Lethenteron reissneri (Far Eastern brook lamprey): 133361020
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Entry
133361020 CDS
T09663
Name
(RefSeq) putative ATP-dependent RNA helicase an3
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Pathway
lrj04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrj03019
]
133361020
03041 Spliceosome [BR:
lrj03041
]
133361020
03036 Chromosome and associated proteins [BR:
lrj03036
]
133361020
Enzymes [BR:
lrj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133361020
Messenger RNA biogenesis [BR:
lrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133361020
mRNA cycle factors
Common to processing body (P body) and stress granule
133361020
Spliceosome [BR:
lrj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133361020
Chromosome and associated proteins [BR:
lrj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133361020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
133361020
NCBI-ProteinID:
XP_061435890
LinkDB
All DBs
Position
70:complement(267966..289103)
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AA seq
470 aa
AA seq
DB search
MGEIIMGNIALTRYTRPTPVQKYAIPIIIGKRDLMACAQTGSGKTAAFLVPILSQIYLEG
PGEALLAAKDIARFGRRKQYPLALVLAPTRELASQIHEESRKFAYRSRVRPCVVYGGADI
GQQIRELERGCHLLVATPGRLVDMMERGKIGLEFTRFLVLDEADRMLDMGFEPQIRKIVE
QDVMPVKGERQTLMFSATFPREIQMLARDFLEDYIFLAVGRVGSTSENITQKVVWVEEDD
KRSFLLDLLNAAEVESLTLVFVETKRGADALEGFLYNEGYPSTSIHGDRSQRDREEALHH
FRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN
MKNSSLARDLMDLLVEAHQEVPTWLEGVAYGQQSRSGAWGGGGRGKRSGGGGAFGGRDYR
TTHGPPGGGGRKGGPSPGGGSSRGGSGSFGFSDGGSYNRSRGSSVDWWDN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaatcatcatggggaacatagcgctgactcggtacacgcggcccacgccggtg
cagaagtacgctatccccatcatcatcggcaagcgcgacctcatggcctgcgcgcagacc
ggctccggcaagacggccgccttcctggtgcccatcctgagccagatctacctggagggt
cctggagaggctcttctggccgccaaggacatagcgaggtttgggcggcgcaagcagtac
ccgctggccctcgtgctggcgcccacgcgtgagctggcctcccagatccacgaggagtcg
cgcaagtttgcgtaccgctcgcgcgtgcgcccctgcgtggtgtacggcggcgcggacatc
gggcagcagatccgcgagttggagcgcggctgccacctcctggtggccactccgggccgc
ctggtcgacatgatggagcgcggcaagatcggcctcgagttcaccaggttcctggtgctg
gacgaggctgaccgcatgctggacatgggctttgagccccagatccgtaagattgtggag
caggacgtgatgcccgtcaagggcgagcgccagaccctcatgttcagcgccaccttcccc
cgggagatccagatgctggcgcgggacttcctggaagattacatcttcctggcggtgggg
cgtgtgggctccacgtcggagaacatcacccagaaggtggtgtgggtggaggaggacgac
aagcgctccttcctgctcgacctgctcaacgccgccgaggtggagtccctgacgctggtg
tttgtggagactaagcgcggtgccgacgcgctggagggcttcctctacaatgagggctac
ccctcgaccagcatccacggggaccgctcccagcgcgaccgcgaggaggcgctgcaccac
ttccgctcggggaagtgccccatcctggtcgccaccgccgtggcggcccgtgggctggac
atctcgaacgtgaagcacgtcattaactttgacctgcccagcgacatcgaggaatacgtg
caccgcatcggccgcacggggcgcgtgggcaacctgggcctggcgacgtcgttcttcaac
atgaagaactcgagcctggcgcgtgacctcatggacctgctggtggaggcccaccaggag
gtccccacctggctggagggcgtcgcctacggccagcagagccgcagcggggcctggggc
ggtggcggccgcggcaagaggagcggtggcggaggggcgtttggcggccgtgactaccgc
accacccacggaccccccggcggtggggggcgcaagggcggccccagccccggcgggggg
agcagccgcggaggctcaggcagcttcggcttctccgatggagggagctacaacagatcc
cgtggttcctcggtcgactggtgggacaactga
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