Lethenteron reissneri (Far Eastern brook lamprey): 133360086
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Entry
133360086 CDS
T09663
Name
(RefSeq) nucleoporin NUP188-like
KO
K14311
nuclear pore complex protein Nup188
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133360086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133360086
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133360086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
133360086
NCBI-ProteinID:
XP_061434659
LinkDB
All DBs
Position
67:complement(597702..641973)
Genome browser
AA seq
1698 aa
AA seq
DB search
MGICRTWRTLRAVYADCLERLQQSLTSRHVEQLEERLGSPRRSAIPRNMAERQAACWAQQ
CLREQCLLLELLFLYYVYFEMKPHALLRLARLFHAQSFGLRQLQGLEAPHEGSAMLVSRT
SVRFLLIEGMDIEFLAKCAQGDCVEQHQLVKDEAVFKELDQLLQSLGDLEIHGPVLLAWA
MLRYKALPDDPKSATRRLGRSAVQLQAFRLVCRLLRAPGFSGSSCTSSTARAVVYGLLSF
VLGLFDEGTLGEPQDLMDVACEVLSMPALAEAFWDAGLAGGLAMLLDSAAAQFPYACAPL
LQLLTATVVSQATAKRVYNFLDKMTCYAEAVPQRPRDIEASEDGTMWRTTAPRHLYPFGA
GRTTMRLPQGVVGRVLPLGPTVPGGPSALVHWEFGYSAWALFACEVEMLLHVVSTADVAR
HCERVRPIVQLVRQLLDADGSLAAPLLPVTSRLYMVLQRLTCVPSPPLDVIAACVNCLAA
LVPYGAAKVWSDVQHTGLLPFTVSPVSNAARAASGEGMHAGNYGNLLVGFERHRGDFRVT
ASYLRLVTALLKGLVGSSQYPSLLPCLVFTLKEILALVPHVGAGRRRRAPRVHRVVVFVV
IMSSRLFDLLHGIVCAVSVGKLMLEQIHFVLNISVDSGRGPSLQAVCLHSLLHGESGLAL
IHMLSIGVGAIDTVLAAQPGRVLEGPALTLIQTMKLAFSVINNTLRLKPASDELTPLEHA
LTQQGVHGNVMAILARYIYHRHDAALPRLAVQLLKRLAMVAPMSVYGCLGGDAPAIRDAF
IGRLRSPTEDMRIKVMILEFLTVAVETQPGLIELFLDLQPESGADSGSKELALGNGSCLP
VVLELVCVEGPGAPSCPPLLHRTAVAFVYALWQDRRQSAMTILRSRKDFWENLTYPLFSD
FLPISTDIEVSTLEACAFILKIISLEVFYVVSGSLDPSLVLVLRRLNEGGRYRYWSGYVR
GLACRLASRAQLGDGDQDVGGGGGGAGYAAAPEAAEDGTNLVEAWRTLLILATNHGNILF
LDDDETRATVMQDVLAGLSVLVKVECSRLCMHLMAMLSTTLCVLLRHWGSALPGGQDVLP
ELLDVLRRLQQATERRLAEKIKARLLAAVMLVLQQRRLRAGTLPGHKQLVQLVCETLRQE
VTALMEQSQSSWRAAAAAAPQAGTLGVDSMDTDSAPAPARDDRDGVCVVALHLAKELYLL
EEGTGGGGGGGSGYLSCVREGALLPAVGAALEWSLQRRCQLHFTEAALHWLLALSTTAEG
AQALAAVGVLQCLCLPLLSTYQVDANGLAALEKAGGPPRRSHEAPSWQGAYCLCLAVLQA
VLRQLRHSALPQALDFLGVHQERILQSLQAVRGVLGQACLEEAEKTVAFLLHLAYFTREW
HFHLPLLLNSVQVALCSLCQTCTALLHSQKLLQQYLASKSAGLAAAPGRDGGGRGGCGTG
VGVGGVGGTGEVGQEAERGPGGVALAQASLLRILGTTLAALRRFSPDVCQILLDQTMDLS
EYEPLFSLSLVAPSCDADASPSLGSLLSAISVAQGLAAQADGKRELAKHTNAGDLKALKP
TLVFVMENALALLMSQAMLYLKHCTVSCRDKQRIKRELSSELEALQNGMLRWVRRGSPVS
PGAGGGGSGAGGGSGGAATGGAGGTSAGVSLQAKGGGGGGSGGGRATSRSAGAAGGVADA
WEHAFHDLVDLFLKRVLR
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggggatctgcaggacgtggcgaaccttgcgggccgtgtacgccgactgcctggagcgc
ctgcagcagagcctcacctcgcgccacgtggagcagctggaggagcgactcggctcccct
cgtcgctctgccattccacggaacatggcggagcggcaggcggcgtgctgggcgcagcag
tgcctgcgcgagcagtgcctgctgctggagctgctcttcctctactacgtctacttcgag
atgaagccgcacgcgctgctccgcctcgcgcgcctcttccatgcgcagagtttcggcctg
cgccagctacaggggctggaggcgccgcacgagggcagcgccatgctcgtcagccgtact
tctgtgcgctttcttctcatcgagggcatggacatcgagttcctggccaagtgcgcgcag
ggcgactgcgtggagcagcaccaactggtcaaggacgaggccgtgttcaaggagctggac
cagctgctgcagagcctcggcgacctggagattcacggccccgtgctgctcgcgtgggcc
atgctgcgctacaaggcgctgccggacgaccccaagtcagcgacccgccgcctgggccgc
tccgccgtgcagctgcaggcgttccgcctcgtgtgccgcctgctgcgggcgcccggcttc
agcggcagcagctgcacgtccagcacagcgcgcgcggtcgtctacggcctgctgtccttc
gtgctcggcctcttcgacgagggcacgctaggagagccccaggacttgatggacgtggcg
tgcgaggtgctgagcatgcctgctctcgccgaggccttctgggacgctggcctggcggga
ggtctggccatgctgctggactcggctgcggcgcagttcccgtacgcgtgcgcgccgctg
ctgcagctgctcacggccaccgtggtcagccaggccacggccaagcgggtctacaacttc
ctggacaagatgacttgctacgccgaggccgtgccgcagaggccacgcgacatcgaggcg
tccgaagacggaaccatgtggagaacgacggcacccaggcacctctacccgttcggcgcg
gggaggaccaccatgcggctgccgcagggcgtggtgggacgcgtgctgcccctgggccca
accgtgccgggcggcccctccgccctggtgcactgggagtttggctacagcgcgtgggcg
ctgttcgcctgcgaggtggagatgctgctgcacgtggtgtccaccgccgacgtggcgcgg
cactgcgagcgcgtgcgtcccatcgtgcagctggtgcggcagctgctggacgccgacggc
tcgctcgccgcgccgctgcttcccgtcacctcccgcctctacatggtgctgcagaggctc
acgtgtgtacccagcccgccgctcgacgtcatcgcggcgtgcgtgaactgcctggcggcg
ctcgtgccttatggtgccgccaaggtgtggagcgacgtgcagcacacggggctccttccc
ttcaccgtgtcccccgtgagcaacgccgcacgggcagccagcggggagggcatgcacgcg
ggaaactacgggaatctgctcgtcggcttcgagaggcaccggggcgatttccgcgtgacg
gcgtcgtacctccgtctcgtcaccgccctcctgaagggcctggtggggagcagccagtac
ccgagcctgctgccctgcctcgtcttcacgctcaaggagatcctggcgctggtaccgcac
gtgggcgctgggcggcgccgacgggcaccgcgagtgcatcgtgttgttgtcttcgtcgtc
ataatgagttcacgtttatttgatttgttacacggaatcgtctgtgctgtgtctgtagga
aagttgatgctggagcagatccactttgtgctcaacatcagcgtcgacagtggcaggggt
cccagcctgcaggccgtgtgtctgcacagcctcctgcacggcgagtccggcctggccctc
atccacatgctgtccatcggcgtgggcgccatcgacaccgtcctggccgcccagcccggc
cgagttctggagggaccggcgctcacgcttatccagaccatgaagctggcattctccgtc
atcaacaacacgctgaggctcaagccggcgtcggacgagctcacgccgctggagcacgcg
ctcactcagcagggcgtccacggcaacgtgatggcgatcctggcgcgttacatttaccac
cggcacgacgccgcgctgcccaggctcgccgtgcagctgctcaagcgcctcgccatggtg
gcgcccatgtcggtgtacggctgtctcggcggagatgcgccggccatacgggacgccttt
atcggccgcctgcgatcacccaccgaggatatgagaatcaaggtgatgatcctggagttc
ctgacggttgccgtggagacccagcccggcctcatcgagctcttcctggacctgcagccg
gagagcggcgcggatagcggctccaaggagctggcgctgggcaatggcagctgcctgccc
gtggtgctggagttggtgtgtgtggaaggccctggggcgccctcctgtcccccgctgctc
caccgcaccgccgtggccttcgtgtacgcgctgtggcaggaccgtcggcagagcgccatg
accatcctgagaagcaggaaggacttttgggagaacctcacctatcccctgttcagcgac
ttcctgccaatatccaccgacatcgaggtcagcacgctcgaagcgtgcgccttcatcctc
aagatcatctccctggaggtgttctacgtcgtcagtggctctctggacccgtcgctggtg
ctggtgctgcggaggctgaatgagggcggccgttaccgctactggtcgggctacgtgcgc
gggctggcgtgccgcctggcgtcgcgcgcgcagctcggcgacggggaccaggacgttggc
ggcggtggcggcggcgccggctacgcggcggcgccggaggccgcagaagacggaaccaac
ctggtggaggcgtggaggaccctgctcatcctcgccaccaatcacgggaacattctcttc
ctggacgacgacgagacccgggccaccgtcatgcaggacgtcctggcggggctcagcgtc
ctggtgaaggtggagtgcagtcggctgtgcatgcacctcatggccatgctgtctaccact
ctgtgtgttctgctgcggcattggggcagcgctctgccgggcggccaggacgtgctgccg
gagctgctggacgtgctgcgacggctgcagcaggcaacggagcggcgcctcgccgagaag
atcaaagcgcggctcctcgcggccgtgatgctcgttctgcagcagaggcgcctccgagcc
ggtactctgcccggacacaagcagctggtgcagctggtgtgcgagacgctgcggcaggag
gtgacggcgctcatggagcagagccagagctcgtggcgggcggcggcggcggcggcgcca
caagccggcaccctgggagtcgacagcatggacacggattcagctccagcccctgccagg
gatgacagggacggggtgtgcgtggtggcgctgcacttggccaaggagctctacctgctg
gaggagggcacgggcggcggcggtggcggcggcagcgggtacctgagctgcgtgcgtgag
ggcgcgctgctgcccgccgtgggcgctgccctcgagtggagcctgcagcggcggtgccaa
ctccacttcacagaggcggcgctgcactggctgctggcgctctccaccaccgcggagggc
gcccaggcgctggccgcggtcggggtgctgcagtgcctgtgcctgcccctgctgagcacc
taccaggtggacgccaacggcctcgccgcgctcgagaaggctgggggacccccgcggagg
agccacgaggcgcccagctggcaaggcgcctactgcctgtgcctggccgtcctgcaggcc
gtcctgaggcagctgcgtcacagcgccctgcctcaggccctcgacttcctgggcgtccac
caggagcgcatcctgcagagcctgcaggcggtgcggggggtgctgggccaggcctgcctg
gaggaggcggagaagacggtcgccttcctcctgcacttggcctacttcaccagggagtgg
cacttccacctgccgctgttgctgaactccgtgcaggtggcgctctgctccctatgccag
acgtgcaccgccttgctgcacagccagaagctcctgcagcagtacctcgcgtcgaaaagc
gcggggctggcggcggcacccggccgggacggcggtggtcgcggcggctgcggcacgggc
gtcggcgtcggcggcgtcggcggcaccggcgaagtcggccaggaggcagagcgaggcccc
ggcggcgtggccctggcccaggcgagcctgctgcgcatcctgggcaccacgctggccgca
ctgcgccgattcagccccgacgtctgccagatcctgctggaccagacgatggacctgtcg
gagtacgagccgctcttctcgctgagcctggtggctccgtcgtgcgacgccgacgccagc
ccctcgctcggctcgctcctctccgcgatcagcgtcgctcagggcctcgccgcgcaggcc
gacgggaaaagggaactcgcaaagcacacaaacgccggtgacttgaaggctctgaagccc
acgctggtgttcgtgatggagaatgcgctggcgctgctcatgtcgcaggccatgctctac
ctcaagcactgcaccgtctcctgccgcgacaagcagcgcatcaagcgcgagctcagctcc
gagctggaggcgctgcagaacggaatgctgcgctgggtgcgcagaggcagccccgtgtcg
ccgggcgccggcggcggtggaagcggcgccggcggcggcagcggaggagcggcgacaggc
ggtgcaggcggcacctcggcgggggtctccctacaggccaagggcggcggcggcggcggc
agcggcggtgggcgagcgacgtcacgctccgccggcgcggcgggcggcgtggcggacgcg
tgggagcacgccttccacgacctcgtcgacctcttcctcaagagggtgctgcggtga
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