Lethenteron reissneri (Far Eastern brook lamprey): 133359613
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Entry
133359613 CDS
T09663
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04517
IgSF CAM signaling
lrj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133359613
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133359613
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrj04812
]
133359613
Cytoskeleton proteins [BR:
lrj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133359613
Intermediate filaments
Intermediate filament-binding proteins
133359613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
CREPT
DUF7854
Viral_env_HRPV
Motif
Other DBs
NCBI-GeneID:
133359613
NCBI-ProteinID:
XP_061434068
LinkDB
All DBs
Position
8:1380136..1532694
Genome browser
AA seq
2171 aa
AA seq
DB search
MSEFDFDSEEIQQQYEYVNSRWDFPEEEDPEDENNPARLFERSRIKALADEREEVQKKTF
TKWVNSHLSRVSCRISDLYADLRDGRMLIKLLEVLSGERLPKPTKGKMRIHCLENVEKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDSREVKSAKDALL
LWCQMKTAGYPNVRVHNFTTSWRDGLAFNALIHKHRPDLIDFDALDPADPYGNMQTAFNV
AEQKLGLTQLLDAEDIAVEHPDEKSVITYVVTYYHYFSKMKALAVEGKRIGKVLESAMET
DQMIEKYDSLASDLLDWIEQTIAILNNRTFANSLTGVQQQLQAFSSYRTVEKPAKFTEKG
NLEVLLFTIQSRMRANNQKVFLPGEGKLISEINKAWERLEKAEHERELALREELIRQEKL
EQLARRFDRKAAMRESWLTENQCLVLQDNFGSDLAAVEAATKKHEAIETDMAAYEERVHA
VLHVAQELQAENYHDVARVAARRDNVLRLWRYLQELLCGRRARLEANLALQRTLHEMLHL
LHSMEELKGRLLSQDFGKHLLGVDDLLQKHALLEADAAVLATRVHNVTAAARKFAENSDG
YQACDPQVVSARVAMLEGCLDELLRLAAERRAGLLESRRLWKLVGEISEEEAWIREKERI
LSSDDFGRDLTSIVRLLSKHRALEDELQHREQRVRQAVADGQGMVEQRHFAADKIAERAG
NLLSLWSQLGRAAALRKLRLEQAASLFQFLADADDADAWTMDHFRLVSSSDIGHDEFSTQ
ALAKKHRDIVEEIGNYASAIQGLQEQADALPDEVARCGGVSERMSNTKQQYGDLLQLAAQ
RKQQLDDALALFKLFSEADACELWIDEKQKWLDQLEIPDKLEDLEVVQHRFEGLEPEMSA
QDSRIGVVNGVAEHLIRDGHPSETAIHAKRDNLNSRWDVFRKHVAQKKEALLSALSIQNY
HLECRETNSWIQDKIKLVASTQDLGNDLAGVMALQRKLFGIERDLAAIGGKLQELRGEAG
ALASRHPEQAPGILGQLEAVDGVWGDLAGTLQRREESLGEARKLQNFLRDVDSFQGWLSG
AQMAVASEELPSSLPAAETLLVQHGAIKTDIDNHQDDYQKIRGVGDDVTRGETDAQHVFL
QQRLQALDGGWKDLHRMWDNRRDVLAQAHGYQTFLRDASQADSFLTNQEYVLSHTEKPAS
LEGAEAAIRKHEDFLSSMEANRDRINGVVASGKNLVMAGNAHTDKIQERVDNITDRHAKN
QDTARELQFLLKDNRDLQKFLQDCQELRLWISEKMVTASDASPCGEARGLHSKWLKHQAF
MAELASNQEWLHNVKEAGAVLVQQQPGAAPLVQEKLGELQALWRQLESCTQHKAEELFDA
NRTELLAQSCSTLNNWLGDVENQLQSDDYGQDLTSVNILLNKQQLLEKQVEVRAKEAEDL
SGQAEALQREGKGGPEVAGQRHALERRVHHVAGPLAQRRERLLASKEGFQFNRDLEDEML
WVEERMPLATSSDHGNNLQTTQLLIKKNETLQKETEGHRPRMEEVYQRGKALLARGVVPP
SGGDRLEGLKATWTRLGQEVDKRRGRLEAALRAYQFYCDAAQAEAWMDEQELHMITQEKA
KDEASATAQLARCDQLERAVLDYGDAVRRLGDGARAMVDAAHPDSEQIRSKQSQVERLYR
SLQELVQERHVGAGGLCRLFHLQREVEDLQQWISEKEVLAVSPELGQDYEHVTMLQEKFT
ELARDTEGIGQERVDAFGKAADELLREGHPDSPTVRQWKASLDASWRKLLEKMATRKRGL
AGSARIHKLLHDARELQGRVQEKQAQIPEESGRDLNHVASLQRMHSALEHDLLALGAQVQ
QLREECSLLLSGDIGDKAPEVRRQEEKVVASWTALQEACKAHRLSLAQASERFHFFSLVR
DLMLWMETIIRQIKAQDTPRDVSAVELLMNYHQGIKAEVEARDDNFAACIDLGKSLIARN
HDAAQEIKEKLEQLNEKRQTMLDMWDNRWDWLQILIEVCQFARDSNVAEAWLVMQEACLS
TTELGDSVDAVEKLLKRHEALEKLASTWEERFSLLERPTSLEIREFRRRDEFGSQDSLHS
NHGVALHNGAGQSAMAPETDARGDLPPYNGFSNSSPLDSPRLGYRSQTYQNYRPKRRGTL
EPAKPHGVAQD
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttcgactttgacagcgaggagatccaacagcagtatgagtacgtcaacagc
cgctgggacttccccgaggaggaggaccccgaggacgagaacaaccccgctcgcctcttc
gagcggtcgcgcatcaaggccctggcagacgagcgcgaggaggtgcagaagaagaccttc
accaagtgggtgaactcgcacctatcgcgcgtctcctgccgcatcagcgacctctacgcc
gacctgcgcgacgggcgaatgctcatcaagctgctcgaggtcctctccggcgagcgcctg
ccgaagcccacgaagggcaagatgcggatccactgcctggagaacgtggagaaggccctg
cagttcctcaaggagcagcgcgtccacctcgagaacatgggctcccacgacattgtcgac
ggcaaccaccgcctcacgctcggcctcatctggaccatcatcctccgcttccagatccag
gacatcagcgtggaaacggaggacagccgggaggtgaagtcggccaaggacgccctgctg
ctgtggtgccagatgaagacggcaggatacccgaacgtccgcgtccacaacttcaccacg
agctggagagacggcctcgcgttcaacgccctgattcacaagcacaggccggacctcatc
gactttgatgccctggaccccgcggacccctacggcaacatgcagacggccttcaacgtg
gccgagcagaagctggggctgacgcagctgctggacgcagaggacattgcggtggagcac
ccggacgagaagtcggtcatcacctacgtggtcacctactaccactacttctccaagatg
aaggcgctggccgtggagggcaagcgcattgggaaggtgctggagagcgccatggagacc
gaccagatgatcgagaagtacgacagcctggcctcggatctcctcgactggatcgagcag
accatcgccatcctcaacaaccgcaccttcgccaactcgctgacgggcgtgcagcagcag
ctgcaggcgttcagctcctaccgcaccgtggagaagccggccaagtttacagagaaggga
aacctggaagtgctgctgttcaccatccagagcaggatgcgtgccaacaaccagaaggtt
ttcctgccgggagagggcaagctcatctccgagatcaacaaggcgtgggagcggctggag
aaggcggaacacgagcgcgagctggcgctgcgggaggagctcatccgccaggagaagctg
gagcagctggcgcgccgcttcgaccgcaaggcggcgatgcgcgagagctggctcactgaa
aaccagtgtcttgtgctgcaggacaactttgggagcgacctggcggccgtggaggcggcg
accaagaagcacgaggcgatcgagaccgacatggctgcctacgaggagcgcgtgcacgcc
gtgctgcacgtggcccaggagctgcaggccgagaactatcacgacgtggcgcgcgtggcg
gcccgtcgggacaacgtcctgcggctgtggcgctacctgcaggagctgctgtgcgggcgg
cgtgcccgcctcgaggccaacctggccctgcagagaacgctgcacgagatgctgcacctg
ctgcacagcatggaggagctcaaggggcgcctgctgtcgcaggactttgggaagcacctg
ctgggcgtggacgacctcctgcagaagcacgcgctgctggaggccgacgcggccgtcctg
gccacgcgggtccacaacgtcacggccgccgctcgcaagtttgccgagaacagcgacggt
taccaggcgtgcgacccgcaggtggtgagcgcgcgggtggccatgttggagggctgcctg
gacgagctgctgcggctggcggccgagcggcgcgccggcctgctcgagtcgcgccgcctc
tggaagctcgtcggcgaaatctccgaggaggaggcgtggatccgggagaaggagcgcatc
ttgtcgtcggacgactttggccgcgacctcaccagcatcgtccgcctgctgagcaagcac
cgcgccctcgaggacgagctgcagcaccgcgagcagcgcgtgcggcaggccgtcgccgac
ggccagggcatggtcgagcagaggcacttcgccgcggacaagatcgccgagagagccggc
aacctcctgtcgctctggtcccagctggggcgggcggccgccctacgcaagctgcgcctg
gagcaggccgcgagcctcttccagttcctggccgacgcggacgacgcggacgcgtggacc
atggatcacttccgcctcgtctccagcagcgacatcggccacgacgagttctccacgcag
gccctggccaagaagcaccgggacatcgtcgaggagatcggcaactacgcgtccgcgatc
cagggcctgcaggaacaggccgacgctctgcccgacgaggtggcccgctgcggcggggtg
agcgaaaggatgagcaataccaagcagcagtatggcgacctgctgcagctcgctgcccag
cgcaagcagcagctggacgacgccctcgcgctgttcaagctcttcagcgaggcggacgcg
tgcgagctgtggatcgacgaaaagcagaagtggctcgaccagctggagataccggacaag
ctggaggacctcgaggtcgttcagcacagatttgagggccttgagcctgagatgagtgcc
caggattctcggatcggggtggtgaacggagtggccgagcatctgatcagggacggacat
ccgagcgagacggcgatccacgctaagagagacaacctcaacagcaggtgggatgtcttc
cgaaagcacgtggcccagaagaaggaggccctcctgtcggccctgagcatacagaactac
cacctggagtgccgagaaaccaactcgtggatccaagacaagatcaagctggtcgcgtcg
acgcaggacctcggcaacgacctggcgggagtgatggcgttgcagcggaagctgttcggc
atcgaacgcgacctggccgccatcgggggcaagctgcaggagctgcgcggggaagccggg
gcgctcgcctcgcggcaccccgagcaggcgccgggcatcctcggccagctggaggcggtg
gacggggtgtggggcgacctcgcggggacgctgcagcgtcgcgaagagtcgctcggcgaa
gctcgcaagctgcagaacttcctgcgcgacgtcgactccttccagggctggctgtccggc
gcccagatggccgtggcctcggaggagctgcccagcagcctgcccgccgccgagaccctg
ctggtgcagcacggggccattaaaaccgacatcgacaaccaccaggacgactaccagaag
atccgcggcgtcggcgatgacgtgacccgaggggaaacggacgcgcagcacgtgttcctc
cagcagcggctgcaggctctggacggcgggtggaaggatttgcaccgcatgtgggacaat
cggcgcgacgtcctcgcccaggcgcacggctaccaaaccttcctgcgagacgccagccag
gccgacagcttcctcaccaaccaggagtacgtgttgtctcacacggagaagccggcttcc
ctggaaggcgccgaggcggcgatccgcaagcacgaggacttcctctcgtcgatggaggcc
aaccgcgaccggataaacggtgtcgtcgcatccggaaaaaatctggtcatggcaggaaat
gcacacacggacaagatccaggagcgcgtggacaacatcacggaccggcacgcgaagaac
caggacactgccagggaacttcagttcctcctcaaggacaacagggacctgcagaagttc
ttgcaagactgccaggagctgaggctgtggatcagcgagaagatggtgaccgcgagcgac
gcgtcgccctgcggcgaggcgcgaggcctgcacagcaagtggctcaagcaccaggccttc
atggcggagctcgcttccaaccaggagtggctgcacaacgtcaaagaggccggcgccgtg
ctggtgcagcagcagcccggcgcggcccccctggtgcaggagaagctgggagagctgcag
gcgctatggcgccagctcgagagctgcacgcagcacaaggccgaggagctgttcgacgcg
aaccgcacggagctgctcgcgcagagctgctcgacgctcaacaactggctgggggacgtg
gagaaccagctgcagtcggacgactacgggcaggacctcaccagcgtcaacatcctcctc
aacaagcaacagctgctggagaagcaggtggaggtgcgtgccaaggaggcggaggatctg
tccggccaggccgaagcgttgcaacgcgagggcaagggcggccccgaggtggccggccag
cggcacgcgctggagcggcgggtgcaccacgtggccgggccgctggcgcagcggcgggag
cggctgctcgcctccaaggagggctttcagttcaacagagacctggaggacgagatgctc
tgggtcgaggagcggatgccactcgcgacgtcttccgaccacgggaataacctgcaaacg
acgcagctcctcatcaagaagaacgagaccctgcagaaggagacggagggccaccgtccg
cgcatggaggaggtgtaccagcgggggaaggcgctgctggcccgcggggtggtgccgccc
agcggcggcgaccgcctggaggggttgaaggcgacgtggacccgcctcgggcaagaggtg
gacaagcggcggggacggctggaggcggcgctgcgggcttaccagttctactgcgacgcg
gcccaggccgaggcctggatggacgagcaggagctgcacatgatcacccaggagaaggcc
aaggacgaggcaagcgcaacggcgcagctcgcgcgctgcgaccagctggagcgcgccgtg
ctggactacggcgacgcggtgcgccggcttggggatggcgcgcgggccatggtggacgcc
gcacaccccgacagcgagcagatcagaagcaagcagtcacaggtggagcggctgtatcgc
agtctgcaggagctggtgcaggagagacacgtcggggcggggggtctgtgcaggctcttc
cacctgcagcgggaggtggaggacctgcagcagtggatctctgagaaggaggtcctcgcc
gtctccccggagctgggccaggattacgagcacgtcacgatgctgcaggagaagttcacg
gagctggcccgagacacggagggcatcgggcaggagcgcgtcgacgccttcggcaaagcg
gccgatgagctgctgcgcgagggccaccctgactcgcccaccgtgcgccagtggaaggcc
tcgctcgacgcatcgtggcgcaagctgctcgagaagatggccacgcgcaagcggggcctg
gcgggctcggcacggattcacaagctgctgcatgacgcgcgggagctgcagggccgcgtg
caggaaaagcaagcgcagatccccgaggagtcgggccgagacctcaaccacgtggcgtcg
ctgcagcgcatgcactcggcgctggagcacgacctgctggcgctcggagcacaggtgcag
cagctgcgcgaggagtgctctctgctgttgagcggcgacatcggagacaaggcgcccgag
gtccgcaggcaggaggagaaggtggtggcctcgtggaccgccctgcaggaggcctgcaag
gcccaccggttgagcctcgcccaggccagcgagaggttccacttcttcagcctggtgcgc
gacctcatgctgtggatggagacgatcatccgacagatcaaggcccaggacacccccagg
gacgtgtctgcggtggagctgctcatgaactaccaccagggaatcaaggcggaggtggaa
gcccgcgacgataacttcgcggcctgcattgacctgggaaaatcgctcatcgcgaggaat
cacgacgccgcacaagagattaaggaaaagctggagcagctgaacgagaagcgacagacc
atgctggacatgtgggataatcgttgggactggctgcagatcttgatcgaggtgtgccag
tttgcgagggattcaaacgtggcggaggcctggctggtgatgcaggaggcgtgcctctcc
accacggagctgggcgacagcgtggacgccgtggagaagctgctgaagcggcacgaggcg
ctggagaagctggcctccacctgggaggagcgcttctcacttctggagcgacccacctcg
ttggagatccgggagttccgccgccgcgatgagtttggcagccaggactcgctgcacagc
aaccacggcgtcgcgctgcacaacggagccggacagtcggccatggctcccgaaaccgac
gcccgcggcgatctcccaccgtacaatggcttctcaaacagctcgccgctcgactcgccg
aggctgggctatcgctcacaaacctaccagaactaccggcccaagcgccggggcacctta
gagccagcaaagccgcacggcgtcgcgcaagactga
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integrated database retrieval system
