactacatcctggtggagctgcggtcggcccgcctgcag
gttcggatggatttgggttccggggaggtgatcctgctttctcagccaggcctacgtctc
aacaacttcctgtggcatgacctgcaactcacccaggaacgcgagaggctcgtcctcacc
attgacgagctctttccgctgtcgctgcgcttgccaggaactcgtttcgagctcaacgtg
catcacggagtcttcctgggggggggcgcggcccggctggagcagcacccctacatggcg
ggggtctctcccgggtttcgtggatgcatttctgatgcggtctataaccaacacgacctc
ctttcggtgctcgccggtgaggctgaagagacggacctggtccacgaggtcacgcagggc
tgcagcgatgaattttctgcctttgaagaggatcccattcacttcctgaatcctaggtca
tatgtggcatttgatacatggtcagcccgggaggtgggggtatttgaatgtgtgctgcaa
actgtgcatccgcaaggagtgctgctctaccacagcaacaggcagactgacttcattgcc
atggagatagtggatggctatgtccaagccctcattgacaaaggaaatagaattaggaaa
gttacatcaagcgtgaaggttgacgatggacagtggtataaaattaaactaaacttgaca
atagctgaattgcaactcaccgttggagctgaaactgtaaagacctcccttggtcacaaa
cggaaatatttggacctcactggtctaatgtttgtaggaggagtggaggatatcaacatg
gaggaaattttgactcggggaattgtgtctctgtcaaggccgggcggacatggaagctcc
tttcagggttgtatgcgagatgtgaggatcaacctacagaagcagagtctccaggatgct
ttagtcactcgagaaatatctataacttgtggagaagagctggacgaagaggatctttca
atagacaccccagatttattgttgattagtccgtctcctgcagctaatctgcatggaaat
gatgacgatgatgaggatgatgaagttgatgaaatgaatgagatgcagaacagtgatgcc
ataatagtcttacaaacattagtagtgcaggaaggtggagaaaacatattgaatccagac
aatatgaacatcactgtggacttaaacaatgtgggactccgacagtcccagatattgttc
aggatcaccaaagagccacggcacggtctccttaaactcgatatcccaggagccaatgag
aggagggcattcactcttcttgatattggacacagacacgtcatttacgtccacgatggc
tccgaatcccattcggacagatttaaattccgtatcctcatccacaacaaaaaggagctg
cctatgttgacgacgaaggaaaaggagtacacctttaggatttccataatgccagtcaat
gatcctccaaagttgaactttccaaatggtgacttgttcatgttgttagaaaacacaaga
cgtcagatcacagagaatatcatggaagtgtctgatgtggattccgatgcgagtaattcc
tttatccacgtgaccgatggcttgagctcaagcactggcttcttctcgtatcgggactcc
cctcgtataaatatcacgacgttccgctactcggaggttcagaagggcgtcgtttattac
gcgcaccgaggggagcgcagcacccggttggagctgcaggccagcgatagagatcgccgg
agggggaagcccatctggctcagggttatggccgttcctgttgagctcagcgttgtgaac
aacacaggtctgctggtaaaccagggcgacgcagccattctgacggccgcaaacctctcg
gtgcacacaaacgctgacaaacagctggttgatatttggtttacagttaccgaagggtgt
cgttacgggagactacaaaagcggtatttgggcagagaatggagaccatctcacaatttc
actcaacacgatctgcagcaagcacaaattcgatacgagagcacggacacatcataccac
tttcaaaacattacagacagctttaaatttactgttaccattggagagttcacaacagac
gaacacgaatttatattaaatatttcatgtggcaccatcaaactgattagacacgagact
ctaactattgcaagcgataggagaggagacatcacaaatgatcacgttctggcggcagta
ggcgatgggcgtcctccagcctccctgtttgtgtacacagttcttactctgccgacgagg
ggccgattgctttcctctcgaaacggcctcgagctcgattccactttcactcagctggac
gttgagctgaacagagtttcctatgaactttttggtagagcgaggagcgatcaggaggat
agctttcagtttaaagttagtgccggtcataatcggtccccacgatatacgtttcgtatt
aaaattgagcgggatcctttgagtgtcattttgacgaatgtgggtctaagcgtcgaggaa
ggacggagcgtgccgattaccagccaagggctctttgctcgatccaaggtcaccgacgtg
taccgcttccatgtcgtgggcggtccacaccatggggcgctgctgagaaacgacactgct
gcctccactcggctggagaatgtcacacactttacaaaccaagacatactgaacaagcgg
gttgtctatgtgcacgacgactcggaaactgaaaaagatcagtttgtaatcgtagcatct
ccaatgggcaacaaacgtgtttctgacgcattgctagtgtacaatgattcggatgtcgct
cagctccgtagcgaggttgatatcaacgtaaggcctataaatgatcaaaggccggtgcgt
gttgtggacaaggctttccacgtagtgaggagtgggaaaagattgctaacaacagcagat
gtgtgttaccatgaccccgactgggattttcaagactcgaacctggtctacaaacagcag
ggcacattcagtgggcaacttgtttctgtgaatgactcggctcacaaccttacggaattc
aaacaacaagaccttgagaatggcctcgttttattcgtacaccacggaggagacgctagt
catcttgcactgatggtttctgatggacttcatcgagtgtccggtctgctggagatccga
gcttcagaagccttcctcagagtgacgagtcccattagtgtacttgtaacacaggggcag
agctgcactctcaccgcacttcacctcggcgtcttcacaaacatggacatcaggcacgag
aacgaaatccagtatcgcgtggcgactccgccgatgcacggccagttgatcatcggagag
gtcgccagcgacttcttcacccagagcgacgtcacccggggcagggtggtgtacgagcac
gccaacggctctgtgcccagggacgtgatcggcctgcacgtggcggcgcacggcctggag
acgcgggcggagctggcggtgcgcgtgcggttggcggcgcacggcaccgccccggtgctc
gtgcacaacagcagcagcggcggcggcgtgctggtggagagaggcggggtggtgaggatc
accgacagcgcgctgctggtctcgcatgaagccagtctcccttccgaaatcacgttcacc
gtcataagacctccgaagcatggatttttgaagaagcgagatgtgaccgtcccaaagtca
ccaacgcggaaggccgagggcctcgtctccttcacccagcaggagatcaacgaggaaatg
atcgagtatctgcacaccgagctgcccgcgacagaggatagcttcacagtggattcgtcc
aatggcttcatggaattgcgtggggtggacatgtgtatcagtgttattccatcggagatt
gagctgaccattcagaacctgaccgtcgccgagggagggctggcggtgctgacgcaagac
gacatatccagcacgaatcccttgtttgaccgtctgaggttgcactacgtcatagtggag
caacccaagcacggacacattcagaacgctcgcaaaccggacatgcgcctcgccggattc
tacgggtgggaggtggcacagggactgatggagtacgcgcacgatggcagcgagaccgcc
ggtgacagcctcgtgctgatggccaatgactcgcacctgcacaagcacagccggccactc
accctgcccattctcgtggtgcccgtcaacgacgaggcgcctgccatcatcgtcaacaat
gtgctcaaggtgtggtttggctccgtgacccccatcacgacagcagagctgagcgcccag
gacctcgactcgctacccgaggacgtgctcttcaccatctcgccccccagcagtggatac
gtggcgctggccgcctcgcccagcaggccagtgctgaacttcacgcaggcggacgtgctt
cgtgggcgtgtgctgtatgcacatagagattccatggaggtggagtttgctttccacgtg
tcggatgggcagcacaggagcccgacggaggtgttcctcatcgcggcgcagcgcctgatc
atcacgctgcacggaagccgtgtcctgcagctctaccctggtgccacgcggaccattggc
agccaagagctacgggcgtcaacaaacgacgaagacccattacgccaccgccgcgtattg
tactccgtcagccggggacctcggatgggagcactcgtacgcgcagatgccccccacaac
cccatctacaacttcacgcaggaggaggtatgtcaggggctggttgcctacaagcacggc
ggcttttcggatccgcgctgggaagccgaggatgactttgagttcacggcgctgtcaccc
cctgcacggccggagaagcagaaccttcacttctccatctcctaccggcacacggactcc
gagcaccgcagcaggctgctcgccaacacaggagcaaatgtgacgcaagggggaagcgtc
acgatcgacaagacgaacctggacgcatcaaacgtcctgaccaagtttccacccgacgag
cgattggattacgaggtcaccttctacgtgacgcggttgccaaagtttggccagctctcc
gtcggcgccagaaacatctctcaaagtcgaccgtccttttcccagctggatgtggagagg
catggtctccggtacacgcaggacacgcgcgcgctgttgggagacggaggagctgcagcg
tcattgaattttaaacggaaggagcccggtgctgtagcctttagaggaaacgctcgcata
gcaggtgacagcgcagcaaacacgggaagtgatttacgtcacgctaaaatgcacaaggag
atggagctgaagttttggaccgacagcttcaacttcagtgtgcggttgacgccacgtgat
gaccaggcaaaagaatctgaggacatcagtgtgatcgcgggagagacctttattgttcgc
attttcccattgaacattcaccctccggtgttccagatgcagcagcccactctccaggtg
gtgttgggacaagcaacgctgattacatcgtcgcatttgctgactacagataaagacaac
cacgcacaggacctcgtgtacacgctgatcactcctcccaccaatggatggctggccttt
gcagacaacgccactgcctccgtccaacagtttactcaggaggacatcgacaccatgcag
cttgtgttcgtgcagagcggcggcttgagatcaccgggtggatttgacgtgagcatcagt
gatgggaagcaccctccgctcacgcaacgcattgtggtcgaagtggttttaccgtccata
tctctctcgaacaacacgaacatcacgatccttcagggtcaaacatcggtaaacgtcacc
aatgcaatgctcgctgcagttacaaacgtgagaaatgtggcactgcgctaccacattaca
aaaccgccaacgcacggcattttaatgaaacgcggaaaatccgtcgatacctttgaacag
gaagacatcgatggaatgcatctgatgtacaccatggtagacttaacatctcctaatgat
agctttgtgtttgacgttcattccaacaacgtgagcatttctggacaggcagtgaacatc
ttggtccatcccttggttaagatcgggcaaaggctgcaaatcagtccaggcagtgaggtg
cagctcggagaggatcacttggactgcagcccccttgcgctcttgactcaaagttcgccc
acatttcgcattattaaacacccgcagcatggccagctactgtggaaaaacacgacgctc
agagcacctagggaaacggacatctccccggttgcctcgggagatcggcgtgcgaggtcg
cgtacggctgggacgaggatgaacagacgcgctgagcaggtctcgactttcacgcaagac
gacctgcatcgtggacgagttctcctgaaggtggcagagagtaatgtaattttgattgac
aatatgacagtggactactttcagtacgagctttcggcacaaggagtgcagcctgccatt
gggcaatttgtgtacgagattttattcccgaatcgcgatccgttttccagcgtgctgaca
gcgcagatgtttttccctttcaacgattcaaactcagccgaaattaatataacacattta
gttgaagggtacataatgaacggagttgcaacagaacaagatctaaccatgcctacattt
agtgtggatttagagaacccagttccaggaacatttcacaattactatgggatttcagag
aagactctgtattacataattcttcccactttaattgtaattgccatgctggtcattgct
atcatcgtcatgatcacatacaagaagaagagagcaaagggcctgggtcagaacttctct
tgcggtttcaaggtggggaggatggagcgctccccggccgtgccgtcggtgaccgtgacc
cccctagacccggggcccgccgaggtctacctctacgagccggtccccgactcgtgcatc
gacgacgcggcactccgcgcgcacagcccagaggcgacgcagggtccggcgccgggcgac
gacgactcgccagaggacggggacaccgacatctctgccgctccatgcgactggagcctc
atggacccggagctgctgcagcactaccgcacgagcagtcccgtgctgaaggagaaccag
tactgggtgtga
DBGET
integrated database retrieval system
