Lethenteron reissneri (Far Eastern brook lamprey): 133360939
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Entry
133360939 CDS
T09663
Name
(RefSeq) endothelial PAS domain-containing protein 1-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04137
Mitophagy - animal
lrj04140
Autophagy - animal
lrj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133360939
04137 Mitophagy - animal
133360939
04148 Efferocytosis
133360939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133360939
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133360939
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
133360939
NCBI-ProteinID:
XP_061435810
LinkDB
All DBs
Position
8:complement(9699989..9741717)
Genome browser
AA seq
835 aa
AA seq
DB search
MSADKEKKSRVNSERRKEKSRDAARCRRSNETEVFYELANELPLPHSVTSHLDKASIMRL
AISYLRMRKLLHNGAVVEDCQEEMDGLFGKALEGFVMALTEEGDMVFLSDGVNKCVGLAQ
VDLMGHSIFDFVHPCDQEEVREMLVYRQAAGKKAKEGSTERDFFMRMKCTLTNRGRTVNL
KSASWKVLHCSGHMKLYEGSAASAGGGGFREPPLVCLVMTCEPIPHPSNIEVPLDSKTFL
SRHSMDMRFTYCDERITELIGYHPDELLGRSVYEYYHALDSDHMTKSHHNLFTKGQAVTG
QYRILAKGGGYAWVETQATVIYSSRNSQPQCVVCVNYVLSGIVENDTIFSLEQTERLFKP
NKAAVAVVAAGEAASDGTDEEEDMALLYTQLKNEPDELAQLAPTAGDVVVPLDFGTGLAS
FDDVPLYNDVMMAASPEPMPSPATPTKAFAELPAAVVAVTEAGPAGDSSLTAPQHSSGPS
SPSGSPATAPSTAPNSPSDYYSAVGGDLKVDLIEKLFAVDSEIKEGSFKHDDMDLEMLAP
YIPMDGDDYQLCTLSLQDSLTLPPDGSTLSSPGQSERSSSTVDAPTPACGPTSLPPAAPQ
PPSPSLGSPEGPASPSSRHTATMPAEQANLIVTSSQSKLAPTAPPPFTMSTVHILISGTV
PVGTTLPGGVVSAIPWSGTTTTTTGAVVSAPTTIVLLQQAPRAQTVASLPSTVVVSGSDV
SLAKASLTTIASAVKRKWQTGTTGPFLQQVVINKQEGANKTQFLAELPLKRSKVSQDVEA
EALTSDLVSRLLGPTLEDITLPMLNSYDCEVNAPVQDSRTLLQGEELLKALDQLS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggataaagagaaaaagagcagggtgaactctgagcggcggaaggagaagtct
cgcgacgctgcgcgatgtcggcgcagcaacgagacggaggtgttctacgagctcgccaac
gagctgcctctcccccacagcgtcacctcgcacctcgacaaggcctctatcatgcggctc
gccatcagctacctgcgcatgcgcaaactgttgcacaacggagcggtggttgaggactgc
caagaagagatggacggcctcttcggcaaggccctggagggcttcgtcatggccctcacg
gaggagggcgacatggtgttcctgtcggacggtgtcaacaagtgtgtgggcctggcccag
gtggacctcatgggtcacagcatcttcgactttgttcacccatgtgaccaagaggaggtg
cgggagatgctcgtatacagacaagcagcgggaaagaaagcgaaggaggggagcactgag
cgagacttcttcatgaggatgaagtgcacgctcacgaaccgcgggcgcaccgtcaacctc
aagtccgcatcgtggaaggtgctgcactgcagcgggcacatgaagctgtacgagggcagc
gcggcgagcgccggcggcggcggcttccgggagccgcccctcgtgtgcctcgtcatgacc
tgcgagcccatcccgcacccgtccaatatcgaggtgccgctcgacagcaagaccttcctg
agccgccacagcatggacatgcgcttcacctactgcgacgagaggatcacagagctgatt
ggctaccaccccgatgagttgcttggccgttcagtctacgagtactaccacgccctggac
tcggaccacatgaccaagagccaccacaacttgtttaccaagggccaggccgtgacgggg
cagtaccgcatactggccaagggcgggggctacgcgtgggtggagacccaggcgaccgtc
atctacagctcccgcaactcccagccgcagtgcgtcgtctgcgtcaactacgtgctcagc
gggatcgtggagaacgacaccatcttctcgctggagcagaccgagcgtctcttcaagccc
aacaaagcggcggtggcagtggtggcggcgggagaagcggcgagcgatggcacggatgag
gaggaagacatggcgctgctctacacgcagctcaagaacgagcccgacgagctggcacag
ctcgcacccacggccggagacgtcgtggtgcccctcgactttggcacgggcctggcgtcg
ttcgacgacgttccgctctacaatgacgtcatgatggccgcctcgcccgaacccatgccg
tccccggcgacgccgaccaaggctttcgccgagctccctgcggcggttgtggcggtgacg
gaggccggccccgcgggcgactcgtccctcacggcgccgcagcattcgtccggtccgtcg
tcgccctccggctccccggcaacagctccgtccacggcgccgaacagccccagtgattac
tactcggccgtcggaggtgacctgaaggtggacctgattgagaagctgtttgccgttgac
tcggagatcaaggagggcagcttcaagcacgatgacatggacctggagatgctggcaccg
tacatcccgatggatggcgacgactaccagctgtgcacgttgagcctgcaggactcgctc
acgctgccgcccgacgggtccaccctctcctcgcccggccagagcgagcggtcatcgtca
acggtggacgctccgaccccggcctgcggccccacatcgttgccccccgccgccccacag
cccccgtcgccgtcgctggggtcaccggaaggccctgcctccccgtcaagccggcacacg
gccacgatgccggcagagcaggcgaacttaatcgtgacgagcagccagagcaagttagcg
ccgacagcgccgccgccgttcaccatgtccacggtgcacatcctcatcagcggtacggtg
ccggtcggcaccacgctgcccggcggagtcgtgtcggccatcccgtggtccggcaccacc
accaccacaaccggcgccgtcgtaagcgcgcccaccaccattgtcctgctgcagcaggcg
ccacgtgcgcagaccgtcgcctccctgcccagcaccgtcgtggtcagcggcagcgacgtg
agtctcgccaaggcgtcgctgacgacgatcgcaagcgccgtcaagcgcaagtggcagacg
ggcaccacggggcccttcctccagcaggtcgtcattaacaaacaggaaggtgccaacaag
acgcagttcctggcggagttgccgttgaaacggagcaaggtatcgcaagacgtggaagcg
gaggcacttacgtcagacctcgtcagccggctgctgggcccgactctggaggacatcacg
ctgccgatgctcaacagctacgactgcgaggtgaacgctccggtgcaggacagccgcacg
ctcctgcagggcgaggagttgctcaaggccctggaccagctgtcctga
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