Lacticaseibacillus rhamnosus Lc 705: LC705_01094
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Entry
LC705_01094 CDS
T00990
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl03420
Nucleotide excision repair
lrl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC705_01094 (pcrA)
03430 Mismatch repair
LC705_01094 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrl03400
]
LC705_01094 (pcrA)
Enzymes [BR:
lrl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC705_01094 (pcrA)
DNA repair and recombination proteins [BR:
lrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC705_01094 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LC705_01094 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAR89933
LinkDB
All DBs
Position
1077000..1079252
Genome browser
AA seq
750 aa
AA seq
DB search
MVMDAALKGMNDKQAEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKNVNPWNILAI
TFTNKAAREMRERVGKLVDPEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISGAKNELIDPQTYSDEQANSPFTKTVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDPETLGFYQRKFRYIHVDEYQDTNEAQYRLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANDVI
KNNLNRQAKTLWTENATGDKITYYRAQSETDEAIFVIRRIEAEMAEHHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPDDDMSFNRIVNEPKR
GIGNTSVAKLEAFANQHDWSLLEAAANAELSPISGKARGNLAQFGKMIQRLGQRRKDLNV
TEMMQAILDDSGYLGTLRAANTLEAETRVENLEELLSVTQGFDARYQPENEDSDIFVDFL
AELALLSDQDEVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAMDEGELEEE
RRLAYVGITRAKQKLYLTNAYARMLYGQRQNNPASRFIEEIDPELLDISGAAQPKSDIPF
INRTDRAFSSPYSRHPETTGTPVTVKPAPTTGAGKTSWEAGDKVEHRKWGIGTVVKVTGT
GDDQELDIAFKAMGIKRLLAAFAPIKKVEA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaggcagaggcggtgttagcc
actgaaggaccggttttgattatggcaggggccggttctggcaagacgcgggttttgacc
caccgaattgcttatttagttgaagaaaaaaacgttaatccatggaacattcttgccatt
acgtttacgaacaaggctgcgcgggaaatgcgggaacgggtgggtaaactggtcgatcct
gaaattgcccgcgatatttgggtttcaacgttccacgcattgtgtgttcgtattttgcgg
cgcgacattgacaaactcggttacaatcgggcgtttacgattgctgatccagccgaacaa
ctcactttggttaagcacattttggctgacttcaatctggatcccaagcgttatgatcct
aagtcgattcttggcgcgatttcgggtgccaaaaacgaactaatcgacccgcaaacttac
tcagacgagcaggccaacagcccatttaccaaaactgtggcccaagtttacgcggaatat
caaaaacgcctgcgcagtgatcaggcactggactttgatgatctcatcatgcagaccatt
gtgttatttgaaaaggatcccgaaacgctcggcttttaccagcgcaaattccggtatatt
cacgttgatgagtatcaggatacgaacgaagcccaatatcgcctcgtgcatatgctggcg
gaaggttatcacaatctgtgcgtggtcggggatgccgatcagagtatttacggttggcgc
ggcgctaatatgcaaaacattctggactttaaaaaggattaccctaaagcccaagtcatt
ttgcttgagcagaattatcgctcaaccaagacaatcctgagtgctgccaatgatgtgatt
aaaaacaacttgaatcgccaggccaaaacgttatggacggaaaatgccaccggcgacaag
atcacgtattatcgggctcaaagcgaaaccgatgaagccatttttgtgattcgccgcatt
gaagcggaaatggcagaacatcaccgcaagtacggggactttgcgattttatatcggaca
aacgcccaatcccgtgcgattgaagaagcgttcgtgaagtccaacattccttataaaatg
gtgggcggacataaattctatgatcgtaaggaaattcgcgatgccttggcttatttccgg
ttggtcgtcaatccggatgatgatatgagctttaatcggatcgtgaatgaacctaagcgc
gggattggcaatacaagtgttgctaaactggaagcctttgctaatcagcatgattggtca
ctcttggaagcagcggcaaatgctgagcttagtccgatttcaggcaaagcccgcggcaat
ctagcccaattcggtaaaatgattcaacgacttggtcagcggcggaaagatttgaacgtt
acggaaatgatgcaggcaattctggatgatagcggttatttagggacgttacgtgccgcc
aacaccttggaagccgaaacgcgagtggaaaaccttgaagaacttttgtcagtgacccaa
ggatttgatgcgcgctaccagccagaaaatgaagacagtgatatttttgtcgacttttta
gctgaattggcgctgttgtctgatcaagatgaagttgaagaagatgcccaggaagtgacg
ttgatgacgttgcatgcggctaagggactggaatttccagtggtctttctggtgggcatg
gaagaagggcttttcccgttgagtcgcgcggccatggatgaaggcgagcttgaagaagag
cggcgattggcttacgtcgggatcacccgagcaaaacaaaagttatatttgaccaatgcc
tatgcccggatgttgtatggtcagcgtcaaaataatccggcgagccgttttattgaagaa
attgatcctgaattgcttgatatttccggtgctgcccagccgaaaagtgatataccgttc
atcaaccgcaccgatcgcgcctttagttcgccttatagccgtcatcctgaaaccaccggg
acgccggtaaccgttaaaccggctccaaccactggtgccggtaagacaagctgggaagcc
ggcgataaagtcgaacaccgtaaatggggaatcggtaccgtggtcaaagtaaccggcacc
ggtgacgatcaggaacttgatatagcctttaaagcgatggggattaaacggttattagct
gcgtttgccccgattaaaaaagttgaagcttaa
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