Lacticaseibacillus rhamnosus Lc 705: LC705_01184
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Entry
LC705_01184 CDS
T00990
Symbol
yfiC
Name
(GenBank) ABC transporter, multidrug transporter ATPase and permease components
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC705_01184 (yfiC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrl02000
]
LC705_01184 (yfiC)
Transporters [BR:
lrl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LC705_01184 (yfiC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
AAA_23
AAA_30
Zeta_toxin
SMC_N
AAA
AAA_29
NTPase_1
RsgA_GTPase
DO-GTPase2
AAA_15
AAA_24
Rad17
AAA_16
MMR_HSR1
AAA_18
SRP54
T2SSE
PDZ_5
AAA_28
AAA_5
SPC25
TsaE
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
CAR90023
LinkDB
All DBs
Position
1172109..1173992
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AA seq
627 aa
AA seq
DB search
MADNHKAQTTKQPSGPRMGPGRGGLVEKPKNFWGTTARLFGYMRNRLIGIIAVLVLAIAS
TVFQIRTPKILGEATTEIFKGVMKGQAEQKAGIAVGNYPIDFDKIKQIILIVLVLYLGSA
LFSFLQQFIMTRISQNTVYQLRKDLKHKMKTVPIKYYDTHSNGDIMSRAINDMDNIASTL
QQSLTQMVTSAVMFVGTIWMMLTISWKLTLIALVTIPLGLIVVGIVAPKSQRFFAAQQKA
LGLLNNQVEETYGGQVIIKSFNREDDEVEAFEGQNQAFYDAAWKAQFVSGIIMPLMIFLN
NIGYVFVAIMGGIEVSNGTITLGNVQAFLQYMQQFSQPISQLANLANTIQSTIASAERIF
AVLDEEDMQDEPSGVPAVANDPNKLVMDHVQFGYTPDALLLKDYNLQVKPGEMVAIVGPT
GAGKTTIINLLERFYDISGGSIRLNGTDTRDMKREDVRAHFAMVLQDTWLFTGTIWDNLK
YGREDATDDEVLAAAKAAHVDNFVRQLPDGYNTILNEEASNISQGQRQLLTIARAFVADP
EILILDEATSSVDTRTEIHIQHAMNRLLTDRTSFVVAHRLSTIRDADKIIVMNHGSIVET
GNHDELMAKNGFYADLYNSQFSGNVAI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatcacaaagcccaaacgaccaagcagccatctggcccacggatgggtcct
ggccgtggtggtctcgttgaaaaaccgaagaacttctggggcacaacagcgcggttattt
ggttacatgcgcaaccgtctgattggtattattgcggtgctagtcttggccattgcttcg
accgtctttcaaattcgcacaccaaaaatcttgggggaagctacaaccgagatttttaaa
ggggttatgaaaggccaagcggagcaaaaggccggtatcgctgttggcaactatccaatt
gattttgataagatcaaacagattattttaatcgtcttggttctgtatttgggtagtgca
ctgtttagtttcttacagcagttcatcatgactcggatctcgcagaatacggtttatcaa
ttgcgtaaagatctcaagcacaagatgaagactgtgccgatcaagtattatgacacacat
agtaatggcgatattatgtcacgggcgattaacgatatggataacatcgcctcgacactg
caacaaagtctgacgcagatggtaaccagtgcggttatgttcgtggggaccatttggatg
atgcttacgatttcctggaagttaacgctgattgcattggtaacgattccgctgggctta
attgttgtcgggattgtcgcaccaaaatcgcaacggttctttgccgcccagcaaaaagct
ttaggtctcttgaataatcaagttgaagaaacttatggtggccaggtgatcatcaagagc
tttaatcgtgaagatgatgaagttgaggcatttgaaggccagaaccaggcattttatgat
gcagcgtggaaagcgcagtttgtttccgggatcatcatgccgcttatgattttcctaaac
aacattggttacgtgtttgttgcgattatgggtggcattgaagtttccaatggcacgatc
acccttgggaatgttcaggcgttcctccagtatatgcagcaattttcccagccgatttcc
cagcttgctaacctagccaatacgattcaatccactattgccagtgccgagcggatcttt
gcggtgttggacgaagaagacatgcaggatgagccgtctggtgtgccggcagtggccaat
gatcctaacaaactggtaatggatcatgttcagtttggttataccccggatgccttgttg
ctcaaggactataacctgcaagtcaaaccaggtgagatggtcgcgattgtcgggccgacc
ggtgcagggaaaacaacgatcatcaacctgctagagcgtttttatgatattagcggcgga
tcgattcgcttgaatggtaccgatacccgcgatatgaagcgagaagatgttcgcgcgcat
tttgcgatggtgcttcaggatacttggctgtttaccggcacgatttgggataacttgaaa
tatggccgggaagacgcaactgacgacgaagtattggccgcagccaaagcagcccatgtt
gacaactttgtgcggcagttaccggatggctacaacacgattctgaacgaagaagcctcg
aatatttcgcaaggtcagcgacagttgttgacgatcgctcgagccttcgtggcagatccg
gaaattcttattctggacgaggccaccagctcggtcgatacgcggacggaaattcatatt
cagcacgctatgaaccgcttgctgactgatcgtacgagcttcgtagtcgcccaccggctg
tcaacgattcgtgatgccgacaagattatcgtgatgaatcacggctccattgttgaaacc
gggaatcatgacgaactaatggctaaaaacggcttttatgctgatctgtacaacagtcag
ttcagtggcaatgtcgcgatttaa
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