Lethenteron reissneri (Far Eastern brook lamprey): 133361968
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Entry
133361968 CDS
T09663
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 3-like
KO
K16506
protocadherin Fat 1/2/3
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrj04147
]
133361968
04515 Cell adhesion molecules [BR:
lrj04515
]
133361968
Exosome [BR:
lrj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133361968
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Cadherin related
133361968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
wnt
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
133361968
NCBI-ProteinID:
XP_061436926
LinkDB
All DBs
Position
Unknown
AA seq
2327 aa
AA seq
DB search
DVNDNPPQASRPWYQASVAENSDGGVRVVQVDAWDLDNVGARSRGLAFNIVSGDPQGFFT
INRTTGVIRTSSSSRRLDREKQAEHELEVSIVDGGTPPREARVAVTLSVSDENDNAPRFH
RNLTRVYAVAATEPKAVAIARVYAADADRDGNGAVSYTVRGWHNDYYSDEHGVVYSKINS
HRAGTFHSILVQARDQGEPPTLSSTATIQVEWISNPRPPKKPATFARSRHAVTVVETAAV
GSVVIALSTQTTGTLLWFSITGGDVERRFHVTEHGGVVEVAKPLDAERFSSYQLTVALTD
GTNASTTLVVVTVQDVNDHRPRFSRDLYEATATEEEEASASTAPILRLEATDADVTARLS
FFLVGLGGGDAVESLRRFRVDHVTGEVTAAERLDREAKRSHVLTVMQVQNGRVPVRRAYA
TVTVSVDDSNDHAPVFAGGPYEALVAESAAVGSAVVRVVALDRDEGPNTDVSYSIRHGNV
GKSFTVHRTRGVISVARKLDGSAVEAYELVVRAGDKGRPRRFTNTTVRVVVVAAAAVYGT
RPKFASGGVGYSAEIAEGAAPGSVVLAVGTSGWSMVTFEILEGDSQGTFDIHPTSGVIAT
KRPLDRERTPSYRLTVRATDAASLSADASVSIGVLDENDNAPVFERPRYRGAVGEEAPAG
TAVTDPDGAPLVVRAADADDGEGRATVAYQIVEHEARKFFSVHPHTGAVRTAGALDRETT
AEFRFRVAALDGGSPSLSSEVPAEVTVAVLDANDCPPAFSTAAYETALHVPTRAGVRLLT
LEAHDPDVGAALTYRVASGNVGGAFAVDERTGDVAVRNSSLLAAGYELGVEVSDGRFLSA
ARVKVSVWVVGGRLRVPPKYSVRVLENAAAVDVVATVVATGGDLDEPLAFRLLSPSGAFR
MRRRAGVLETTGVAFDREERDRYELLVEVRGGSRARPDVAHTTVEVHVEDVNDNAPAFVG
LPYRAVVVATAAPWSAVLTVAALDRDVGENARVRYSLRDDHDGRFHISPSGGDVSLTKSF
TPDESGKDFVVTVVATDSGTPRLSSAVDVTVTVLAADAPAFESPSYVAWVPEDVGPPAPI
AHVRATAPEGLPLVFSIVNGDPFDQFSVDFVTGVVSVVGPLDHETRAAHRLTVRAASLAT
GSHADASLDVIVGDVNDNRPFFAQGTYAAMLFESAPPGTSVVHARAVDVDAGSDRALRYE
IVDDGEKGGEGFYVDPDSGLVVTTAFLDYERSRLRRFSVRATDGGEPPLASDVMVIVAVK
NENDNAPLFERPLYEVSVGSLAWPGNFVAALRAFDADVSDAYRLRYAIVSGDDDPANFAI
DAETGVVSVAARPQKKPAARYHLRVSATDGAFVADAMVVVDERPANRHDPTFGRAQYVAK
IPENSEAGTPVASVRATDADAGAFGQVSYSIANRFARDHFAIDESGRIFARAPLDREDPL
QRAVDICVKAWDGGGRAAFVTVKVVVTDENDNAPRFIAAEYSGGVASSAAKRTLVLRVTA
TDRDEGINAAVVYSLRKGQDPDASEDVLEVEPLTGRVFTKGGGLAGLEGSRLSFFIVAVD
GGGRSAAVPASVSVLPAGSAAPAFAEAAYELTVAEDAAVGSEVGAVAAALAGDEIAAYAA
VAGSGGAVADGGAFAVVAGDGRIVVARALDREATGSHRFEVRATWRRGGADVTAQVPVTV
RVENVEDNMPAFESSTYEATVLENLPAGVLLVQVRATDRDGGARPLYNLVEPLESDAGGA
ESLFTVDADSGWVSTRSRLDCEARDRHHLLVEAFDPARPERAPAVAEVIVTVNDDNDHPP
RFSAPLIDVRVPEDAVPGLALAVIQADDADATPQNRNLTYHLTGGDPLGHFSLGPDKSGG
KWRLRLERPLDREKQERYHMLVKAADGTFTRTVVVAVTVLDVNDNRPLCDKLWYNITVPE
DIAQQVFLLSVSARDSDSGSNGTVRYSLHGAGATLFRLDPVSGKLFTLAPLDHEASPAHA
LGVIATDGGGLSCRVEILVRVGDLDDSAPHFPVGSPRAVALHWSDANVGMVVTSMHAVDS
DLGPHRRVTHSLLNSAGDRFAIDGRSGIITVKRLLERRAVYNLTVQARSGGGVSLMPPPT
TAVIFVSLHDDDRGVAAAPAFRRLAYRAAVPEDAAPGTAVIAVEAVLSGGGAVSYGIASG
NELGAFDVDRKLGVITVVAKALDYEKRRHHYLTVWAAAADDDAAASPSAVTVVTVDVTDV
DDGAPRFARGSXSAVVGEDALPATSFAVSASVEWSGDGSRDSVLATAGMWVASRPMRKMC
LRRLDHVHAVVQGVRLALHECRDQFKGKRWDCTAPGAENAPDPTAES
NT seq
6982 nt
NT seq
+upstream
nt +downstream
nt
gacgtgaacgacaaccccccgcaggcgtcgcgtccgtggtaccaggcctccgtggcggag
aactccgatgggggcgtccgggtggtgcaagtggacgcctgggacctggacaatgtgggt
gcccgcagcaggggcctcgcgttcaacatcgtcagcggagacccacagggattcttcacc
ataaaccgcacaacaggcgtcatccgcaccagcagcagcagcaggcggctggacagagag
aagcaggcggagcacgagctggaggtgtccatcgtggacggcggcacgcccccgcgtgaa
gcgagggtggcggtgacgctgagcgtctccgacgagaacgacaacgccccacgcttccac
cgcaacctgacgcgcgtctacgccgtggcggcaacggagcccaaggcggtggccatcgca
cgcgtctacgctgccgacgccgaccgggacggcaacggcgcggtgtcgtacaccgtccgc
gggtggcacaacgattactactccgatgagcacggagtcgtctacagcaagatcaactct
caccgtgcggggacattccactccatcctggtccaagccagggaccagggagaaccgcca
accttgtcgtcgacagccaccatccaagtggagtggatctccaatccccggccgccgaag
aagcccgcgacctttgcccggagccggcacgcggtcaccgtggtggagacggccgccgtg
gggtccgtggtgatcgccctgtccacgcagaccacggggacactcctctggttcagcatc
acaggcggcgacgtggagcgcaggttccacgtgacggagcacggcggcgtggtggaggtg
gccaagccgctggacgccgagcggttctcctcctaccagctgaccgtcgcgctcactgac
gggaccaacgcttcaaccaccctggtggtggtgacggtgcaggacgtgaatgaccaccgg
ccccgcttctcccgtgacctctacgaggcgaccgccacggaggaggaggaggcgtctgcc
agcaccgccccgatcctgcggctggaggcgactgacgccgacgtcaccgcccgcctctcc
ttcttcctcgtcggcttgggcggcggtgacgcggtggagagccttcgtcggttccgcgta
gaccacgtcaccggcgaggtcaccgccgccgagaggctggaccgagaggcaaagcggagc
cacgtgctcaccgtcatgcaggtgcagaacggcagggtccccgtgaggcgagcgtacgcc
acggtgacggtgagcgtcgacgattccaacgaccatgcgcccgtcttcgccggcggcccc
tacgaggccctcgtggcggagtcggcggccgtgggctccgccgtggtgcgcgtcgtggcg
ctggaccgcgacgaaggccccaacaccgacgtcagctacagcatcagacatggaaacgtg
gggaaatctttcaccgtccaccgcacgcggggcgtcatctccgtggcgaggaagctggat
ggctctgcggtggaggcctacgagctggtggtgagggcgggggacaaggggcgcccgcgc
cgcttcaccaataccacggtccgcgtcgtcgtcgtcgccgccgccgccgtgtacggcacc
cgccccaaattcgcctccggcggagttggctactcggcggagatcgccgaaggggccgcg
cccgggagcgtcgtgctcgcggtcggcacctccggctggtcgatggtcacctttgaaata
ttggagggcgattcccaaggcaccttcgacatccacccgacgtccggggtcatcgccacc
aagcgaccgctggaccgcgagcggacgccgtcgtaccggctgacggtgcgggccacggac
gcggcgagcctctcggcggacgcgtcagtgtcgatcggcgtgctcgacgagaacgacaac
gcgcccgtcttcgagcgcccgcgataccgcggcgccgtcggcgaggaggcgccggcggga
accgcggtcacggaccccgacggcgccccgctcgttgtccgggccgctgacgcggacgac
ggcgaggggcgcgcgacggtcgcctatcagatcgtggagcacgaagccaggaagttcttc
tccgttcacccgcacacgggggccgtcaggaccgccggcgccctcgaccgcgagacgacg
gccgagttccgcttccgggtggctgcgttggacggcggcagcccgagtctgtcctctgag
gtgccggccgaggtgaccgtcgccgtgctggacgccaacgactgccccccggcgttctcg
acggccgcgtacgagacggcgctgcacgtgccgacccgcgccggcgtccgcctgctgacc
ctggaggcccacgacccggacgtcggcgccgcgctgacctaccgcgtcgcctcgggaaac
gtcggaggcgcattcgccgtcgacgagcgcaccggggatgtcgcggtgaggaactcctcc
ctcctcgccgccggctacgagctcggggtcgaggtgtccgacgggaggtttttgagcgcc
gcgcgggtgaaggtctccgtgtgggtggtcggcggcaggctgcgggttccgccaaagtac
tctgtgcgcgtgctcgagaacgccgcagcggtcgacgtcgtggccacagtcgtcgcgacg
gggggagacctcgacgagccgctggctttccgcttgctcagcccgagcggcgcgttccgg
atgaggcggagggcgggcgtcctggagacgaccggcgtcgcgtttgaccgtgaggagcgc
gaccgctacgagctgctggtggaggtgaggggcggctcccgggcgcgcccggacgtcgct
cacacgacggtcgaggtgcacgtcgaagatgtgaacgacaacgccccggcgttcgtcggc
ctgccgtaccgcgccgttgtcgtggcgaccgcggcgccgtggagcgccgtgctcaccgtc
gcggccctcgaccgggacgtcggcgagaacgccagggtgaggtactcgttgagggacgac
cacgacggccgctttcacatcagcccttcgggcggcgacgtctcgctgacgaagagcttc
accccggacgagtcgggcaaggacttcgtcgtgaccgtcgtggcgacggacagcgggacc
cctcggctgtcgtccgcggtcgacgtcacggtcacggtgctcgctgcggacgcgccggcg
ttcgagagcccctcctacgtcgcgtgggtgcccgaggacgtcgggccgcccgcgccgatc
gctcacgtccgcgcgacggccccggagggcctgcctctcgttttctccattgtcaacggc
gaccccttcgaccagttctccgtcgacttcgtcacgggcgtcgtgagcgtcgtcggcccg
ctggaccacgagacgcgggccgcccaccgcctcacggtgcgagccgcctccctggcgacg
ggctcgcacgccgacgcgagcctggatgtcatcgtcggggacgtcaacgacaaccggccg
ttcttcgcgcagggaacctacgccgccatgctgtttgaatctgcgcccccggggacctcc
gtcgtccatgcgagagctgtcgacgtcgacgccggctccgaccgggcgctccgctacgag
atcgtggacgacggggagaagggcggcgagggattctacgtagaccccgacagcgggctg
gtcgtgaccacggcgtttctggattacgagcgaagccggcttcgtcgtttctcagtgagg
gcgacagacggcggcgagcctccccttgcatccgatgtcatggtgatcgtcgccgtcaag
aacgagaacgacaatgcgccgttgttcgagcggccgttgtacgaggtgtccgtgggcagt
ctagcttggcccgggaacttcgtggccgcgctgagggcgtttgatgctgacgtgtcggac
gcctaccggctgcggtacgccatcgtctccggtgatgacgaccccgcgaacttcgcaatc
gacgccgaaacgggcgtcgtctccgtcgccgcccgccctcagaagaagccggccgctcgc
taccacctccgagtctccgccacagatggcgcattcgtcgccgatgccatggtagtggtt
gacgagcggcccgccaaccggcacgaccccaccttcgggcgggcccagtacgtggccaag
atccccgaaaactccgaagcaggaactccggtggcctcggtgcgggccacggacgccgac
gcgggcgcttttgggcaagtatcgtactccatcgcgaaccggttcgcccgcgaccacttc
gccatcgacgagagcgggcggatcttcgcgagggcgcccctcgacagggaagaccctttg
cagagggccgtggacatctgcgtcaaggcctgggacggtggaggcagggcggccttcgtc
acggtcaaggtggtcgtgacggacgaaaacgacaacgcgccccggttcattgccgccgag
tactcgggcggcgttgcgtcgagcgccgccaagagaactctggtcctgcgggtcaccgcc
acggaccgcgacgaggggatcaacgcggcggtcgtctactcgctccggaaggggcaggac
ccggacgcctccgaggacgtcctggaggtggagcccctgacgggccgcgtcttcaccaag
ggcggcggcctcgccggcctggagggctcacggctgtcgttcttcatcgtggcggtggac
ggcggcgggcgctccgccgccgtccccgcctcggtctctgtgctgcccgccggctcggcg
gcgccggccttcgccgaggcggcctacgagctgacggtcgcggaggacgcggcggtgggg
agcgaggtcggcgcggtggcggccgcgctggcgggcgacgagatcgccgcgtacgccgcg
gtggccggcagcggcggcgcggtggcggacggcggcgcgtttgcggtggtcgccggcgac
gggcggatcgtggtggcgagggcgctggaccgcgaggccacggggagccaccgcttcgag
gtgagggccacgtggcggcggggcggagccgacgtcacggcgcaggtcccggtgacggtg
cgcgtggagaacgtggaagacaacatgcctgcgtttgagtcgagcacctacgaggccacc
gtgttggagaacctaccggccggggtgctgctcgtgcaagtgagagcgacggaccgagac
ggcggtgcccggccgctgtacaacttggtcgagccgctggagagcgacgccggaggagcg
gagtcactcttcacggtggatgccgacagcggctgggtgagcacgcggagccggctggac
tgcgaggcccgtgaccggcaccacctcctcgtcgaggctttcgacccggcccgccctgag
cgcgcaccggccgtcgccgaggtgatcgtcaccgtgaacgatgacaacgaccaccctccg
cgcttctcggccccgttgatcgacgtccgcgtgccggaggatgcggtgcctggcctggcg
ttggccgtcatccaggcggatgacgcggatgccacgccgcaaaaccggaatcttacgtac
cacctgacaggcggcgacccgctgggccacttctccctcggtcccgataagagcgggggc
aagtggcggctgcgtctggagcggccgcttgaccgggagaagcaggagcgctaccatatg
ctggtgaaggccgctgacggcaccttcacgaggacggtcgtcgtggccgtcaccgtgctg
gatgtcaacgacaaccgccccctgtgtgacaagctgtggtacaacatcactgtaccggag
gacatcgcccagcaagtcttcctgctgagcgtttcagcccgtgactccgattccggctct
aacggaaccgtcagatactcgctgcatggtgccggagcgacgctcttccgcttggacccc
gtcagcgggaagctcttcacgctggcgccactggaccacgaggcctccccggcccacgcg
ctcggcgtgatcgccaccgacgggggtggcctctcctgccgggtggagatcctcgtgagg
gtgggggacctggacgactcggccccgcacttccccgtggggtcaccccgtgccgtcgcc
ctgcactggagcgacgccaacgtggggatggtggtgacgagcatgcacgccgtcgactcc
gacctgggcccccaccgcagggtcactcactctctgctgaactctgccggcgaccgcttt
gccatcgacggccgctcgggcatcatcaccgtcaagcgtctgctggagcgccgtgccgtc
tacaacctcacggtgcaggcccgcagcggtggaggagtctcgctgatgccgccccccacc
accgccgtgattttcgtgtccctccacgacgacgaccgtggcgttgccgccgccccggca
ttccggcggctggcctaccgcgccgccgtgccagaggacgcggcaccgggcaccgcggtc
attgccgtggaggccgtcttgagcggggggggcgcggtgagctacggaatcgccagcggc
aacgagctcggggcattcgacgtcgaccggaagctcggcgtgataaccgtcgtggcgaag
gccctggactacgagaagcgccgccaccactacctgacggtgtgggcggccgccgccgac
gacgacgccgccgcctcgcccagcgccgtcaccgtggtgaccgtggacgtcactgacgtc
gatgacggcgctccgcggttcgcccggggctcgtaaagcgctgtcgtcggggaagacgcc
ctgcctgccacctccttcgccgtttcggcatccgttgagtggagcggcgacggcagcagg
gacagcgtccttgccacggccggcatgtgggtggcgagtcgaccgatgcgcaaaatgtgc
ctgcgccgcctggaccacgtgcacgcggtggtgcagggcgtccggctggcgctgcatgag
tgtcgcgaccagttcaagggcaagcggtgggactgcaccgcgcctggcgcggagaacgcg
ccggaccccacggccgagtcgg
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