Lethenteron reissneri (Far Eastern brook lamprey): 133362122
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Entry
133362122 CDS
T09663
Name
(RefSeq) protocadherin-10-like
KO
K16499
protocadherin delta 2
Organism
lrj
Lethenteron reissneri (Far Eastern brook lamprey)
Brite
KEGG Orthology (KO) [BR:
lrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lrj04515
]
133362122
Cell adhesion molecules [BR:
lrj04515
]
Cadherins
Protocadherins
133362122
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
133362122
NCBI-ProteinID:
XP_061437061
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MDPLGAALVCLCCAVTVAASARRSPPAPPRYSVREEEPPGTLVGKLARDLGLTAEQFRAR
RFRALRGTNGSDYLAVSADSGEVWVRQRLDREAACRRASAAGSGCSLLLGAVLERPAELV
RVVVDVLDVNDHAPRFPAESALLEVAESAAVGTRFALDGARDPDAGANALRGYAMEPDDG
AFALETRDGGGGALSPVLVVRRALDRERRAAHEYVLTALDGGRPPLSGTVLLTVRLLDTN
DNAPAFERPVYRALVPEDAPAGTLVARLHAWDPDDGANGEVEYAAMLGAHETARTLFAVD
SRSGLVTLVGALDHEEADSHEMHVRARDRGPDSVPAYATVLVRVLDVNDNAPVVRLLGPT
GDAAADSAAAVVGVSRGASPGHVVAFVRIRDRDSGANGRVTCTLEGASAAGPGAAPPFAL
RAWDGGEVYALATATRLDRGATAAAEYNLTVVARDDGAPPLVSVKTFTVRVTDTRPEGRL
PDDDGGDDDGDGDDAFATPFVTDARPEGRLPDDSDGDDGDDGDGAFATPFVAVVALAVAS
CVLNVAAVAVVLRCKRENKELRTYHCGAAARARTPARDEPGAAARSGGEAASATAPNAYE
DKSFLPSEAAGAATPALGKPPRRHPLRRVPGRHDLTQGNDNFNRQQQQQTSGRGLAVSWS
PTIDCSSSPEGDGDGRSEALDRSSPCRTPNLNGVEGRPGGDGGGACREGVDVAVATGDGQ
RPRGRPPPRPPTLSTIGEEDSEHGAPTPSAGRRHQPLAAASILAEISSSGGA
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatcctctcggcgccgccctcgtctgcctgtgctgcgccgtcaccgtcgccgcctcc
gcccgccgctccccgccggcgcccccgcgctactcggtccgcgaagaggagccgccgggg
acgctggtggggaaactggcccgcgacctgggcctcaccgccgagcaattccgagcgcgc
cgattccgagcgctgcggggcaccaacggctccgactacctcgccgtgagcgccgacagc
ggcgaggtgtgggtgcgccagcgcctcgaccgcgaggccgcgtgccgccgggcgagcgct
gctggctcgggctgctccctgctgctcggcgccgtcctggagcggcccgccgagctggtg
cgcgtcgtcgtcgacgtgctggacgtcaacgaccacgcgccgcgcttcccggccgagagc
gccctcctcgaggtcgccgagagcgccgcggtcggcacgcgcttcgcgctggacggcgcc
cgcgaccccgacgccggcgccaacgcgctgcggggctacgccatggagcccgacgacggc
gccttcgccctggagacgcgcgacggcggcggcggcgctttgtcgcccgtgctggtggtg
cgccgcgccctggaccgcgagcgccgggccgcgcacgagtacgtgctcaccgcgctggac
gggggccgcccgccgctcagcggcacggtcctgctcaccgtgcgcctcctcgacaccaac
gacaacgcgcccgccttcgagcggcccgtgtaccgggcgctggtgcccgaggacgcgccg
gcgggcacgctggtcgcgcggctccacgcgtgggacccggacgatggcgccaacggggag
gtggagtacgcggcgatgctgggggcgcacgagacggcgcgcaccctcttcgcggttgac
tcgcgctcgggcctagtcaccctcgtgggggccctggaccacgaggaggccgactcccac
gagatgcacgtgcgggcgcgcgaccgggggcccgactccgtccccgcttacgccacggtg
ctggtgcgcgtcctggacgtgaacgacaacgcgcccgtcgtgcggctgctcggcccgacc
ggcgacgccgcggcggactccgcggccgccgtcgtcggcgtgtcccggggggcatcgccc
ggccacgtcgtggccttcgtccgcatccgggaccgagactcgggcgccaacgggcgcgtg
acctgcacgctcgagggcgcgtcggccgcggggcccggcgcggcgccgccgttcgcgctc
cgcgcctgggacgggggcgaggtgtacgcgctggcaacggcgacgcggctggaccgcggg
gcgaccgccgccgccgagtacaacctgacggtggtggcgcgggacgacggagcgccgccg
ctcgtgtcggtcaagacgttcacggtgcgcgtcacggacacgcgccccgagggccggctc
ccggatgacgacggcggggacgacgacggggacggggacgatgccttcgcgacgccgttc
gtcacggacgcgcgccccgagggccggctcccggacgacagcgacggggacgacggcgac
gacggcgacggcgccttcgcgacgccgttcgtcgcggtcgtggcgctggccgtggcgtcg
tgcgtcctgaacgtggccgcggtggcggtggtgctgcgctgcaagcgggagaacaaggag
ctacgcacctaccactgcggcgcggccgcccgggccaggacgccggcgcgtgacgagccg
ggggcggccgcccgctccggcggcgaggcggcatccgccaccgcgcccaacgcctacgag
gacaagtccttcctgccctcggaggcggcgggcgcggcaacgccggcgcttggcaagccc
ccgcgtcgccaccctctgcgccgtgtgcctggccggcacgacctcacacagggcaacgac
aatttcaatcgacagcagcagcagcagacgtctggaagaggccttgctgtttcttggagc
ccaacaatcgactgcagcagcagtccagaaggtgacggtgacggccggtccgaggctctg
gaccgctcgagcccgtgccggacgcccaacttgaacggagtcgagggtaggcccggcggc
gacggcggcggcgcttgccgcgagggcgtcgacgtggccgtggcgacgggcgacggacaa
cgcccccgcgggcggcccccgccgcgcccccccacgctctccacgatcggcgaggaagac
tcggagcacggggcgcccaccccgagcgccggccggcgccaccagccactcgccgccgcg
tccatcttggcggagatcagctcgtcgggaggagcg
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