Lethenteron reissneri (Far Eastern brook lamprey): 133359613
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Entry
133359613 CDS
T09663
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133359613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133359613
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133359613
Intermediate filaments
Intermediate filament-binding proteins
133359613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CREPT
Motif
Other DBs
NCBI-GeneID:
133359613
NCBI-ProteinID:
XP_061434068
LinkDB
All DBs
Position
8:1380136..1532694
Genome browser
AA seq
2171 aa
AA seq
DB search
MSEFDFDSEEIQQQYEYVNSRWDFPEEEDPEDENNPARLFERSRIKALADEREEVQKKTF
TKWVNSHLSRVSCRISDLYADLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCLENVEKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDSREVKSAKDALL
LWCQMKTAGYPNVRVHNFTTSWRDGLAFNALIHKHRPDLIDFDALDPADPYGNMQTAFNV
AEQKLGLTQLLDAEDIAVEHPDEKSVITYVVTYYHYFSKMKALAVEGKRIGKVLESAMET
DQMIEKYDSLASDLLDWIEQTIAILNNRTFANSLTGVQQQLQAFSSYRTVEKPAKFTEKG
NLEVLLFTIQSRMRANNQKVFLPGEGKLISEINKAWERLEKAEHERELALREELIRQEKL
EQLARRFDRKAAMRESWLTENQCLVLQDNFGSDLAAVEAATKKHEAIETDMAAYEERVHA
VLHVAQELQAENYHDVARVAARRDNVLRLWRYLQELLCGRRARLEANLALQRTLHEMLHL
LHSMEELKGRLLSQDFGKHLLGVDDLLQKHALLEADAAVLATRVHNVTAAARKFAENSDG
YQACDPQVVSARVAMLEGCLDELLRLAAERRAGLLESRRLWKLVGEISEEEAWIREKERI
LSSDDFGRDLTSIVRLLSKHRALEDELQHREQRVRQAVADGQGMVEQRHFAADKIAERAG
NLLSLWSQLGRAAALRKLRLEQAASLFQFLADADDADAWTMDHFRLVSSSDIGHDEFSTQ
ALAKKHRDIVEEIGNYASAIQGLQEQADALPDEVARCGGVSERMSNTKQQYGDLLQLAAQ
RKQQLDDALALFKLFSEADACELWIDEKQKWLDQLEIPDKLEDLEVVQHRFEGLEPEMSA
QDSRIGVVNGVAEHLIRDGHPSETAIHAKRDNLNSRWDVFRKHVAQKKEALLSALSIQNY
HLECRETNSWIQDKIKLVASTQDLGNDLAGVMALQRKLFGIERDLAAIGGKLQELRGEAG
ALASRHPEQAPGILGQLEAVDGVWGDLAGTLQRREESLGEARKLQNFLRDVDSFQGWLSG
AQMAVASEELPSSLPAAETLLVQHGAIKTDIDNHQDDYQKIRGVGDDVTRGETDAQHVFL
QQRLQALDGGWKDLHRMWDNRRDVLAQAHGYQTFLRDASQADSFLTNQEYVLSHTEKPAS
LEGAEAAIRKHEDFLSSMEANRDRINGVVASGKNLVMAGNAHTDKIQERVDNITDRHAKN
QDTARELQFLLKDNRDLQKFLQDCQELRLWISEKMVTASDASPCGEARGLHSKWLKHQAF
MAELASNQEWLHNVKEAGAVLVQQQPGAAPLVQEKLGELQALWRQLESCTQHKAEELFDA
NRTELLAQSCSTLNNWLGDVENQLQSDDYGQDLTSVNILLNKQQLLEKQVEVRAKEAEDL
SGQAEALQREGKGGPEVAGQRHALERRVHHVAGPLAQRRERLLASKEGFQFNRDLEDEML
WVEERMPLATSSDHGNNLQTTQLLIKKNETLQKETEGHRPRMEEVYQRGKALLARGVVPP
SGGDRLEGLKATWTRLGQEVDKRRGRLEAALRAYQFYCDAAQAEAWMDEQELHMITQEKA
KDEASATAQLARCDQLERAVLDYGDAVRRLGDGARAMVDAAHPDSEQIRSKQSQVERLYR
SLQELVQERHVGAGGLCRLFHLQREVEDLQQWISEKEVLAVSPELGQDYEHVTMLQEKFT
ELARDTEGIGQERVDAFGKAADELLREGHPDSPTVRQWKASLDASWRKLLEKMATRKRGL
AGSARIHKLLHDARELQGRVQEKQAQIPEESGRDLNHVASLQRMHSALEHDLLALGAQVQ
QLREECSLLLSGDIGDKAPEVRRQEEKVVASWTALQEACKAHRLSLAQASERFHFFSLVR
DLMLWMETIIRQIKAQDTPRDVSAVELLMNYHQGIKAEVEARDDNFAACIDLGKSLIARN
HDAAQEIKEKLEQLNEKRQTMLDMWDNRWDWLQILIEVCQFARDSNVAEAWLVMQEACLS
TTELGDSVDAVEKLLKRHEALEKLASTWEERFSLLERPTSLEIREFRRRDEFGSQDSLHS
NHGVALHNGAGQSAMAPETDARGDLPPYNGFSNSSPLDSPRLGYRSQTYQNYRPKRRGTL
EPAKPHGVAQD
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcgactttgacagcgaggagatccaacagcagtatgagtacgtcaacagc
cgctgggacttccccgaggaggaggaccccgaggacgagaacaaccccgctcgcctcttc
gagcggtcgcgcatcaaggccctggcagacgagcgcgaggaggtgcagaagaagaccttc
accaagtgggtgaactcgcacctatcgcgcgtctcctgccgcatcagcgacctctacgcc
gacctgcgcgacgggcgaatgctcatcaagctgctcgaggtcctctccggcgagcgcctg
ccgaagcccacgaagggcaagatgcggatccactgcctggagaacgtggagaaggccctg
cagttcctcaaggagcagcgcgtccacctcgagaacatgggctcccacgacattgtcgac
ggcaaccaccgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccag
gacatcagcgtggaaacggaggacagccgggaggtgaagtcggccaaggacgccctgctg
ctgtggtgccagatgaagacggcaggatacccgaacgtccgcgtccacaacttcaccacg
agctggagagacggcctcgcgttcaacgccctgattcacaagcacaggccggacctcatc
gactttgatgccctggaccccgcggacccctacggcaacatgcagacggccttcaacgtg
gccgagcagaagctggggctgacgcagctgctggacgcagaggacattgcggtggagcac
ccggacgagaagtcggtcatcacctacgtggtcacctactaccactacttctccaagatg
aaggcgctggccgtggagggcaagcgcattgggaaggtgctggagagcgccatggagacc
gaccagatgatcgagaagtacgacagcctggcctcggatctcctcgactggatcgagcag
accatcgccatcctcaacaaccgcaccttcgccaactcgctgacgggcgtgcagcagcag
ctgcaggcgttcagctcctaccgcaccgtggagaagccggccaagtttacagagaaggga
aacctggaagtgctgctgttcaccatccagagcaggatgcgtgccaacaaccagaaggtt
ttcctgccgggagagggcaagctcatctccgagatcaacaaggcgtgggagcggctggag
aaggcggaacacgagcgcgagctggcgctgcgggaggagctcatccgccaggagaagctg
gagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgcgagagctggctcactgaa
aaccagtgtcttgtgctgcaggacaactttgggagcgacctggcggccgtggaggcggcg
accaagaagcacgaggcgatcgagaccgacatggctgcctacgaggagcgcgtgcacgcc
gtgctgcacgtggcccaggagctgcaggccgagaactatcacgacgtggcgcgcgtggcg
gcccgtcgggacaacgtcctgcggctgtggcgctacctgcaggagctgctgtgcgggcgg
cgtgcccgcctcgaggccaacctggccctgcagagaacgctgcacgagatgctgcacctg
ctgcacagcatggaggagctcaaggggcgcctgctgtcgcaggactttgggaagcacctg
ctgggcgtggacgacctcctgcagaagcacgcgctgctggaggccgacgcggccgtcctg
gccacgcgggtccacaacgtcacggccgccgctcgcaagtttgccgagaacagcgacggt
taccaggcgtgcgacccgcaggtggtgagcgcgcgggtggccatgttggagggctgcctg
gacgagctgctgcggctggcggccgagcggcgcgccggcctgctcgagtcgcgccgcctc
tggaagctcgtcggcgaaatctccgaggaggaggcgtggatccgggagaaggagcgcatc
ttgtcgtcggacgactttggccgcgacctcaccagcatcgtccgcctgctgagcaagcac
cgcgccctcgaggacgagctgcagcaccgcgagcagcgcgtgcggcaggccgtcgccgac
ggccagggcatggtcgagcagaggcacttcgccgcggacaagatcgccgagagagccggc
aacctcctgtcgctctggtcccagctggggcgggcggccgccctacgcaagctgcgcctg
gagcaggccgcgagcctcttccagttcctggccgacgcggacgacgcggacgcgtggacc
atggatcacttccgcctcgtctccagcagcgacatcggccacgacgagttctccacgcag
gccctggccaagaagcaccgggacatcgtcgaggagatcggcaactacgcgtccgcgatc
cagggcctgcaggaacaggccgacgctctgcccgacgaggtggcccgctgcggcggggtg
agcgaaaggatgagcaataccaagcagcagtatggcgacctgctgcagctcgctgcccag
cgcaagcagcagctggacgacgccctcgcgctgttcaagctcttcagcgaggcggacgcg
tgcgagctgtggatcgacgaaaagcagaagtggctcgaccagctggagataccggacaag
ctggaggacctcgaggtcgttcagcacagatttgagggccttgagcctgagatgagtgcc
caggattctcggatcggggtggtgaacggagtggccgagcatctgatcagggacggacat
ccgagcgagacggcgatccacgctaagagagacaacctcaacagcaggtgggatgtcttc
cgaaagcacgtggcccagaagaaggaggccctcctgtcggccctgagcatacagaactac
cacctggagtgccgagaaaccaactcgtggatccaagacaagatcaagctggtcgcgtcg
acgcaggacctcggcaacgacctggcgggagtgatggcgttgcagcggaagctgttcggc
atcgaacgcgacctggccgccatcgggggcaagctgcaggagctgcgcggggaagccggg
gcgctcgcctcgcggcaccccgagcaggcgccgggcatcctcggccagctggaggcggtg
gacggggtgtggggcgacctcgcggggacgctgcagcgtcgcgaagagtcgctcggcgaa
gctcgcaagctgcagaacttcctgcgcgacgtcgactccttccagggctggctgtccggc
gcccagatggccgtggcctcggaggagctgcccagcagcctgcccgccgccgagaccctg
ctggtgcagcacggggccattaaaaccgacatcgacaaccaccaggacgactaccagaag
atccgcggcgtcggcgatgacgtgacccgaggggaaacggacgcgcagcacgtgttcctc
cagcagcggctgcaggctctggacggcgggtggaaggatttgcaccgcatgtgggacaat
cggcgcgacgtcctcgcccaggcgcacggctaccaaaccttcctgcgagacgccagccag
gccgacagcttcctcaccaaccaggagtacgtgttgtctcacacggagaagccggcttcc
ctggaaggcgccgaggcggcgatccgcaagcacgaggacttcctctcgtcgatggaggcc
aaccgcgaccggataaacggtgtcgtcgcatccggaaaaaatctggtcatggcaggaaat
gcacacacggacaagatccaggagcgcgtggacaacatcacggaccggcacgcgaagaac
caggacactgccagggaacttcagttcctcctcaaggacaacagggacctgcagaagttc
ttgcaagactgccaggagctgaggctgtggatcagcgagaagatggtgaccgcgagcgac
gcgtcgccctgcggcgaggcgcgaggcctgcacagcaagtggctcaagcaccaggccttc
atggcggagctcgcttccaaccaggagtggctgcacaacgtcaaagaggccggcgccgtg
ctggtgcagcagcagcccggcgcggcccccctggtgcaggagaagctgggagagctgcag
gcgctatggcgccagctcgagagctgcacgcagcacaaggccgaggagctgttcgacgcg
aaccgcacggagctgctcgcgcagagctgctcgacgctcaacaactggctgggggacgtg
gagaaccagctgcagtcggacgactacgggcaggacctcaccagcgtcaacatcctcctc
aacaagcaacagctgctggagaagcaggtggaggtgcgtgccaaggaggcggaggatctg
tccggccaggccgaagcgttgcaacgcgagggcaagggcggccccgaggtggccggccag
cggcacgcgctggagcggcgggtgcaccacgtggccgggccgctggcgcagcggcgggag
cggctgctcgcctccaaggagggctttcagttcaacagagacctggaggacgagatgctc
tgggtcgaggagcggatgccactcgcgacgtcttccgaccacgggaataacctgcaaacg
acgcagctcctcatcaagaagaacgagaccctgcagaaggagacggagggccaccgtccg
cgcatggaggaggtgtaccagcgggggaaggcgctgctggcccgcggggtggtgccgccc
agcggcggcgaccgcctggaggggttgaaggcgacgtggacccgcctcgggcaagaggtg
gacaagcggcggggacggctggaggcggcgctgcgggcttaccagttctactgcgacgcg
gcccaggccgaggcctggatggacgagcaggagctgcacatgatcacccaggagaaggcc
aaggacgaggcaagcgcaacggcgcagctcgcgcgctgcgaccagctggagcgcgccgtg
ctggactacggcgacgcggtgcgccggcttggggatggcgcgcgggccatggtggacgcc
gcacaccccgacagcgagcagatcagaagcaagcagtcacaggtggagcggctgtatcgc
agtctgcaggagctggtgcaggagagacacgtcggggcggggggtctgtgcaggctcttc
cacctgcagcgggaggtggaggacctgcagcagtggatctctgagaaggaggtcctcgcc
gtctccccggagctgggccaggattacgagcacgtcacgatgctgcaggagaagttcacg
gagctggcccgagacacggagggcatcgggcaggagcgcgtcgacgccttcggcaaagcg
gccgatgagctgctgcgcgagggccaccctgactcgcccaccgtgcgccagtggaaggcc
tcgctcgacgcatcgtggcgcaagctgctcgagaagatggccacgcgcaagcggggcctg
gcgggctcggcacggattcacaagctgctgcatgacgcgcgggagctgcagggccgcgtg
caggaaaagcaagcgcagatccccgaggagtcgggccgagacctcaaccacgtggcgtcg
ctgcagcgcatgcactcggcgctggagcacgacctgctggcgctcggagcacaggtgcag
cagctgcgcgaggagtgctctctgctgttgagcggcgacatcggagacaaggcgcccgag
gtccgcaggcaggaggagaaggtggtggcctcgtggaccgccctgcaggaggcctgcaag
gcccaccggttgagcctcgcccaggccagcgagaggttccacttcttcagcctggtgcgc
gacctcatgctgtggatggagacgatcatccgacagatcaaggcccaggacacccccagg
gacgtgtctgcggtggagctgctcatgaactaccaccagggaatcaaggcggaggtggaa
gcccgcgacgataacttcgcggcctgcattgacctgggaaaatcgctcatcgcgaggaat
cacgacgccgcacaagagattaaggaaaagctggagcagctgaacgagaagcgacagacc
atgctggacatgtgggataatcgttgggactggctgcagatcttgatcgaggtgtgccag
tttgcgagggattcaaacgtggcggaggcctggctggtgatgcaggaggcgtgcctctcc
accacggagctgggcgacagcgtggacgccgtggagaagctgctgaagcggcacgaggcg
ctggagaagctggcctccacctgggaggagcgcttctcacttctggagcgacccacctcg
ttggagatccgggagttccgccgccgcgatgagtttggcagccaggactcgctgcacagc
aaccacggcgtcgcgctgcacaacggagccggacagtcggccatggctcccgaaaccgac
gcccgcggcgatctcccaccgtacaatggcttctcaaacagctcgccgctcgactcgccg
aggctgggctatcgctcacaaacctaccagaactaccggcccaagcgccggggcacctta
gagccagcaaagccgcacggcgtcgcgcaagactga
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integrated database retrieval system
