Lacticaseibacillus rhamnosus Lc 705: LC705_01021
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Entry
LC705_01021 CDS
T00990
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl03030
DNA replication
lrl03430
Mismatch repair
lrl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC705_01021 (dnaQ)
03430 Mismatch repair
LC705_01021 (dnaQ)
03440 Homologous recombination
LC705_01021 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrl03032
]
LC705_01021 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lrl03400
]
LC705_01021 (dnaQ)
Enzymes [BR:
lrl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC705_01021 (dnaQ)
DNA replication proteins [BR:
lrl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC705_01021 (dnaQ)
DNA repair and recombination proteins [BR:
lrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC705_01021 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
CAR89860
LinkDB
All DBs
Position
complement(1012682..1013224)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNRVVDSFYTLINPQMQFDPQNIRIHGITPDMV
QDQPTFDRVWPHIQMFYTPGRIVTAHNAPFDVSVLRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALKIPLEHHHNALADSYACARILIAENEHFGEAQTKAMMKLAKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggattttattgcgatggattttgaaacggcaaatcgcaaacgggcttcggcttgctcg
cttgccttagtcgtcgtgcaacaaaatcgagttgttgacagtttttacacactgatcaac
ccgcagatgcaatttgacccgcaaaacattcggattcacgggattacacctgatatggtt
caagaccagccgacttttgatcgggtttggccgcatattcaaatgttttatacgcctggt
cggattgtcaccgcccacaacgcaccgtttgacgtttccgtattgcgcttgacacttgat
cgctatggcattgccgcgccacgctatcaggtcattgatacggttaaaacatcacggcag
tttttaccaaagttaccgaatcatcgtttggatacagtcagtgctgcactcaagattccg
cttgagcaccatcacaacgccttagcggacagttatgcgtgtgcaagaatcctcattgcc
gaaaatgaacattttggcgaagcgcagactaaagccatgatgaagttagctaaagcaggc
tga
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