Lethenteron reissneri (Far Eastern brook lamprey): 133361142
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Entry
133361142 CDS
T09663
Name
(RefSeq) neuronal PAS domain-containing protein 3-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrj03000
]
133361142
Transcription factors [BR:
lrj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133361142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
RNA_pol_3_Rpc31
Nop53
Motif
Other DBs
NCBI-GeneID:
133361142
NCBI-ProteinID:
XP_061435998
LinkDB
All DBs
Position
8:11014193..11215008
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AA seq
1095 aa
AA seq
DB search
MMLRLYPELACEGPTDEADCPQPAEGHSNGGMGAPPACHAPGSYQQRLQALRKEKSRDAA
RSRRGKENFEFYELAKLLPLPGAITSQLDKASIVRLSISYLRMRDFAGLGDPPWLDACES
PPPNTSVKAIGQRPQRAIPSAIEAFEKHLGSQILQALDGFVLVLNQEGRFLYISETVSIY
LGLSQVELTGSSAFEYVHPADHAELAEQLGLRLPGAAASRGAAPTRRRRPGALLALSDSE
APAPKAATAGRRGGRRRRRRATRGRPGSRHRRSARERVKADSAEEEEEVEEDDDDDDCGD
DASLVDSPPPSPPETPDTGKLDSPASPSSLAAAAASASDCVLERSFFIRMKSTLTKRGVH
IKSSGYKVIHLAARLRRRSSSSGGGGGGGQAPASPASPCPSPPVEHPLLGLVAVAHALPP
PTLSEVRIDCHMFVTKLNLELRVSYCESRISDYMDQTASDIVGKSCYHLIHTEDVAALRL
SHLDLINKGQCITNYYRWLQKCGGYIWVQSTATITINSKNADEKTVVSVNYVLSNLEMKG
CILDLQQMPSLAEQTTEISTSDSETEAKEENNEPLRCVDGRLGIIENSVIMEPIRKATTI
SRTDPGHTHSIQQQQQPPARICQSSREDNMKNDSSSDNLDDDDDEDDDDDDDDDDDEDSD
AQSDSSDLYEGPKVTEQPRRTVLSRGVKTQRQRRLRNSDRHTEAKATEGQSMSSDSDRDS
IDGCDRLEVSKSRMQTSSRLRKRRKRSLRDRSIVGPRKWTLDVSRADKVESPLPAAVHLV
TPSLDFERLPKFRLEVSPRSADGIAPSWACLPNREILRGDSDFSMVAEQLNSSSVHSSQT
AHILNEDIPESVLASPETDEVADEKEEGGQQRPQSVNDASPGSPSATGSTAASRHRQPSP
PLPLSPPVASVASLLYTAGELELLQRLQQQAGLVLPLAAAAAAASASAQPRVYTTGTIRY
APGGDAPAAGVGGAAQAPGSDAGAAAGPHALRPAPPFNLIELNSAALRLDPKASADVIYQ
HVQRMGAAAAAAAAAAAAAAQAGGVLSADQLPLGAATTAAAAGGVITTAEGLFSGLAFPV
YTISLQPAQAERKDE
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcaggctctacccggagctcgcttgcgagggccccacggacgaagctgattgc
ccgcagccagcggaggggcactccaacggagggatgggggcccctccggcgtgccacgct
ccgggctcctaccagcaacggctgcaagcgttgcgcaaggagaagtcgcgcgacgcggcg
cggtcgcgacgcggcaaggagaactttgagttctacgagctggccaagctgctgccgctg
ccaggcgccatcacgagccagctggacaaagcctccatcgtgcgcctctccatcagctat
cttcgcatgcgagacttcgccgggcttggcgaccctccctggctcgacgcctgcgaatcc
ccgccgcccaacacttcggtcaaagcaattggccagaggcctcaaagagccatcccatca
gcgatagaagcctttgagaagcatctgggaagtcagatactacaggcacttgatggattt
gtgttggttctcaaccaagaaggaagattcctgtacatctcagaaaccgtctctatatac
ctgggcctttcgcaggtggaactgacggggagcagcgcgttcgagtatgtccaccccgcc
gaccacgccgagctcgccgagcagctcggcctgcggctccccggggcggcggcgtcccgc
ggcgcggccccgacgcggcgccgccggcccggggccctcctcgcgctctccgactcggag
gccccggccccaaaggccgccaccgccgggaggagaggaggccggaggaggaggaggagg
gcgacgaggggccgccccgggagccgccaccgccgctcggcaagggagagggtcaaggcc
gactcggcggaggaggaggaggaggtggaggaagacgacgacgacgacgactgcggcgac
gacgcgagcctcgtcgattctccgccgccgtctccgccggaaactcccgacacaggcaag
cttgattctccggcctcgccgtcgtccctcgccgccgccgccgcctccgcctccgattgc
gtcctggagcgatccttcttcatccgaatgaaatcgacgctcaccaaacgaggcgtgcac
atcaaatcctccggctacaaggtcatccacctggccgcccggctgcggcgacgcagcagc
agcagcggcggcggtggtggcggcgggcaggcgccagcctcccccgcgtccccgtgcccg
tcaccgccggtcgagcaccccttgctgggcctggtggccgtggcacacgcgctgccgcct
cccacgctcagcgaggtgcgcatcgactgccacatgttcgtcaccaagctcaacctcgag
ctgcgcgtctcctactgcgagagcaggataagcgactacatggaccaaacagccagcgac
attgtgggcaagagttgctaccacctgatccacacggaggatgtggcggcactgcggctc
agccacttggatctgataaacaagggacagtgcatcaccaactactaccgatggctgcag
aagtgcggtggctacatctgggtgcagtccaccgcgaccatcaccatcaacagcaagaac
gcggacgagaagacggtcgtgtcggtgaattacgtgctcagcaacctggagatgaaaggg
tgcattttggatcttcagcagatgcccagccttgctgaacagaccacggaaatatcaacc
tctgactcagagacagaggcaaaagaagagaacaacgagccgttgagatgcgtggatggc
cgcctcgggatcatcgaaaacagcgtcatcatggagcccattcggaaagccacgacgata
tcacggacggacccaggccatacccactcgatacagcaacagcagcagccacctgcccgc
atttgccaaagctcacgtgaagacaatatgaaaaacgacagcagctcggacaaccttgac
gatgacgatgatgaagatgacgacgacgacgatgacgacgacgacgatgaagactcggac
gcccagtctgacagctccgatctgtacgaggggccaaaggtcacggagcaacccagaagg
actgtcctgtcccgaggcgtcaaaacccagcggcaacggaggctgagaaattccgatcgg
cacacggaggcaaaggctacggagggccaatcgatgtcatcggacagcgaccgggactcg
attgatggctgcgacaggctggaggtgtcaaagagcaggatgcaaacctccagccgactc
aggaaacgacggaagcgatccctgagggacaggagcatcgtaggccctaggaagtggacg
ctggacgtctcgcgggcggataaagtcgagtcgccgctgcccgccgccgtgcacttggtg
acgccgtcgctggacttcgaaaggctgccgaagttcaggctggaggtgtccccgcgctcg
gccgacgggatcgccccatcctgggcgtgcctgcccaaccgcgagatcctccgcggcgac
tccgacttcagcatggtggccgagcagctcaactcgtcgagcgtccactcgagccagacg
gcgcacatcctcaacgaggacatccccgagagcgtgctcgcgtcgccggaaaccgacgag
gtcgccgacgagaaagaggaaggggggcagcagcggccgcaatcggtcaacgacgcctct
cccggctccccgtcggcgaccggcagcaccgcggcgtcccggcaccggcagccgtcgccc
cctctgcccctctcgccgcccgtggcgagcgtcgcctccctgctgtacacggcgggcgag
ctggagctgctgcagaggctccagcagcaggccggactcgtgctgccgctggccgcggcc
gccgccgccgcgtcggcctccgcgcagccgcgcgtctacacgacgggcacgatccgctac
gcgccgggcggcgacgcgccggcggcgggagtcggcggcgccgcacaggctcccggctcc
gatgccggcgcggccgccgggccgcacgccctgcggccggcgccgccgttcaacctcatc
gagctgaacagcgccgcgctccggctcgaccccaaggcgtcggccgacgtcatttaccag
cacgtgcagaggatgggcgccgcggccgccgccgccgcggccgccgcggcggccgcggcg
caagcgggcggggtgctgtcggccgaccagctgccgctcggagcggctacgacggcggcc
gcggcgggcggggtcatcaccacggcggagggcctcttctccggcctagcgttcccagtt
tacaccatcagcctgcagccggcgcaggccgagcgcaaagacgaatga
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