Lethenteron reissneri (Far Eastern brook lamprey): 133360271
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Entry
133360271 CDS
T09663
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj03013
Nucleocytoplasmic transport
lrj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133360271 (PNN)
03015 mRNA surveillance pathway
133360271 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133360271 (PNN)
03041 Spliceosome [BR:
lrj03041
]
133360271 (PNN)
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133360271 (PNN)
Spliceosome [BR:
lrj03041
]
Complex C
Other components
EJC/TREX
133360271 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
133360271
NCBI-ProteinID:
XP_061434890
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Position
8:5572287..5585591
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AA seq
615 aa
AA seq
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MAVEASGLREQLERARQSLHSVDENIKKLTGRDPNDLRPGPGRRLSLTGGPQGLGRGRGM
GLLRRGLSDTGLLAGMGGPPAKKRDMDGAMGRPGPERRVRRESHPESDAEDDEDVQKPAV
QSSVVNTAKERTRRDLIHDQNPDEKGRQRNRRMFGLLMGTLQKFKAEASEENEKQKRRHE
IEAKVEEQAEEERRALALERRELFEERRNQQATLRLLEVKVQLAHLQEEWDAHNQKLLPF
IRTKTKPQMFFLPAKMSPDTQKLLEESQKTLSDEFAKRRADFLEEIERMEVRPRRARIRG
RLGPTPDGDGDLGGGPPWLGEGPETEDAEGKAKMGRVGEDTDAAPVQDVEMSGGPEGEGG
QAGQEHPEQEKGSFEAKHQEEGMEEGEVGEVGERAQPEGQEVSKPEETKTPVAKEASSER
RRESDRGQRIRIVRRGPERDRGGSPDRRRDGWDRRRGAMGFGGSRSHEQGGSGGGRRRRH
SSERGRREREPVRRSPRPRSPRHARHLERGDKNETNRKVRAGSDGDKKGGHSGEGGHRGE
RRRRLSEGGARRRHSEGHRGAEAGKRLSSEGSAEKGKEAEAAGQQGDTTGEDVQMMVPAE
ETEGQEEPGTQAVES
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaggcgtcgggcttgcgcgagcaacttgagcgcgctcgccagagcctccac
agcgtcgacgagaacatcaagaagctgacgggacgcgaccccaatgacttgcggcctgga
ccgggcaggcggttgtccctcacgggtggaccccagggccttggcagggggcgaggaatg
gggcttctgaggcgtgggctctcggacacggggctactggcagggatgggcggaccgccg
gccaagaagagagatatggatggagcgatgggcaggccggggccagagcggcgggtccga
cgtgaatcccaccccgagagtgacgccgaggacgacgaggacgtgcagaagcccgcagtg
cagtcatcagtggtgaatactgccaaggagcgaacacgccgagacctcatccatgaccag
aacccagacgaaaagggacggcagaggaatcggcgaatgtttgggctgttaatggggacc
ctgcaaaaattcaaggccgaggcatcggaggagaacgaaaagcaaaagcggcggcacgag
attgaggcgaaggtcgaggagcaggcggaggaggagcggcgcgctctggcgctggagcgg
cgtgaactgtttgaggagcggcgcaaccagcaggcaacgctgcgcctgctcgaggtcaag
gtgcagctggcgcacctgcaagaggagtgggatgcacacaaccagaagttgctcccgttc
atccgcaccaagacgaagccgcagatgttcttccttccggccaagatgagccctgacacg
caaaagctgctggaggagtcgcaaaagactctgagtgatgagtttgcgaaacgacgcgcc
gacttcctggaggagattgaaagaatggaggtgcggccacgacgcgcgaggatccggggg
cggttgggtcccacgccggacggagacggggatctggggggcggccccccctggctgggg
gagggccctgagacagaggacgcggagggtaaggcgaagatggggcgcgttggagaggac
acagatgcagcgccggtgcaggatgtagagatgtcgggcggccccgagggtgaggggggg
caggcagggcaggagcatccagagcaggagaagggcagcttcgaggccaagcaccaggag
gaggggatggaggagggggaggtgggggaggtaggggagagggcccagcctgaagggcag
gaagtgagtaagcctgaagagacgaaaacaccggtggccaaggaggcgagtagcgagagg
cgcagggagagcgatcgtgggcagcgaatccgcatcgtgcggcgggggccggagcgtgac
cgggggggcagcccagacaggcggcgcgatggctgggaccggcgcaggggggccatggga
ttcgggggcagccgcagccacgagcagggcggctcgggagggggacggcggcggcgccat
agctcggagcggggacgtcgggagcgggagccggtgcggcggagcccccgcccgcgctcg
ccccgtcacgcgcgccacttggagcgcggtgacaagaacgagaccaacaggaaggtcagg
gctgggtccgacggggacaagaagggggggcacagtggggagggggggcacaggggggag
aggcggcgcaggctctcagagggcggggctcgtcgcaggcatagcgaggggcacagggga
gccgaggccggaaagcggttgtcctcggagggcagcgccgagaaaggtaaggaggcagag
gccgcagggcagcagggcgacacaacaggggaggatgtgcagatgatggtgccagcggag
gagacggagggtcaggaggagccagggacacaggcagtggagtcgtag
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